Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1119:1143
Extra
PDB:
ATOM 1 O3' A A 118 54.185 -43.699 163.809 1.00 77.04 O
ATOM 2 P A A 119 53.422 -43.102 162.527 1.00 77.20 P
ATOM 3 OP1 A A 119 52.535 -42.017 163.014 1.00 77.18 O
ATOM 4 OP2 A A 119 52.797 -44.243 161.778 1.00 76.88 O
ATOM 5 O5' A A 119 54.630 -42.493 161.690 1.00 76.74 O
ATOM 6 C5' A A 119 54.492 -42.171 160.314 1.00 75.83 C
ATOM 7 C4' A A 119 54.995 -40.784 160.038 1.00 75.49 C
ATOM 8 O4' A A 119 54.617 -40.419 158.689 1.00 74.58 O
ATOM 9 C3' A A 119 54.391 -39.713 160.934 1.00 75.76 C
ATOM 10 O3' A A 119 55.248 -38.572 160.966 1.00 75.71 O
ATOM 11 C2' A A 119 53.132 -39.364 160.171 1.00 75.08 C
ATOM 12 O2' A A 119 52.566 -38.121 160.511 1.00 75.01 O
ATOM 13 C1' A A 119 53.650 -39.384 158.732 1.00 74.30 C
ATOM 14 N9 A A 119 52.609 -39.687 157.753 1.00 73.65 N
ATOM 15 C8 A A 119 52.051 -40.915 157.496 1.00 73.64 C
ATOM 16 N7 A A 119 51.111 -40.888 156.599 1.00 73.00 N
ATOM 17 C5 A A 119 51.049 -39.555 156.264 1.00 72.58 C
ATOM 18 C6 A A 119 50.241 -38.889 155.380 1.00 71.88 C
ATOM 19 N6 A A 119 49.328 -39.536 154.676 1.00 71.49 N
ATOM 20 N1 A A 119 50.402 -37.562 155.255 1.00 71.61 N
ATOM 21 C2 A A 119 51.323 -36.935 155.983 1.00 72.04 C
ATOM 22 N3 A A 119 52.146 -37.464 156.872 1.00 72.72 N
ATOM 23 C4 A A 119 51.955 -38.791 156.953 1.00 72.96 C
ATOM 24 P A A 120 56.505 -38.512 161.969 1.00 71.77 P
ATOM 25 OP1 A A 120 56.080 -39.134 163.268 1.00 72.61 O
ATOM 26 OP2 A A 120 56.977 -37.108 161.968 1.00 71.62 O
ATOM 27 O5' A A 120 57.576 -39.445 161.257 1.00 71.65 O
TER
ATOM 1 O3' G B 142 45.573 -35.650 153.475 1.00 69.97 O
ATOM 2 P U B 143 44.026 -35.908 153.794 1.00 66.28 P
ATOM 3 OP1 U B 143 43.273 -35.501 152.598 1.00 65.51 O
ATOM 4 OP2 U B 143 43.721 -35.256 155.084 1.00 66.88 O
ATOM 5 O5' U B 143 43.973 -37.483 153.960 1.00 66.59 O
ATOM 6 C5' U B 143 44.986 -38.153 154.676 1.00 67.18 C
ATOM 7 C4' U B 143 44.606 -39.563 155.020 1.00 67.56 C
ATOM 8 O4' U B 143 45.780 -40.220 155.563 1.00 68.08 O
ATOM 9 C3' U B 143 43.519 -39.709 156.089 1.00 68.09 C
ATOM 10 O3' U B 143 42.863 -40.961 155.928 1.00 68.16 O
ATOM 11 C2' U B 143 44.335 -39.789 157.357 1.00 68.89 C
ATOM 12 O2' U B 143 43.660 -40.399 158.431 1.00 69.55 O
ATOM 13 C1' U B 143 45.520 -40.631 156.889 1.00 68.87 C
ATOM 14 N1 U B 143 46.732 -40.421 157.679 1.00 69.41 N
ATOM 15 C2 U B 143 47.402 -41.524 158.241 1.00 69.99 C
ATOM 16 O2 U B 143 47.085 -42.699 158.087 1.00 70.08 O
ATOM 17 N3 U B 143 48.496 -41.194 159.010 1.00 70.49 N
ATOM 18 C4 U B 143 48.944 -39.916 159.248 1.00 70.46 C
ATOM 19 O4 U B 143 49.937 -39.782 159.937 1.00 70.96 O
ATOM 20 C5 U B 143 48.204 -38.849 158.650 1.00 69.86 C
ATOM 21 C6 U B 143 47.129 -39.117 157.901 1.00 69.36 C
