Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HJW:E2:E3
Extra
PDB:
ATOM 1 O3' A A 1 10.069 0.497 17.283 1.00 40.08 O
ATOM 2 P G A 2 11.393 -0.374 16.990 1.00 40.28 P
ATOM 3 OP1 G A 2 10.980 -1.513 16.131 1.00 41.07 O
ATOM 4 OP2 G A 2 12.145 -0.583 18.253 1.00 38.06 O
ATOM 5 O5' G A 2 12.231 0.595 16.028 1.00 38.33 O
ATOM 6 C5' G A 2 13.647 0.729 16.140 1.00 33.16 C
ATOM 7 C4' G A 2 14.012 2.024 15.444 1.00 29.76 C
ATOM 8 O4' G A 2 13.532 3.146 16.228 1.00 27.66 O
ATOM 9 C3' G A 2 15.498 2.259 15.302 1.00 27.73 C
ATOM 10 O3' G A 2 15.953 1.665 14.097 1.00 27.62 O
ATOM 11 C2' G A 2 15.598 3.782 15.276 1.00 26.35 C
ATOM 12 O2' G A 2 15.317 4.372 14.022 1.00 25.83 O
ATOM 13 C1' G A 2 14.525 4.153 16.287 1.00 25.01 C
ATOM 14 N9 G A 2 15.070 4.236 17.636 1.00 22.58 N
ATOM 15 C8 G A 2 14.771 3.442 18.716 1.00 21.45 C
ATOM 16 N7 G A 2 15.438 3.768 19.787 1.00 21.66 N
ATOM 17 C5 G A 2 16.225 4.839 19.392 1.00 21.12 C
ATOM 18 C6 G A 2 17.153 5.620 20.114 1.00 21.13 C
ATOM 19 O6 G A 2 17.467 5.495 21.294 1.00 22.62 O
ATOM 20 N1 G A 2 17.750 6.624 19.336 1.00 20.38 N
ATOM 21 C2 G A 2 17.473 6.843 18.004 1.00 19.77 C
ATOM 22 N2 G A 2 18.124 7.850 17.385 1.00 18.99 N
ATOM 23 N3 G A 2 16.596 6.115 17.323 1.00 20.00 N
ATOM 24 C4 G A 2 16.013 5.140 18.068 1.00 21.55 C
ATOM 25 P C A 3 17.422 1.026 14.039 1.00 26.23 P
ATOM 26 OP1 C A 3 17.483 0.318 12.742 1.00 25.39 O
ATOM 27 OP2 C A 3 17.679 0.325 15.320 1.00 23.29 O
ATOM 28 O5' C A 3 18.379 2.321 14.003 1.00 24.51 O
TER
ATOM 1 O3' G B 2 15.953 1.665 14.097 1.00 27.62 O
ATOM 2 P C B 3 17.422 1.026 14.039 1.00 26.23 P
ATOM 3 OP1 C B 3 17.483 0.318 12.742 1.00 25.39 O
ATOM 4 OP2 C B 3 17.679 0.325 15.320 1.00 23.29 O
ATOM 5 O5' C B 3 18.379 2.321 14.003 1.00 24.51 O
ATOM 6 C5' C B 3 18.342 3.320 12.978 1.00 21.53 C
ATOM 7 C4' C B 3 19.295 4.456 13.332 1.00 19.02 C
ATOM 8 O4' C B 3 18.938 5.011 14.616 1.00 19.14 O
ATOM 9 C3' C B 3 20.753 4.050 13.533 1.00 18.62 C
ATOM 10 O3' C B 3 21.374 4.082 12.264 1.00 16.21 O
ATOM 11 C2' C B 3 21.293 5.135 14.465 1.00 17.57 C
ATOM 12 O2' C B 3 21.663 6.309 13.766 1.00 16.46 O
ATOM 13 C1' C B 3 20.082 5.480 15.309 1.00 17.14 C
ATOM 14 N1 C B 3 20.031 4.954 16.709 1.00 16.37 N
ATOM 15 C2 C B 3 20.712 5.606 17.755 1.00 15.72 C
ATOM 16 O2 C B 3 21.406 6.625 17.571 1.00 14.51 O
ATOM 17 N3 C B 3 20.604 5.098 19.000 1.00 15.67 N
ATOM 18 C4 C B 3 19.865 4.018 19.243 1.00 16.95 C
ATOM 19 N4 C B 3 19.804 3.605 20.522 1.00 17.81 N
ATOM 20 C5 C B 3 19.170 3.334 18.202 1.00 17.18 C
ATOM 21 C6 C B 3 19.271 3.839 16.963 1.00 17.45 C
