ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01326:01327

Extra

PDB:
ATOM 1 O3' C A1325 36.536 144.352 86.554 1.00 33.32 O
ATOM 2 P A A1326 37.500 145.336 87.391 1.00 36.41 P
ATOM 3 OP1 A A1326 36.620 146.325 88.072 1.00 36.06 O
ATOM 4 OP2 A A1326 38.607 145.821 86.534 1.00 36.18 O
ATOM 5 O5' A A1326 38.122 144.387 88.510 1.00 36.59 O
ATOM 6 C5' A A1326 37.282 143.810 89.520 1.00 33.96 C
ATOM 7 C4' A A1326 38.020 142.733 90.266 1.00 33.82 C
ATOM 8 O4' A A1326 38.488 141.726 89.332 1.00 35.27 O
ATOM 9 C3' A A1326 39.289 143.158 90.974 1.00 33.64 C
ATOM 10 O3' A A1326 39.018 143.762 92.214 1.00 32.89 O
ATOM 11 C2' A A1326 39.995 141.827 91.155 1.00 35.26 C
ATOM 12 O2' A A1326 39.421 141.051 92.189 1.00 34.82 O
ATOM 13 C1' A A1326 39.702 141.166 89.810 1.00 34.72 C
ATOM 14 N9 A A1326 40.747 141.450 88.833 1.00 34.99 N
ATOM 15 C8 A A1326 40.711 142.349 87.799 1.00 35.25 C
ATOM 16 N7 A A1326 41.792 142.345 87.062 1.00 36.69 N
ATOM 17 C5 A A1326 42.597 141.380 87.655 1.00 33.78 C
ATOM 18 C6 A A1326 43.863 140.877 87.328 1.00 32.27 C
ATOM 19 N6 A A1326 44.564 141.270 86.265 1.00 32.88 N
ATOM 20 N1 A A1326 44.389 139.933 88.131 1.00 31.55 N
ATOM 21 C2 A A1326 43.679 139.518 89.178 1.00 31.78 C
ATOM 22 N3 A A1326 42.472 139.897 89.578 1.00 33.77 N
ATOM 23 C4 A A1326 41.977 140.841 88.760 1.00 34.34 C
ATOM 24 P U A1327 39.816 145.077 92.629 1.00 32.34 P
ATOM 25 OP1 U A1327 39.405 145.419 93.999 1.00 34.83 O
ATOM 26 OP2 U A1327 39.659 146.069 91.550 1.00 33.04 O
ATOM 27 O5' U A1327 41.332 144.611 92.667 1.00 33.31 O
TER

ATOM 1 O3' A B1326 39.018 143.762 92.214 1.00 32.89 O
ATOM 2 P U B1327 39.816 145.077 92.629 1.00 32.34 P
ATOM 3 OP1 U B1327 39.405 145.419 93.999 1.00 34.83 O
ATOM 4 OP2 U B1327 39.659 146.069 91.550 1.00 33.04 O
ATOM 5 O5' U B1327 41.332 144.611 92.667 1.00 33.31 O
ATOM 6 C5' U B1327 41.748 143.511 93.489 1.00 31.28 C
ATOM 7 C4' U B1327 43.153 143.108 93.129 1.00 31.39 C
ATOM 8 O4' U B1327 43.176 142.594 91.775 1.00 31.48 O
ATOM 9 C3' U B1327 44.160 144.244 93.135 1.00 31.95 C
ATOM 10 O3' U B1327 44.653 144.411 94.461 1.00 32.79 O
ATOM 11 C2' U B1327 45.219 143.731 92.169 1.00 32.91 C
ATOM 12 O2' U B1327 46.066 142.778 92.768 1.00 36.82 O
ATOM 13 C1' U B1327 44.357 143.013 91.126 1.00 32.66 C
ATOM 14 N1 U B1327 43.973 143.857 89.984 1.00 34.22 N
ATOM 15 C2 U B1327 44.758 143.806 88.855 1.00 33.64 C
ATOM 16 O2 U B1327 45.727 143.086 88.757 1.00 35.13 O
ATOM 17 N3 U B1327 44.360 144.628 87.838 1.00 34.38 N
ATOM 18 C4 U B1327 43.272 145.469 87.825 1.00 37.26 C
ATOM 19 O4 U B1327 43.002 146.093 86.795 1.00 40.58 O
ATOM 20 C5 U B1327 42.503 145.465 89.027 1.00 36.70 C
ATOM 21 C6 U B1327 42.869 144.680 90.039 1.00 36.23 C
ATOM 22 P A B1328 45.191 145.841 94.960 1.00 31.97 P
ATOM 23 OP1 A B1328 46.448 146.138 94.259 1.00 36.40 O
ATOM 24 OP2 A B1328 45.165 145.827 96.442 1.00 33.14 O
ATOM 25 O5' A B1328 44.126 146.902 94.454 1.00 31.13 O
TER

Atoms:
OP1: (36.620,146.325,88.072)
OP2: (38.607,145.821,86.534)
C3': (39.289,143.158,90.974)
C1': (39.702,141.166,89.810)
C5': (37.282,143.810,89.520)
O4': (38.488,141.726,89.332)
C8: (40.711,142.349,87.799)
O2': (39.421,141.051,92.189)
C6: (43.863,140.877,87.328)
C5: (42.597,141.380,87.655)
C4: (41.977,140.841,88.760)
P: (37.500,145.336,87.391)
C4': (38.020,142.733,90.266)
C2': (39.995,141.827,91.155)
C2: (43.679,139.518,89.178)
N1: (44.389,139.933,88.131)
N3: (42.472,139.897,89.578)
N6: (44.564,141.270,86.265)
N7: (41.792,142.345,87.062)
N9: (40.747,141.450,88.833)
O5': (38.122,144.387,88.510)
O3': (39.018,143.762,92.214)
C4: (43.272,145.469,87.825)
N3: (44.360,144.628,87.838)
OP1: (39.405,145.419,93.999)
OP2: (39.659,146.069,91.550)
C2: (44.758,143.806,88.855)
C1': (44.357,143.013,91.126)
C3': (44.160,144.244,93.135)
O5': (41.332,144.611,92.667)
O4': (43.176,142.594,91.775)
C5': (41.748,143.511,93.489)
P: (39.816,145.077,92.629)
C4': (43.153,143.108,93.129)
C2': (45.219,143.731,92.169)
O2': (46.066,142.778,92.768)
N1: (43.973,143.857,89.984)
O4: (43.002,146.093,86.795)
O2: (45.727,143.086,88.757)
C6: (42.869,144.680,90.039)
C5: (42.503,145.465,89.027)
O3': (44.653,144.411,94.461)
Image (generated by PyMOL):
PyMOL image
show in jmol