ATOM 22 P U B 144 41.338 -41.055 155.439 1.00 64.51 P
ATOM 23 OP1 U B 144 40.535 -40.159 156.317 1.00 64.80 O
ATOM 24 OP2 U B 144 41.011 -42.501 155.392 1.00 64.72 O
ATOM 25 O5' U B 144 41.395 -40.448 153.968 1.00 63.60 O
TER
ATOM 2 P A A 119 53.422 -43.102 162.527 1.00 77.20 P
ATOM 3 OP1 A A 119 52.535 -42.017 163.014 1.00 77.18 O
ATOM 4 OP2 A A 119 52.797 -44.243 161.778 1.00 76.88 O
ATOM 5 O5' A A 119 54.630 -42.493 161.690 1.00 76.74 O
ATOM 6 C5' A A 119 54.492 -42.171 160.314 1.00 75.83 C
ATOM 7 C4' A A 119 54.995 -40.784 160.038 1.00 75.49 C
ATOM 8 O4' A A 119 54.617 -40.419 158.689 1.00 74.58 O
ATOM 9 C3' A A 119 54.391 -39.713 160.934 1.00 75.76 C
ATOM 10 O3' A A 119 55.248 -38.572 160.966 1.00 75.71 O
ATOM 11 C2' A A 119 53.132 -39.364 160.171 1.00 75.08 C
ATOM 12 O2' A A 119 52.566 -38.121 160.511 1.00 75.01 O
ATOM 13 C1' A A 119 53.650 -39.384 158.732 1.00 74.30 C
ATOM 14 N9 A A 119 52.609 -39.687 157.753 1.00 73.65 N
ATOM 15 C8 A A 119 52.051 -40.915 157.496 1.00 73.64 C
ATOM 16 N7 A A 119 51.111 -40.888 156.599 1.00 73.00 N
ATOM 17 C5 A A 119 51.049 -39.555 156.264 1.00 72.58 C
ATOM 18 C6 A A 119 50.241 -38.889 155.380 1.00 71.88 C
ATOM 19 N6 A A 119 49.328 -39.536 154.676 1.00 71.49 N
ATOM 20 N1 A A 119 50.402 -37.562 155.255 1.00 71.61 N
ATOM 21 C2 A A 119 51.323 -36.935 155.983 1.00 72.04 C
ATOM 22 N3 A A 119 52.146 -37.464 156.872 1.00 72.72 N
ATOM 23 C4 A A 119 51.955 -38.791 156.953 1.00 72.96 C
ATOM 24 P A A 120 56.505 -38.512 161.969 1.00 71.77 P
ATOM 25 OP1 A A 120 56.080 -39.134 163.268 1.00 72.61 O
ATOM 26 OP2 A A 120 56.977 -37.108 161.968 1.00 71.62 O
ATOM 27 O5' A A 120 57.576 -39.445 161.257 1.00 71.65 O
TER
ATOM 1 O3' G B 142 45.573 -35.650 153.475 1.00 69.97 O
ATOM 2 P U B 143 44.026 -35.908 153.794 1.00 66.28 P
ATOM 3 OP1 U B 143 43.273 -35.501 152.598 1.00 65.51 O
ATOM 4 OP2 U B 143 43.721 -35.256 155.084 1.00 66.88 O
ATOM 5 O5' U B 143 43.973 -37.483 153.960 1.00 66.59 O
ATOM 6 C5' U B 143 44.986 -38.153 154.676 1.00 67.18 C
ATOM 7 C4' U B 143 44.606 -39.563 155.020 1.00 67.56 C
ATOM 8 O4' U B 143 45.780 -40.220 155.563 1.00 68.08 O
ATOM 9 C3' U B 143 43.519 -39.709 156.089 1.00 68.09 C
ATOM 10 O3' U B 143 42.863 -40.961 155.928 1.00 68.16 O
ATOM 11 C2' U B 143 44.335 -39.789 157.357 1.00 68.89 C
ATOM 12 O2' U B 143 43.660 -40.399 158.431 1.00 69.55 O
ATOM 13 C1' U B 143 45.520 -40.631 156.889 1.00 68.87 C
ATOM 14 N1 U B 143 46.732 -40.421 157.679 1.00 69.41 N
ATOM 15 C2 U B 143 47.402 -41.524 158.241 1.00 69.99 C
ATOM 16 O2 U B 143 47.085 -42.699 158.087 1.00 70.08 O
ATOM 17 N3 U B 143 48.496 -41.194 159.010 1.00 70.49 N
ATOM 18 C4 U B 143 48.944 -39.916 159.248 1.00 70.46 C
ATOM 19 O4 U B 143 49.937 -39.782 159.937 1.00 70.96 O
ATOM 20 C5 U B 143 48.204 -38.849 158.650 1.00 69.86 C
