Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYW:L8:L9
Extra
PDB:
ATOM 1 O3' U A 7 -26.811 -3.600 -26.299 1.00 40.13 O
ATOM 2 P A A 8 -28.214 -3.092 -26.888 1.00 40.08 P
ATOM 3 OP1 A A 8 -28.097 -1.652 -27.212 1.00 44.55 O
ATOM 4 OP2 A A 8 -29.273 -3.550 -25.959 1.00 36.37 O
ATOM 5 O5' A A 8 -28.357 -3.890 -28.255 1.00 48.82 O
ATOM 6 C5' A A 8 -27.462 -3.648 -29.337 1.00 46.41 C
ATOM 7 C4' A A 8 -27.733 -4.616 -30.462 1.00 47.24 C
ATOM 8 O4' A A 8 -27.328 -5.954 -30.067 1.00 51.60 O
ATOM 9 C3' A A 8 -29.198 -4.766 -30.833 1.00 47.66 C
ATOM 10 O3' A A 8 -29.617 -3.731 -31.713 1.00 44.67 O
ATOM 11 C2' A A 8 -29.219 -6.140 -31.488 1.00 51.65 C
ATOM 12 O2' A A 8 -28.758 -6.134 -32.821 1.00 58.54 O
ATOM 13 C1' A A 8 -28.230 -6.905 -30.607 1.00 56.97 C
ATOM 14 N9 A A 8 -28.893 -7.588 -29.498 1.00 57.11 N
ATOM 15 C8 A A 8 -28.975 -7.184 -28.189 1.00 61.58 C
ATOM 16 N7 A A 8 -29.661 -7.998 -27.426 1.00 66.02 N
ATOM 17 C5 A A 8 -30.054 -9.011 -28.290 1.00 63.04 C
ATOM 18 C6 A A 8 -30.814 -10.176 -28.098 1.00 61.21 C
ATOM 19 N6 A A 8 -31.343 -10.529 -26.924 1.00 64.77 N
ATOM 20 N1 A A 8 -31.017 -10.976 -29.166 1.00 54.33 N
ATOM 21 C2 A A 8 -30.493 -10.618 -30.342 1.00 48.05 C
ATOM 22 N3 A A 8 -29.767 -9.550 -30.650 1.00 54.00 N
ATOM 23 C4 A A 8 -29.581 -8.776 -29.567 1.00 57.22 C
ATOM 24 P U A 9 -31.181 -3.430 -31.890 1.00 57.54 P
ATOM 25 OP1 U A 9 -31.361 -2.212 -32.717 1.00 61.37 O
ATOM 26 OP2 U A 9 -31.793 -3.498 -30.538 1.00 60.69 O
ATOM 27 O5' U A 9 -31.699 -4.661 -32.753 1.00 57.30 O
TER
ATOM 1 O3' A B 8 -29.617 -3.731 -31.713 1.00 44.67 O
ATOM 2 P U B 9 -31.181 -3.430 -31.890 1.00 57.54 P
ATOM 3 OP1 U B 9 -31.361 -2.212 -32.717 1.00 61.37 O
ATOM 4 OP2 U B 9 -31.793 -3.498 -30.538 1.00 60.69 O
ATOM 5 O5' U B 9 -31.699 -4.661 -32.753 1.00 57.30 O
ATOM 6 C5' U B 9 -31.195 -4.887 -34.065 1.00 58.27 C
ATOM 7 C4' U B 9 -31.802 -6.138 -34.641 1.00 58.09 C
ATOM 8 O4' U B 9 -31.381 -7.275 -33.845 1.00 61.95 O
ATOM 9 C3' U B 9 -33.320 -6.170 -34.600 1.00 60.47 C
ATOM 10 O3' U B 9 -33.850 -5.567 -35.770 1.00 56.82 O
ATOM 11 C2' U B 9 -33.610 -7.662 -34.549 1.00 63.76 C
ATOM 12 O2' U B 9 -33.506 -8.268 -35.822 1.00 71.78 O
ATOM 13 C1' U B 9 -32.473 -8.154 -33.652 1.00 61.41 C
ATOM 14 N1 U B 9 -32.788 -8.168 -32.216 1.00 55.19 N
ATOM 15 C2 U B 9 -33.614 -9.163 -31.748 1.00 55.16 C
ATOM 16 O2 U B 9 -34.120 -9.999 -32.476 1.00 61.11 O
ATOM 17 N3 U B 9 -33.831 -9.142 -30.392 1.00 54.15 N
ATOM 18 C4 U B 9 -33.321 -8.240 -29.482 1.00 47.25 C
ATOM 19 O4 U B 9 -33.586 -8.372 -28.287 1.00 46.82 O
ATOM 20 C5 U B 9 -32.491 -7.228 -30.049 1.00 42.03 C
ATOM 21 C6 U B 9 -32.261 -7.225 -31.363 1.00 52.67 C
ATOM 22 P U B 10 -35.313 -4.918 -35.734 1.00 62.95 P
