Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1909:A1910
Extra
PDB:
ATOM 1 O3' U A1908 -102.606 -9.956 -16.990 1.00 50.19 O
ATOM 2 P A A1909 -102.792 -9.865 -15.403 1.00 36.99 P
ATOM 3 OP1 A A1909 -103.479 -11.101 -14.985 1.00 36.99 O
ATOM 4 OP2 A A1909 -103.425 -8.556 -15.107 1.00 36.99 O
ATOM 5 O5' A A1909 -101.303 -9.883 -14.867 1.00 36.99 O
ATOM 6 C5' A A1909 -100.559 -11.079 -14.906 1.00 36.99 C
ATOM 7 C4' A A1909 -99.103 -10.807 -15.088 1.00 36.99 C
ATOM 8 O4' A A1909 -98.901 -9.886 -16.192 1.00 36.99 O
ATOM 9 C3' A A1909 -98.419 -10.135 -13.926 1.00 36.99 C
ATOM 10 O3' A A1909 -98.121 -11.031 -12.884 1.00 36.99 O
ATOM 11 C2' A A1909 -97.196 -9.536 -14.586 1.00 36.99 C
ATOM 12 O2' A A1909 -96.226 -10.531 -14.846 1.00 36.99 O
ATOM 13 C1' A A1909 -97.791 -9.060 -15.911 1.00 36.99 C
ATOM 14 N9 A A1909 -98.264 -7.682 -15.790 1.00 37.66 N
ATOM 15 C8 A A1909 -99.537 -7.185 -15.847 1.00 37.66 C
ATOM 16 N7 A A1909 -99.593 -5.893 -15.623 1.00 37.66 N
ATOM 17 C5 A A1909 -98.273 -5.534 -15.375 1.00 37.66 C
ATOM 18 C6 A A1909 -97.663 -4.307 -15.072 1.00 37.66 C
ATOM 19 N6 A A1909 -98.330 -3.155 -14.956 1.00 37.66 N
ATOM 20 N1 A A1909 -96.323 -4.318 -14.887 1.00 37.66 N
ATOM 21 C2 A A1909 -95.652 -5.480 -14.999 1.00 37.66 C
ATOM 22 N3 A A1909 -96.117 -6.696 -15.285 1.00 37.66 N
ATOM 23 C4 A A1909 -97.447 -6.640 -15.463 1.00 37.66 C
ATOM 24 P U A1910 -98.719 -10.782 -11.417 1.00 30.02 P
ATOM 25 OP1 U A1910 -98.859 -12.125 -10.763 1.00 30.02 O
ATOM 26 OP2 U A1910 -99.937 -9.918 -11.580 1.00 30.02 O
ATOM 27 O5' U A1910 -97.558 -9.957 -10.706 1.00 30.02 O
TER
ATOM 1 O3' A B1909 -98.121 -11.031 -12.884 1.00 36.99 O
ATOM 2 P U B1910 -98.719 -10.782 -11.417 1.00 30.02 P
ATOM 3 OP1 U B1910 -98.859 -12.125 -10.763 1.00 30.02 O
ATOM 4 OP2 U B1910 -99.937 -9.918 -11.580 1.00 30.02 O
ATOM 5 O5' U B1910 -97.558 -9.957 -10.706 1.00 30.02 O
ATOM 6 C5' U B1910 -96.215 -10.394 -10.778 1.00 30.02 C
ATOM 7 C4' U B1910 -95.278 -9.239 -10.936 1.00 30.02 C
ATOM 8 O4' U B1910 -95.691 -8.425 -12.060 1.00 30.02 O
ATOM 9 C3' U B1910 -95.233 -8.266 -9.783 1.00 30.02 C
ATOM 10 O3' U B1910 -94.438 -8.723 -8.718 1.00 30.02 O
ATOM 11 C2' U B1910 -94.687 -7.026 -10.442 1.00 30.02 C
ATOM 12 O2' U B1910 -93.298 -7.156 -10.649 1.00 30.02 O
ATOM 13 C1' U B1910 -95.382 -7.076 -11.800 1.00 30.02 C
ATOM 14 N1 U B1910 -96.642 -6.277 -11.816 1.00 30.05 N
ATOM 15 C2 U B1910 -96.542 -4.920 -11.520 1.00 30.05 C
ATOM 16 O2 U B1910 -95.484 -4.363 -11.260 1.00 30.05 O
ATOM 17 N3 U B1910 -97.723 -4.228 -11.530 1.00 30.05 N
ATOM 18 C4 U B1910 -98.963 -4.721 -11.815 1.00 30.05 C
ATOM 19 O4 U B1910 -99.905 -3.945 -11.790 1.00 30.05 O
ATOM 20 C5 U B1910 -99.017 -6.114 -12.114 1.00 30.05 C
ATOM 21 C6 U B1910 -97.881 -6.825 -12.105 1.00 30.05 C