ATOM 21 C6 U B 143 47.129 -39.117 157.901 1.00 69.36 C
ATOM 22 P U B 144 41.338 -41.055 155.439 1.00 64.51 P
ATOM 23 OP1 U B 144 40.535 -40.159 156.317 1.00 64.80 O
ATOM 24 OP2 U B 144 41.011 -42.501 155.392 1.00 64.72 O
ATOM 25 O5' U B 144 41.395 -40.448 153.968 1.00 63.60 O
TER
Atoms:
OP1: (52.535,-42.017,163.014)
OP2: (52.797,-44.243,161.778)
C3': (54.391,-39.713,160.934)
C1': (53.650,-39.384,158.732)
C5': (54.492,-42.171,160.314)
O4': (54.617,-40.419,158.689)
C8: (52.051,-40.915,157.496)
O2': (52.566,-38.121,160.511)
C6: (50.241,-38.889,155.380)
C5: (51.049,-39.555,156.264)
C4: (51.955,-38.791,156.953)
P: (53.422,-43.102,162.527)
C4': (54.995,-40.784,160.038)
C2': (53.132,-39.364,160.171)
C2: (51.323,-36.935,155.983)
N1: (50.402,-37.562,155.255)
N3: (52.146,-37.464,156.872)
N6: (49.328,-39.536,154.676)
N7: (51.111,-40.888,156.599)
N9: (52.609,-39.687,157.753)
O5': (54.630,-42.493,161.690)
O3': (55.248,-38.572,160.966)
OP2: (52.797,-44.243,161.778)
C3': (54.391,-39.713,160.934)
C1': (53.650,-39.384,158.732)
C5': (54.492,-42.171,160.314)
O4': (54.617,-40.419,158.689)
C8: (52.051,-40.915,157.496)
O2': (52.566,-38.121,160.511)
C6: (50.241,-38.889,155.380)
C5: (51.049,-39.555,156.264)
C4: (51.955,-38.791,156.953)
P: (53.422,-43.102,162.527)
C4': (54.995,-40.784,160.038)
C2': (53.132,-39.364,160.171)
C2: (51.323,-36.935,155.983)
N1: (50.402,-37.562,155.255)
N3: (52.146,-37.464,156.872)
N6: (49.328,-39.536,154.676)
N7: (51.111,-40.888,156.599)
N9: (52.609,-39.687,157.753)
O5': (54.630,-42.493,161.690)
O3': (55.248,-38.572,160.966)
C4: (48.944,-39.916,159.248)
N3: (48.496,-41.194,159.010)
OP1: (43.273,-35.501,152.598)
OP2: (43.721,-35.256,155.084)
C2: (47.402,-41.524,158.241)
C1': (45.520,-40.631,156.889)
C3': (43.519,-39.709,156.089)
O5': (43.973,-37.483,153.960)
O4': (45.780,-40.220,155.563)
C5': (44.986,-38.153,154.676)
P: (44.026,-35.908,153.794)
C4': (44.606,-39.563,155.020)
C2': (44.335,-39.789,157.357)
O2': (43.660,-40.399,158.431)
N1: (46.732,-40.421,157.679)
O4: (49.937,-39.782,159.937)
O2: (47.085,-42.699,158.087)
C6: (47.129,-39.117,157.901)
C5: (48.204,-38.849,158.650)
O3': (42.863,-40.961,155.928)
N3: (48.496,-41.194,159.010)
OP1: (43.273,-35.501,152.598)
OP2: (43.721,-35.256,155.084)
C2: (47.402,-41.524,158.241)
C1': (45.520,-40.631,156.889)
C3': (43.519,-39.709,156.089)
O5': (43.973,-37.483,153.960)
O4': (45.780,-40.220,155.563)
C5': (44.986,-38.153,154.676)
P: (44.026,-35.908,153.794)
C4': (44.606,-39.563,155.020)
C2': (44.335,-39.789,157.357)
O2': (43.660,-40.399,158.431)
N1: (46.732,-40.421,157.679)
O4: (49.937,-39.782,159.937)
O2: (47.085,-42.699,158.087)
C6: (47.129,-39.117,157.901)
C5: (48.204,-38.849,158.650)
O3': (42.863,-40.961,155.928)
Image (generated by PyMOL):