ATOM 23 OP1 U B 10 -35.532 -4.207 -37.018 1.00 73.56 O
ATOM 24 OP2 U B 10 -35.431 -4.174 -34.456 1.00 66.44 O
ATOM 25 O5' U B 10 -36.289 -6.174 -35.690 1.00 60.18 O
TER
ATOM 2 P A A 8 -28.214 -3.092 -26.888 1.00 40.08 P
ATOM 3 OP1 A A 8 -28.097 -1.652 -27.212 1.00 44.55 O
ATOM 4 OP2 A A 8 -29.273 -3.550 -25.959 1.00 36.37 O
ATOM 5 O5' A A 8 -28.357 -3.890 -28.255 1.00 48.82 O
ATOM 6 C5' A A 8 -27.462 -3.648 -29.337 1.00 46.41 C
ATOM 7 C4' A A 8 -27.733 -4.616 -30.462 1.00 47.24 C
ATOM 8 O4' A A 8 -27.328 -5.954 -30.067 1.00 51.60 O
ATOM 9 C3' A A 8 -29.198 -4.766 -30.833 1.00 47.66 C
ATOM 10 O3' A A 8 -29.617 -3.731 -31.713 1.00 44.67 O
ATOM 11 C2' A A 8 -29.219 -6.140 -31.488 1.00 51.65 C
ATOM 12 O2' A A 8 -28.758 -6.134 -32.821 1.00 58.54 O
ATOM 13 C1' A A 8 -28.230 -6.905 -30.607 1.00 56.97 C
ATOM 14 N9 A A 8 -28.893 -7.588 -29.498 1.00 57.11 N
ATOM 15 C8 A A 8 -28.975 -7.184 -28.189 1.00 61.58 C
ATOM 16 N7 A A 8 -29.661 -7.998 -27.426 1.00 66.02 N
ATOM 17 C5 A A 8 -30.054 -9.011 -28.290 1.00 63.04 C
ATOM 18 C6 A A 8 -30.814 -10.176 -28.098 1.00 61.21 C
ATOM 19 N6 A A 8 -31.343 -10.529 -26.924 1.00 64.77 N
ATOM 20 N1 A A 8 -31.017 -10.976 -29.166 1.00 54.33 N
ATOM 21 C2 A A 8 -30.493 -10.618 -30.342 1.00 48.05 C
ATOM 22 N3 A A 8 -29.767 -9.550 -30.650 1.00 54.00 N
ATOM 23 C4 A A 8 -29.581 -8.776 -29.567 1.00 57.22 C
ATOM 24 P U A 9 -31.181 -3.430 -31.890 1.00 57.54 P
ATOM 25 OP1 U A 9 -31.361 -2.212 -32.717 1.00 61.37 O
ATOM 26 OP2 U A 9 -31.793 -3.498 -30.538 1.00 60.69 O
ATOM 27 O5' U A 9 -31.699 -4.661 -32.753 1.00 57.30 O
TER
ATOM 1 O3' A B 8 -29.617 -3.731 -31.713 1.00 44.67 O
ATOM 2 P U B 9 -31.181 -3.430 -31.890 1.00 57.54 P
ATOM 3 OP1 U B 9 -31.361 -2.212 -32.717 1.00 61.37 O
ATOM 4 OP2 U B 9 -31.793 -3.498 -30.538 1.00 60.69 O
ATOM 5 O5' U B 9 -31.699 -4.661 -32.753 1.00 57.30 O
ATOM 6 C5' U B 9 -31.195 -4.887 -34.065 1.00 58.27 C
ATOM 7 C4' U B 9 -31.802 -6.138 -34.641 1.00 58.09 C
ATOM 8 O4' U B 9 -31.381 -7.275 -33.845 1.00 61.95 O
ATOM 9 C3' U B 9 -33.320 -6.170 -34.600 1.00 60.47 C
ATOM 10 O3' U B 9 -33.850 -5.567 -35.770 1.00 56.82 O
ATOM 11 C2' U B 9 -33.610 -7.662 -34.549 1.00 63.76 C
ATOM 12 O2' U B 9 -33.506 -8.268 -35.822 1.00 71.78 O
ATOM 13 C1' U B 9 -32.473 -8.154 -33.652 1.00 61.41 C
ATOM 14 N1 U B 9 -32.788 -8.168 -32.216 1.00 55.19 N
ATOM 15 C2 U B 9 -33.614 -9.163 -31.748 1.00 55.16 C
ATOM 16 O2 U B 9 -34.120 -9.999 -32.476 1.00 61.11 O
ATOM 17 N3 U B 9 -33.831 -9.142 -30.392 1.00 54.15 N
ATOM 18 C4 U B 9 -33.321 -8.240 -29.482 1.00 47.25 C
ATOM 19 O4 U B 9 -33.586 -8.372 -28.287 1.00 46.82 O
ATOM 20 C5 U B 9 -32.491 -7.228 -30.049 1.00 42.03 C
ATOM 21 C6 U B 9 -32.261 -7.225 -31.363 1.00 52.67 C