ATOM 22 P A B1911 -94.870 -8.410 -7.211 1.00 31.13 P
ATOM 23 OP1 A B1911 -93.796 -8.908 -6.325 1.00 31.14 O
ATOM 24 OP2 A B1911 -96.242 -8.926 -7.041 1.00 31.14 O
ATOM 25 O5' A B1911 -94.897 -6.831 -7.176 1.00 31.13 O
TER
ATOM 2 P A A1909 -102.792 -9.865 -15.403 1.00 36.99 P
ATOM 3 OP1 A A1909 -103.479 -11.101 -14.985 1.00 36.99 O
ATOM 4 OP2 A A1909 -103.425 -8.556 -15.107 1.00 36.99 O
ATOM 5 O5' A A1909 -101.303 -9.883 -14.867 1.00 36.99 O
ATOM 6 C5' A A1909 -100.559 -11.079 -14.906 1.00 36.99 C
ATOM 7 C4' A A1909 -99.103 -10.807 -15.088 1.00 36.99 C
ATOM 8 O4' A A1909 -98.901 -9.886 -16.192 1.00 36.99 O
ATOM 9 C3' A A1909 -98.419 -10.135 -13.926 1.00 36.99 C
ATOM 10 O3' A A1909 -98.121 -11.031 -12.884 1.00 36.99 O
ATOM 11 C2' A A1909 -97.196 -9.536 -14.586 1.00 36.99 C
ATOM 12 O2' A A1909 -96.226 -10.531 -14.846 1.00 36.99 O
ATOM 13 C1' A A1909 -97.791 -9.060 -15.911 1.00 36.99 C
ATOM 14 N9 A A1909 -98.264 -7.682 -15.790 1.00 37.66 N
ATOM 15 C8 A A1909 -99.537 -7.185 -15.847 1.00 37.66 C
ATOM 16 N7 A A1909 -99.593 -5.893 -15.623 1.00 37.66 N
ATOM 17 C5 A A1909 -98.273 -5.534 -15.375 1.00 37.66 C
ATOM 18 C6 A A1909 -97.663 -4.307 -15.072 1.00 37.66 C
ATOM 19 N6 A A1909 -98.330 -3.155 -14.956 1.00 37.66 N
ATOM 20 N1 A A1909 -96.323 -4.318 -14.887 1.00 37.66 N
ATOM 21 C2 A A1909 -95.652 -5.480 -14.999 1.00 37.66 C
ATOM 22 N3 A A1909 -96.117 -6.696 -15.285 1.00 37.66 N
ATOM 23 C4 A A1909 -97.447 -6.640 -15.463 1.00 37.66 C
ATOM 24 P U A1910 -98.719 -10.782 -11.417 1.00 30.02 P
ATOM 25 OP1 U A1910 -98.859 -12.125 -10.763 1.00 30.02 O
ATOM 26 OP2 U A1910 -99.937 -9.918 -11.580 1.00 30.02 O
ATOM 27 O5' U A1910 -97.558 -9.957 -10.706 1.00 30.02 O
TER
ATOM 1 O3' A B1909 -98.121 -11.031 -12.884 1.00 36.99 O
ATOM 2 P U B1910 -98.719 -10.782 -11.417 1.00 30.02 P
ATOM 3 OP1 U B1910 -98.859 -12.125 -10.763 1.00 30.02 O
ATOM 4 OP2 U B1910 -99.937 -9.918 -11.580 1.00 30.02 O
ATOM 5 O5' U B1910 -97.558 -9.957 -10.706 1.00 30.02 O
ATOM 6 C5' U B1910 -96.215 -10.394 -10.778 1.00 30.02 C
ATOM 7 C4' U B1910 -95.278 -9.239 -10.936 1.00 30.02 C
ATOM 8 O4' U B1910 -95.691 -8.425 -12.060 1.00 30.02 O
ATOM 9 C3' U B1910 -95.233 -8.266 -9.783 1.00 30.02 C
ATOM 10 O3' U B1910 -94.438 -8.723 -8.718 1.00 30.02 O
ATOM 11 C2' U B1910 -94.687 -7.026 -10.442 1.00 30.02 C
ATOM 12 O2' U B1910 -93.298 -7.156 -10.649 1.00 30.02 O
ATOM 13 C1' U B1910 -95.382 -7.076 -11.800 1.00 30.02 C
ATOM 14 N1 U B1910 -96.642 -6.277 -11.816 1.00 30.05 N
ATOM 15 C2 U B1910 -96.542 -4.920 -11.520 1.00 30.05 C
ATOM 16 O2 U B1910 -95.484 -4.363 -11.260 1.00 30.05 O
ATOM 17 N3 U B1910 -97.723 -4.228 -11.530 1.00 30.05 N
ATOM 18 C4 U B1910 -98.963 -4.721 -11.815 1.00 30.05 C
ATOM 19 O4 U B1910 -99.905 -3.945 -11.790 1.00 30.05 O
ATOM 20 C5 U B1910 -99.017 -6.114 -12.114 1.00 30.05 C
