Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0220:0221
Extra
PDB:
ATOM 1 O3' G A 219 49.177 95.373 22.990 1.00 55.47 O
ATOM 2 P A A 220 49.058 96.503 21.858 1.00 56.34 P
ATOM 3 OP1 A A 220 47.770 96.313 21.142 1.00 54.94 O
ATOM 4 OP2 A A 220 50.337 96.525 21.093 1.00 55.68 O
ATOM 5 O5' A A 220 48.935 97.832 22.722 1.00 55.04 O
ATOM 6 C5' A A 220 49.349 99.084 22.202 1.00 51.56 C
ATOM 7 C4' A A 220 49.297 100.121 23.281 1.00 51.05 C
ATOM 8 O4' A A 220 50.229 99.779 24.335 1.00 50.65 O
ATOM 9 C3' A A 220 49.751 101.481 22.810 1.00 52.49 C
ATOM 10 O3' A A 220 48.677 102.134 22.150 1.00 53.76 O
ATOM 11 C2' A A 220 50.208 102.140 24.104 1.00 50.98 C
ATOM 12 O2' A A 220 49.142 102.622 24.896 1.00 49.53 O
ATOM 13 C1' A A 220 50.858 100.955 24.817 1.00 49.35 C
ATOM 14 N9 A A 220 52.298 100.823 24.589 1.00 47.61 N
ATOM 15 C8 A A 220 52.953 99.796 23.955 1.00 46.80 C
ATOM 16 N7 A A 220 54.258 99.912 23.969 1.00 47.07 N
ATOM 17 C5 A A 220 54.480 101.104 24.641 1.00 47.17 C
ATOM 18 C6 A A 220 55.659 101.782 25.005 1.00 46.27 C
ATOM 19 N6 A A 220 56.886 101.327 24.749 1.00 44.68 N
ATOM 20 N1 A A 220 55.531 102.953 25.659 1.00 46.01 N
ATOM 21 C2 A A 220 54.299 103.401 25.936 1.00 46.82 C
ATOM 22 N3 A A 220 53.119 102.851 25.663 1.00 46.99 N
ATOM 23 C4 A A 220 53.280 101.689 25.008 1.00 47.67 C
ATOM 24 P U A 221 48.955 102.941 20.796 1.00 52.48 P
ATOM 25 OP1 U A 221 47.616 103.377 20.307 1.00 50.96 O
ATOM 26 OP2 U A 221 49.852 102.147 19.916 1.00 48.51 O
ATOM 27 O5' U A 221 49.750 104.221 21.296 1.00 52.95 O
TER
ATOM 1 O3' A B 220 48.677 102.134 22.150 1.00 53.76 O
ATOM 2 P U B 221 48.955 102.941 20.796 1.00 52.48 P
ATOM 3 OP1 U B 221 47.616 103.377 20.307 1.00 50.96 O
ATOM 4 OP2 U B 221 49.852 102.147 19.916 1.00 48.51 O
ATOM 5 O5' U B 221 49.750 104.221 21.296 1.00 52.95 O
ATOM 6 C5' U B 221 49.152 105.128 22.244 1.00 52.74 C
ATOM 7 C4' U B 221 50.163 106.151 22.679 1.00 52.39 C
ATOM 8 O4' U B 221 51.215 105.517 23.447 1.00 53.27 O
ATOM 9 C3' U B 221 50.907 106.819 21.544 1.00 51.79 C
ATOM 10 O3' U B 221 50.102 107.856 21.020 1.00 53.52 O
ATOM 11 C2' U B 221 52.154 107.333 22.244 1.00 50.56 C
ATOM 12 O2' U B 221 51.874 108.483 23.013 1.00 51.20 O
ATOM 13 C1' U B 221 52.439 106.191 23.222 1.00 49.88 C
ATOM 14 N1 U B 221 53.442 105.214 22.772 1.00 47.42 N
ATOM 15 C2 U B 221 54.783 105.503 23.018 1.00 48.07 C
ATOM 16 O2 U B 221 55.155 106.513 23.599 1.00 48.94 O
ATOM 17 N3 U B 221 55.673 104.564 22.562 1.00 45.89 N
ATOM 18 C4 U B 221 55.373 103.391 21.911 1.00 45.23 C
ATOM 19 O4 U B 221 56.290 102.668 21.523 1.00 44.38 O
ATOM 20 C5 U B 221 53.972 103.156 21.709 1.00 45.46 C
ATOM 21 C6 U B 221 53.079 104.055 22.133 1.00 45.53 C