ATOM 22 P G B 4 22.656 3.189 11.979 1.00 16.90 P
ATOM 23 OP1 G B 4 22.950 3.332 10.540 1.00 14.11 O
ATOM 24 OP2 G B 4 22.476 1.846 12.581 1.00 17.67 O
ATOM 25 O5' G B 4 23.770 3.927 12.862 1.00 15.58 O
TER
ATOM 2 P G A 2 11.393 -0.374 16.990 1.00 40.28 P
ATOM 3 OP1 G A 2 10.980 -1.513 16.131 1.00 41.07 O
ATOM 4 OP2 G A 2 12.145 -0.583 18.253 1.00 38.06 O
ATOM 5 O5' G A 2 12.231 0.595 16.028 1.00 38.33 O
ATOM 6 C5' G A 2 13.647 0.729 16.140 1.00 33.16 C
ATOM 7 C4' G A 2 14.012 2.024 15.444 1.00 29.76 C
ATOM 8 O4' G A 2 13.532 3.146 16.228 1.00 27.66 O
ATOM 9 C3' G A 2 15.498 2.259 15.302 1.00 27.73 C
ATOM 10 O3' G A 2 15.953 1.665 14.097 1.00 27.62 O
ATOM 11 C2' G A 2 15.598 3.782 15.276 1.00 26.35 C
ATOM 12 O2' G A 2 15.317 4.372 14.022 1.00 25.83 O
ATOM 13 C1' G A 2 14.525 4.153 16.287 1.00 25.01 C
ATOM 14 N9 G A 2 15.070 4.236 17.636 1.00 22.58 N
ATOM 15 C8 G A 2 14.771 3.442 18.716 1.00 21.45 C
ATOM 16 N7 G A 2 15.438 3.768 19.787 1.00 21.66 N
ATOM 17 C5 G A 2 16.225 4.839 19.392 1.00 21.12 C
ATOM 18 C6 G A 2 17.153 5.620 20.114 1.00 21.13 C
ATOM 19 O6 G A 2 17.467 5.495 21.294 1.00 22.62 O
ATOM 20 N1 G A 2 17.750 6.624 19.336 1.00 20.38 N
ATOM 21 C2 G A 2 17.473 6.843 18.004 1.00 19.77 C
ATOM 22 N2 G A 2 18.124 7.850 17.385 1.00 18.99 N
ATOM 23 N3 G A 2 16.596 6.115 17.323 1.00 20.00 N
ATOM 24 C4 G A 2 16.013 5.140 18.068 1.00 21.55 C
ATOM 25 P C A 3 17.422 1.026 14.039 1.00 26.23 P
ATOM 26 OP1 C A 3 17.483 0.318 12.742 1.00 25.39 O
ATOM 27 OP2 C A 3 17.679 0.325 15.320 1.00 23.29 O
ATOM 28 O5' C A 3 18.379 2.321 14.003 1.00 24.51 O
TER
ATOM 1 O3' G B 2 15.953 1.665 14.097 1.00 27.62 O
ATOM 2 P C B 3 17.422 1.026 14.039 1.00 26.23 P
ATOM 3 OP1 C B 3 17.483 0.318 12.742 1.00 25.39 O
ATOM 4 OP2 C B 3 17.679 0.325 15.320 1.00 23.29 O
ATOM 5 O5' C B 3 18.379 2.321 14.003 1.00 24.51 O
ATOM 6 C5' C B 3 18.342 3.320 12.978 1.00 21.53 C
ATOM 7 C4' C B 3 19.295 4.456 13.332 1.00 19.02 C
ATOM 8 O4' C B 3 18.938 5.011 14.616 1.00 19.14 O
ATOM 9 C3' C B 3 20.753 4.050 13.533 1.00 18.62 C
ATOM 10 O3' C B 3 21.374 4.082 12.264 1.00 16.21 O
ATOM 11 C2' C B 3 21.293 5.135 14.465 1.00 17.57 C
ATOM 12 O2' C B 3 21.663 6.309 13.766 1.00 16.46 O
ATOM 13 C1' C B 3 20.082 5.480 15.309 1.00 17.14 C
ATOM 14 N1 C B 3 20.031 4.954 16.709 1.00 16.37 N
ATOM 15 C2 C B 3 20.712 5.606 17.755 1.00 15.72 C
ATOM 16 O2 C B 3 21.406 6.625 17.571 1.00 14.51 O
ATOM 17 N3 C B 3 20.604 5.098 19.000 1.00 15.67 N
ATOM 18 C4 C B 3 19.865 4.018 19.243 1.00 16.95 C
ATOM 19 N4 C B 3 19.804 3.605 20.522 1.00 17.81 N
ATOM 20 C5 C B 3 19.170 3.334 18.202 1.00 17.18 C
