ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q3Z:V44:V45

Extra

PDB:
ATOM 1 O3' C A 43 4.371 -10.817 15.032 1.00 69.45 O
ATOM 2 P A A 44 5.518 -10.425 16.082 1.00 64.28 P
ATOM 3 OP1 A A 44 5.456 -11.394 17.197 1.00 71.42 O
ATOM 4 OP2 A A 44 5.441 -8.977 16.363 1.00 65.51 O
ATOM 5 O5' A A 44 6.852 -10.692 15.253 1.00 71.51 O
ATOM 6 C5' A A 44 7.260 -12.022 14.968 1.00 75.04 C
ATOM 7 C4' A A 44 8.550 -12.020 14.173 1.00 76.32 C
ATOM 8 O4' A A 44 8.353 -11.369 12.893 1.00 75.32 O
ATOM 9 C3' A A 44 9.687 -11.233 14.799 1.00 75.65 C
ATOM 10 O3' A A 44 10.315 -11.964 15.842 1.00 78.44 O
ATOM 11 C2' A A 44 10.578 -11.006 13.589 1.00 74.88 C
ATOM 12 O2' A A 44 11.295 -12.159 13.192 1.00 78.29 O
ATOM 13 C1' A A 44 9.524 -10.641 12.551 1.00 73.64 C
ATOM 14 N9 A A 44 9.180 -9.221 12.477 1.00 69.13 N
ATOM 15 C8 A A 44 8.139 -8.574 13.097 1.00 67.85 C
ATOM 16 N7 A A 44 8.063 -7.294 12.822 1.00 61.49 N
ATOM 17 C5 A A 44 9.124 -7.086 11.958 1.00 65.26 C
ATOM 18 C6 A A 44 9.591 -5.931 11.298 1.00 61.71 C
ATOM 19 N6 A A 44 9.012 -4.738 11.435 1.00 58.19 N
ATOM 20 N1 A A 44 10.678 -6.057 10.501 1.00 62.49 N
ATOM 21 C2 A A 44 11.255 -7.266 10.377 1.00 64.87 C
ATOM 22 N3 A A 44 10.904 -8.424 10.945 1.00 65.42 N
ATOM 23 C4 A A 44 9.822 -8.262 11.731 1.00 66.01 C
ATOM 24 P U A 45 10.982 -11.173 17.063 1.00 83.30 P
ATOM 25 OP1 U A 45 11.365 -12.163 18.096 1.00 80.90 O
ATOM 26 OP2 U A 45 10.110 -10.030 17.421 1.00 72.52 O
ATOM 27 O5' U A 45 12.302 -10.581 16.389 1.00 81.28 O
TER

ATOM 1 O3' A B 44 10.315 -11.964 15.842 1.00 78.44 O
ATOM 2 P U B 45 10.982 -11.173 17.063 1.00 83.30 P
ATOM 3 OP1 U B 45 11.365 -12.163 18.096 1.00 80.90 O
ATOM 4 OP2 U B 45 10.110 -10.030 17.421 1.00 72.52 O
ATOM 5 O5' U B 45 12.302 -10.581 16.389 1.00 81.28 O
ATOM 6 C5' U B 45 13.308 -11.446 15.880 1.00 80.84 C
ATOM 7 C4' U B 45 14.384 -10.641 15.178 1.00 82.77 C
ATOM 8 O4' U B 45 13.844 -10.021 13.979 1.00 80.21 O
ATOM 9 C3' U B 45 14.953 -9.467 15.969 1.00 80.35 C
ATOM 10 O3' U B 45 15.902 -9.893 16.944 1.00 81.18 O
ATOM 11 C2' U B 45 15.568 -8.653 14.839 1.00 79.69 C
ATOM 12 O2' U B 45 16.792 -9.180 14.366 1.00 75.03 O
ATOM 13 C1' U B 45 14.475 -8.764 13.776 1.00 80.11 C
ATOM 14 N1 U B 45 13.452 -7.648 13.843 1.00 80.26 N
ATOM 15 C2 U B 45 13.682 -6.478 13.143 1.00 75.17 C
ATOM 16 O2 U B 45 14.670 -6.282 12.464 1.00 80.71 O
ATOM 17 N3 U B 45 12.699 -5.528 13.258 1.00 76.08 N
ATOM 18 C4 U B 45 11.529 -5.612 13.989 1.00 71.27 C
ATOM 19 O4 U B 45 10.747 -4.666 13.993 1.00 68.78 O
ATOM 20 C5 U B 45 11.349 -6.852 14.697 1.00 72.49 C
ATOM 21 C6 U B 45 12.296 -7.797 14.598 1.00 79.27 C
ATOM 22 P U B 46 16.195 -9.025 18.262 1.00 82.25 P
ATOM 23 OP1 U B 46 17.251 -9.730 19.024 1.00 84.56 O
ATOM 24 OP2 U B 46 14.913 -8.686 18.917 1.00 77.65 O
ATOM 25 O5' U B 46 16.785 -7.666 17.666 1.00 81.37 O
TER

Atoms:
OP1: (5.456,-11.394,17.197)
OP2: (5.441,-8.977,16.363)
C3': (9.687,-11.233,14.799)
C1': (9.524,-10.641,12.551)
C5': (7.260,-12.022,14.968)
O4': (8.353,-11.369,12.893)
C8: (8.139,-8.574,13.097)
O2': (11.295,-12.159,13.192)
C6: (9.591,-5.931,11.298)
C5: (9.124,-7.086,11.958)
C4: (9.822,-8.262,11.731)
P: (5.518,-10.425,16.082)
C4': (8.550,-12.020,14.173)
C2': (10.578,-11.006,13.589)
C2: (11.255,-7.266,10.377)
N1: (10.678,-6.057,10.501)
N3: (10.904,-8.424,10.945)
N6: (9.012,-4.738,11.435)
N7: (8.063,-7.294,12.822)
N9: (9.180,-9.221,12.477)
O5': (6.852,-10.692,15.253)
O3': (10.315,-11.964,15.842)
C4: (11.529,-5.612,13.989)
N3: (12.699,-5.528,13.258)
OP1: (11.365,-12.163,18.096)
OP2: (10.110,-10.030,17.421)
C2: (13.682,-6.478,13.143)
C1': (14.475,-8.764,13.776)
C3': (14.953,-9.467,15.969)
O5': (12.302,-10.581,16.389)
O4': (13.844,-10.021,13.979)
C5': (13.308,-11.446,15.880)
P: (10.982,-11.173,17.063)
C4': (14.384,-10.641,15.178)
C2': (15.568,-8.653,14.839)
O2': (16.792,-9.180,14.366)
N1: (13.452,-7.648,13.843)
O4: (10.747,-4.666,13.993)
O2: (14.670,-6.282,12.464)
C6: (12.296,-7.797,14.598)
C5: (11.349,-6.852,14.697)
O3': (15.902,-9.893,16.944)
Image (generated by PyMOL):
PyMOL image
show in jmol