ATOM 22 P A B 222 49.974 108.037 19.434 1.00 55.19 P
ATOM 23 OP1 A B 222 49.016 109.161 19.219 1.00 52.19 O
ATOM 24 OP2 A B 222 49.722 106.713 18.797 1.00 54.31 O
ATOM 25 O5' A B 222 51.433 108.494 18.998 1.00 55.70 O
TER
ATOM 2 P A A 220 49.058 96.503 21.858 1.00 56.34 P
ATOM 3 OP1 A A 220 47.770 96.313 21.142 1.00 54.94 O
ATOM 4 OP2 A A 220 50.337 96.525 21.093 1.00 55.68 O
ATOM 5 O5' A A 220 48.935 97.832 22.722 1.00 55.04 O
ATOM 6 C5' A A 220 49.349 99.084 22.202 1.00 51.56 C
ATOM 7 C4' A A 220 49.297 100.121 23.281 1.00 51.05 C
ATOM 8 O4' A A 220 50.229 99.779 24.335 1.00 50.65 O
ATOM 9 C3' A A 220 49.751 101.481 22.810 1.00 52.49 C
ATOM 10 O3' A A 220 48.677 102.134 22.150 1.00 53.76 O
ATOM 11 C2' A A 220 50.208 102.140 24.104 1.00 50.98 C
ATOM 12 O2' A A 220 49.142 102.622 24.896 1.00 49.53 O
ATOM 13 C1' A A 220 50.858 100.955 24.817 1.00 49.35 C
ATOM 14 N9 A A 220 52.298 100.823 24.589 1.00 47.61 N
ATOM 15 C8 A A 220 52.953 99.796 23.955 1.00 46.80 C
ATOM 16 N7 A A 220 54.258 99.912 23.969 1.00 47.07 N
ATOM 17 C5 A A 220 54.480 101.104 24.641 1.00 47.17 C
ATOM 18 C6 A A 220 55.659 101.782 25.005 1.00 46.27 C
ATOM 19 N6 A A 220 56.886 101.327 24.749 1.00 44.68 N
ATOM 20 N1 A A 220 55.531 102.953 25.659 1.00 46.01 N
ATOM 21 C2 A A 220 54.299 103.401 25.936 1.00 46.82 C
ATOM 22 N3 A A 220 53.119 102.851 25.663 1.00 46.99 N
ATOM 23 C4 A A 220 53.280 101.689 25.008 1.00 47.67 C
ATOM 24 P U A 221 48.955 102.941 20.796 1.00 52.48 P
ATOM 25 OP1 U A 221 47.616 103.377 20.307 1.00 50.96 O
ATOM 26 OP2 U A 221 49.852 102.147 19.916 1.00 48.51 O
ATOM 27 O5' U A 221 49.750 104.221 21.296 1.00 52.95 O
TER
ATOM 1 O3' A B 220 48.677 102.134 22.150 1.00 53.76 O
ATOM 2 P U B 221 48.955 102.941 20.796 1.00 52.48 P
ATOM 3 OP1 U B 221 47.616 103.377 20.307 1.00 50.96 O
ATOM 4 OP2 U B 221 49.852 102.147 19.916 1.00 48.51 O
ATOM 5 O5' U B 221 49.750 104.221 21.296 1.00 52.95 O
ATOM 6 C5' U B 221 49.152 105.128 22.244 1.00 52.74 C
ATOM 7 C4' U B 221 50.163 106.151 22.679 1.00 52.39 C
ATOM 8 O4' U B 221 51.215 105.517 23.447 1.00 53.27 O
ATOM 9 C3' U B 221 50.907 106.819 21.544 1.00 51.79 C
ATOM 10 O3' U B 221 50.102 107.856 21.020 1.00 53.52 O
ATOM 11 C2' U B 221 52.154 107.333 22.244 1.00 50.56 C
ATOM 12 O2' U B 221 51.874 108.483 23.013 1.00 51.20 O
ATOM 13 C1' U B 221 52.439 106.191 23.222 1.00 49.88 C
ATOM 14 N1 U B 221 53.442 105.214 22.772 1.00 47.42 N
ATOM 15 C2 U B 221 54.783 105.503 23.018 1.00 48.07 C
ATOM 16 O2 U B 221 55.155 106.513 23.599 1.00 48.94 O
ATOM 17 N3 U B 221 55.673 104.564 22.562 1.00 45.89 N
ATOM 18 C4 U B 221 55.373 103.391 21.911 1.00 45.23 C
ATOM 19 O4 U B 221 56.290 102.668 21.523 1.00 44.38 O