ATOM 21 C6 C B 3 19.271 3.839 16.963 1.00 17.45 C
ATOM 22 P G B 4 22.656 3.189 11.979 1.00 16.90 P
ATOM 23 OP1 G B 4 22.950 3.332 10.540 1.00 14.11 O
ATOM 24 OP2 G B 4 22.476 1.846 12.581 1.00 17.67 O
ATOM 25 O5' G B 4 23.770 3.927 12.862 1.00 15.58 O
TER
Atoms:
OP1: (10.980,-1.513,16.131)
OP2: (12.145,-0.583,18.253)
C3': (15.498,2.259,15.302)
C1': (14.525,4.153,16.287)
C5': (13.647,0.729,16.140)
O6: (17.467,5.495,21.294)
O4': (13.532,3.146,16.228)
C8: (14.771,3.442,18.716)
C2: (17.473,6.843,18.004)
C6: (17.153,5.620,20.114)
C5: (16.225,4.839,19.392)
C4: (16.013,5.140,18.068)
P: (11.393,-0.374,16.990)
C4': (14.012,2.024,15.444)
C2': (15.598,3.782,15.276)
O2': (15.317,4.372,14.022)
N1: (17.750,6.624,19.336)
N2: (18.124,7.850,17.385)
N3: (16.596,6.115,17.323)
N7: (15.438,3.768,19.787)
N9: (15.070,4.236,17.636)
O5': (12.231,0.595,16.028)
O3': (15.953,1.665,14.097)
OP2: (12.145,-0.583,18.253)
C3': (15.498,2.259,15.302)
C1': (14.525,4.153,16.287)
C5': (13.647,0.729,16.140)
O6: (17.467,5.495,21.294)
O4': (13.532,3.146,16.228)
C8: (14.771,3.442,18.716)
C2: (17.473,6.843,18.004)
C6: (17.153,5.620,20.114)
C5: (16.225,4.839,19.392)
C4: (16.013,5.140,18.068)
P: (11.393,-0.374,16.990)
C4': (14.012,2.024,15.444)
C2': (15.598,3.782,15.276)
O2': (15.317,4.372,14.022)
N1: (17.750,6.624,19.336)
N2: (18.124,7.850,17.385)
N3: (16.596,6.115,17.323)
N7: (15.438,3.768,19.787)
N9: (15.070,4.236,17.636)
O5': (12.231,0.595,16.028)
O3': (15.953,1.665,14.097)
C2: (20.712,5.606,17.755)
OP1: (17.483,0.318,12.742)
OP2: (17.679,0.325,15.320)
C4: (19.865,4.018,19.243)
O5': (18.379,2.321,14.003)
C3': (20.753,4.050,13.533)
C1': (20.082,5.480,15.309)
O4': (18.938,5.011,14.616)
C5': (18.342,3.320,12.978)
P: (17.422,1.026,14.039)
O2: (21.406,6.625,17.571)
C4': (19.295,4.456,13.332)
C2': (21.293,5.135,14.465)
O2': (21.663,6.309,13.766)
N1: (20.031,4.954,16.709)
N3: (20.604,5.098,19.000)
N4: (19.804,3.605,20.522)
C6: (19.271,3.839,16.963)
C5: (19.170,3.334,18.202)
O3': (21.374,4.082,12.264)
OP1: (17.483,0.318,12.742)
OP2: (17.679,0.325,15.320)
C4: (19.865,4.018,19.243)
O5': (18.379,2.321,14.003)
C3': (20.753,4.050,13.533)
C1': (20.082,5.480,15.309)
O4': (18.938,5.011,14.616)
C5': (18.342,3.320,12.978)
P: (17.422,1.026,14.039)
O2: (21.406,6.625,17.571)
C4': (19.295,4.456,13.332)
C2': (21.293,5.135,14.465)
O2': (21.663,6.309,13.766)
N1: (20.031,4.954,16.709)
N3: (20.604,5.098,19.000)
N4: (19.804,3.605,20.522)
C6: (19.271,3.839,16.963)
C5: (19.170,3.334,18.202)
O3': (21.374,4.082,12.264)
Image (generated by PyMOL):