ATOM 21 C6 U B1910 -97.881 -6.825 -12.105 1.00 30.05 C
ATOM 22 P A B1911 -94.870 -8.410 -7.211 1.00 31.13 P
ATOM 23 OP1 A B1911 -93.796 -8.908 -6.325 1.00 31.14 O
ATOM 24 OP2 A B1911 -96.242 -8.926 -7.041 1.00 31.14 O
ATOM 25 O5' A B1911 -94.897 -6.831 -7.176 1.00 31.13 O
TER
Atoms:
OP1: (-103.479,-11.101,-14.985)
OP2: (-103.425,-8.556,-15.107)
C3': (-98.419,-10.135,-13.926)
C1': (-97.791,-9.060,-15.911)
C5': (-100.559,-11.079,-14.906)
O4': (-98.901,-9.886,-16.192)
C8: (-99.537,-7.185,-15.847)
O2': (-96.226,-10.531,-14.846)
C6: (-97.663,-4.307,-15.072)
C5: (-98.273,-5.534,-15.375)
C4: (-97.447,-6.640,-15.463)
P: (-102.792,-9.865,-15.403)
C4': (-99.103,-10.807,-15.088)
C2': (-97.196,-9.536,-14.586)
C2: (-95.652,-5.480,-14.999)
N1: (-96.323,-4.318,-14.887)
N3: (-96.117,-6.696,-15.285)
N6: (-98.330,-3.155,-14.956)
N7: (-99.593,-5.893,-15.623)
N9: (-98.264,-7.682,-15.790)
O5': (-101.303,-9.883,-14.867)
O3': (-98.121,-11.031,-12.884)
OP2: (-103.425,-8.556,-15.107)
C3': (-98.419,-10.135,-13.926)
C1': (-97.791,-9.060,-15.911)
C5': (-100.559,-11.079,-14.906)
O4': (-98.901,-9.886,-16.192)
C8: (-99.537,-7.185,-15.847)
O2': (-96.226,-10.531,-14.846)
C6: (-97.663,-4.307,-15.072)
C5: (-98.273,-5.534,-15.375)
C4: (-97.447,-6.640,-15.463)
P: (-102.792,-9.865,-15.403)
C4': (-99.103,-10.807,-15.088)
C2': (-97.196,-9.536,-14.586)
C2: (-95.652,-5.480,-14.999)
N1: (-96.323,-4.318,-14.887)
N3: (-96.117,-6.696,-15.285)
N6: (-98.330,-3.155,-14.956)
N7: (-99.593,-5.893,-15.623)
N9: (-98.264,-7.682,-15.790)
O5': (-101.303,-9.883,-14.867)
O3': (-98.121,-11.031,-12.884)
C4: (-98.963,-4.721,-11.815)
N3: (-97.723,-4.228,-11.530)
OP1: (-98.859,-12.125,-10.763)
OP2: (-99.937,-9.918,-11.580)
C2: (-96.542,-4.920,-11.520)
C1': (-95.382,-7.076,-11.800)
C3': (-95.233,-8.266,-9.783)
O5': (-97.558,-9.957,-10.706)
O4': (-95.691,-8.425,-12.060)
C5': (-96.215,-10.394,-10.778)
P: (-98.719,-10.782,-11.417)
C4': (-95.278,-9.239,-10.936)
C2': (-94.687,-7.026,-10.442)
O2': (-93.298,-7.156,-10.649)
N1: (-96.642,-6.277,-11.816)
O4: (-99.905,-3.945,-11.790)
O2: (-95.484,-4.363,-11.260)
C6: (-97.881,-6.825,-12.105)
C5: (-99.017,-6.114,-12.114)
O3': (-94.438,-8.723,-8.718)
N3: (-97.723,-4.228,-11.530)
OP1: (-98.859,-12.125,-10.763)
OP2: (-99.937,-9.918,-11.580)
C2: (-96.542,-4.920,-11.520)
C1': (-95.382,-7.076,-11.800)
C3': (-95.233,-8.266,-9.783)
O5': (-97.558,-9.957,-10.706)
O4': (-95.691,-8.425,-12.060)
C5': (-96.215,-10.394,-10.778)
P: (-98.719,-10.782,-11.417)
C4': (-95.278,-9.239,-10.936)
C2': (-94.687,-7.026,-10.442)
O2': (-93.298,-7.156,-10.649)
N1: (-96.642,-6.277,-11.816)
O4: (-99.905,-3.945,-11.790)
O2: (-95.484,-4.363,-11.260)
C6: (-97.881,-6.825,-12.105)
C5: (-99.017,-6.114,-12.114)
O3': (-94.438,-8.723,-8.718)
Image (generated by PyMOL):