ATOM 20 C5 U B 221 53.972 103.156 21.709 1.00 45.46 C
ATOM 21 C6 U B 221 53.079 104.055 22.133 1.00 45.53 C
ATOM 22 P A B 222 49.974 108.037 19.434 1.00 55.19 P
ATOM 23 OP1 A B 222 49.016 109.161 19.219 1.00 52.19 O
ATOM 24 OP2 A B 222 49.722 106.713 18.797 1.00 54.31 O
ATOM 25 O5' A B 222 51.433 108.494 18.998 1.00 55.70 O
TER
Atoms:
OP1: (47.770,96.313,21.142)
OP2: (50.337,96.525,21.093)
C3': (49.751,101.481,22.810)
C1': (50.858,100.955,24.817)
C5': (49.349,99.084,22.202)
O4': (50.229,99.779,24.335)
C8: (52.953,99.796,23.955)
O2': (49.142,102.622,24.896)
C6: (55.659,101.782,25.005)
C5: (54.480,101.104,24.641)
C4: (53.280,101.689,25.008)
P: (49.058,96.503,21.858)
C4': (49.297,100.121,23.281)
C2': (50.208,102.140,24.104)
C2: (54.299,103.401,25.936)
N1: (55.531,102.953,25.659)
N3: (53.119,102.851,25.663)
N6: (56.886,101.327,24.749)
N7: (54.258,99.912,23.969)
N9: (52.298,100.823,24.589)
O5': (48.935,97.832,22.722)
O3': (48.677,102.134,22.150)
OP2: (50.337,96.525,21.093)
C3': (49.751,101.481,22.810)
C1': (50.858,100.955,24.817)
C5': (49.349,99.084,22.202)
O4': (50.229,99.779,24.335)
C8: (52.953,99.796,23.955)
O2': (49.142,102.622,24.896)
C6: (55.659,101.782,25.005)
C5: (54.480,101.104,24.641)
C4: (53.280,101.689,25.008)
P: (49.058,96.503,21.858)
C4': (49.297,100.121,23.281)
C2': (50.208,102.140,24.104)
C2: (54.299,103.401,25.936)
N1: (55.531,102.953,25.659)
N3: (53.119,102.851,25.663)
N6: (56.886,101.327,24.749)
N7: (54.258,99.912,23.969)
N9: (52.298,100.823,24.589)
O5': (48.935,97.832,22.722)
O3': (48.677,102.134,22.150)
C4: (55.373,103.391,21.911)
N3: (55.673,104.564,22.562)
OP1: (47.616,103.377,20.307)
OP2: (49.852,102.147,19.916)
C2: (54.783,105.503,23.018)
C1': (52.439,106.191,23.222)
C3': (50.907,106.819,21.544)
O5': (49.750,104.221,21.296)
O4': (51.215,105.517,23.447)
C5': (49.152,105.128,22.244)
P: (48.955,102.941,20.796)
C4': (50.163,106.151,22.679)
C2': (52.154,107.333,22.244)
O2': (51.874,108.483,23.013)
N1: (53.442,105.214,22.772)
O4: (56.290,102.668,21.523)
O2: (55.155,106.513,23.599)
C6: (53.079,104.055,22.133)
C5: (53.972,103.156,21.709)
O3': (50.102,107.856,21.020)
N3: (55.673,104.564,22.562)
OP1: (47.616,103.377,20.307)
OP2: (49.852,102.147,19.916)
C2: (54.783,105.503,23.018)
C1': (52.439,106.191,23.222)
C3': (50.907,106.819,21.544)
O5': (49.750,104.221,21.296)
O4': (51.215,105.517,23.447)
C5': (49.152,105.128,22.244)
P: (48.955,102.941,20.796)
C4': (50.163,106.151,22.679)
C2': (52.154,107.333,22.244)
O2': (51.874,108.483,23.013)
N1: (53.442,105.214,22.772)
O4: (56.290,102.668,21.523)
O2: (55.155,106.513,23.599)
C6: (53.079,104.055,22.133)
C5: (53.972,103.156,21.709)
O3': (50.102,107.856,21.020)
Image (generated by PyMOL):