ATOM 22 P U B 10 -35.313 -4.918 -35.734 1.00 62.95 P
ATOM 23 OP1 U B 10 -35.532 -4.207 -37.018 1.00 73.56 O
ATOM 24 OP2 U B 10 -35.431 -4.174 -34.456 1.00 66.44 O
ATOM 25 O5' U B 10 -36.289 -6.174 -35.690 1.00 60.18 O
TER
Atoms:
OP1: (-28.097,-1.652,-27.212)
OP2: (-29.273,-3.550,-25.959)
C3': (-29.198,-4.766,-30.833)
C1': (-28.230,-6.905,-30.607)
C5': (-27.462,-3.648,-29.337)
O4': (-27.328,-5.954,-30.067)
C8: (-28.975,-7.184,-28.189)
O2': (-28.758,-6.134,-32.821)
C6: (-30.814,-10.176,-28.098)
C5: (-30.054,-9.011,-28.290)
C4: (-29.581,-8.776,-29.567)
P: (-28.214,-3.092,-26.888)
C4': (-27.733,-4.616,-30.462)
C2': (-29.219,-6.140,-31.488)
C2: (-30.493,-10.618,-30.342)
N1: (-31.017,-10.976,-29.166)
N3: (-29.767,-9.550,-30.650)
N6: (-31.343,-10.529,-26.924)
N7: (-29.661,-7.998,-27.426)
N9: (-28.893,-7.588,-29.498)
O5': (-28.357,-3.890,-28.255)
O3': (-29.617,-3.731,-31.713)
OP2: (-29.273,-3.550,-25.959)
C3': (-29.198,-4.766,-30.833)
C1': (-28.230,-6.905,-30.607)
C5': (-27.462,-3.648,-29.337)
O4': (-27.328,-5.954,-30.067)
C8: (-28.975,-7.184,-28.189)
O2': (-28.758,-6.134,-32.821)
C6: (-30.814,-10.176,-28.098)
C5: (-30.054,-9.011,-28.290)
C4: (-29.581,-8.776,-29.567)
P: (-28.214,-3.092,-26.888)
C4': (-27.733,-4.616,-30.462)
C2': (-29.219,-6.140,-31.488)
C2: (-30.493,-10.618,-30.342)
N1: (-31.017,-10.976,-29.166)
N3: (-29.767,-9.550,-30.650)
N6: (-31.343,-10.529,-26.924)
N7: (-29.661,-7.998,-27.426)
N9: (-28.893,-7.588,-29.498)
O5': (-28.357,-3.890,-28.255)
O3': (-29.617,-3.731,-31.713)
C4: (-33.321,-8.240,-29.482)
N3: (-33.831,-9.142,-30.392)
OP1: (-31.361,-2.212,-32.717)
OP2: (-31.793,-3.498,-30.538)
C2: (-33.614,-9.163,-31.748)
C1': (-32.473,-8.154,-33.652)
C3': (-33.320,-6.170,-34.600)
O5': (-31.699,-4.661,-32.753)
O4': (-31.381,-7.275,-33.845)
C5': (-31.195,-4.887,-34.065)
P: (-31.181,-3.430,-31.890)
C4': (-31.802,-6.138,-34.641)
C2': (-33.610,-7.662,-34.549)
O2': (-33.506,-8.268,-35.822)
N1: (-32.788,-8.168,-32.216)
O4: (-33.586,-8.372,-28.287)
O2: (-34.120,-9.999,-32.476)
C6: (-32.261,-7.225,-31.363)
C5: (-32.491,-7.228,-30.049)
O3': (-33.850,-5.567,-35.770)
N3: (-33.831,-9.142,-30.392)
OP1: (-31.361,-2.212,-32.717)
OP2: (-31.793,-3.498,-30.538)
C2: (-33.614,-9.163,-31.748)
C1': (-32.473,-8.154,-33.652)
C3': (-33.320,-6.170,-34.600)
O5': (-31.699,-4.661,-32.753)
O4': (-31.381,-7.275,-33.845)
C5': (-31.195,-4.887,-34.065)
P: (-31.181,-3.430,-31.890)
C4': (-31.802,-6.138,-34.641)
C2': (-33.610,-7.662,-34.549)
O2': (-33.506,-8.268,-35.822)
N1: (-32.788,-8.168,-32.216)
O4: (-33.586,-8.372,-28.287)
O2: (-34.120,-9.999,-32.476)
C6: (-32.261,-7.225,-31.363)
C5: (-32.491,-7.228,-30.049)
O3': (-33.850,-5.567,-35.770)
Image (generated by PyMOL):