ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01817:01818

Extra

PDB:
ATOM 1 O3' A A1816 114.868 120.837 57.183 1.00 34.63 O
ATOM 2 P A A1817 113.364 120.550 57.683 1.00 33.22 P
ATOM 3 OP1 A A1817 113.122 119.093 57.570 1.00 33.45 O
ATOM 4 OP2 A A1817 112.483 121.494 56.963 1.00 33.46 O
ATOM 5 O5' A A1817 113.357 120.962 59.227 1.00 31.41 O
ATOM 6 C5' A A1817 114.094 120.207 60.218 1.00 29.33 C
ATOM 7 C4' A A1817 113.931 120.838 61.582 1.00 28.12 C
ATOM 8 O4' A A1817 114.486 122.173 61.538 1.00 27.94 O
ATOM 9 C3' A A1817 112.489 121.042 62.021 1.00 29.91 C
ATOM 10 O3' A A1817 111.937 119.890 62.648 1.00 33.37 O
ATOM 11 C2' A A1817 112.584 122.230 62.962 1.00 27.97 C
ATOM 12 O2' A A1817 113.020 121.874 64.256 1.00 28.10 O
ATOM 13 C1' A A1817 113.652 123.069 62.260 1.00 27.86 C
ATOM 14 N9 A A1817 113.086 124.027 61.309 1.00 25.66 N
ATOM 15 C8 A A1817 113.019 123.911 59.939 1.00 24.72 C
ATOM 16 N7 A A1817 112.444 124.930 59.351 1.00 23.85 N
ATOM 17 C5 A A1817 112.114 125.779 60.399 1.00 22.67 C
ATOM 18 C6 A A1817 111.479 127.033 60.437 1.00 21.83 C
ATOM 19 N6 A A1817 111.052 127.683 59.353 1.00 22.62 N
ATOM 20 N1 A A1817 111.295 127.605 61.641 1.00 20.31 N
ATOM 21 C2 A A1817 111.723 126.959 62.725 1.00 22.35 C
ATOM 22 N3 A A1817 112.336 125.782 62.821 1.00 22.58 N
ATOM 23 C4 A A1817 112.504 125.236 61.609 1.00 23.42 C
ATOM 24 P U A1818 110.441 119.434 62.285 1.00 33.98 P
ATOM 25 OP1 U A1818 110.084 118.325 63.189 1.00 34.91 O
ATOM 26 OP2 U A1818 110.373 119.239 60.808 1.00 33.20 O
ATOM 27 O5' U A1818 109.562 120.694 62.695 1.00 32.97 O
TER

ATOM 1 O3' A B1817 111.937 119.890 62.648 1.00 33.37 O
ATOM 2 P U B1818 110.441 119.434 62.285 1.00 33.98 P
ATOM 3 OP1 U B1818 110.084 118.325 63.189 1.00 34.91 O
ATOM 4 OP2 U B1818 110.373 119.239 60.808 1.00 33.20 O
ATOM 5 O5' U B1818 109.562 120.694 62.695 1.00 32.97 O
ATOM 6 C5' U B1818 109.492 121.096 64.069 1.00 33.65 C
ATOM 7 C4' U B1818 108.661 122.345 64.227 1.00 32.29 C
ATOM 8 O4' U B1818 109.360 123.498 63.695 1.00 31.73 O
ATOM 9 C3' U B1818 107.329 122.387 63.507 1.00 31.58 C
ATOM 10 O3' U B1818 106.339 121.611 64.158 1.00 33.40 O
ATOM 11 C2' U B1818 107.024 123.874 63.554 1.00 30.91 C
ATOM 12 O2' U B1818 106.604 124.281 64.839 1.00 31.56 O
ATOM 13 C1' U B1818 108.410 124.465 63.276 1.00 29.26 C
ATOM 14 N1 U B1818 108.612 124.747 61.848 1.00 25.72 N
ATOM 15 C2 U B1818 108.110 125.936 61.356 1.00 25.92 C
ATOM 16 O2 U B1818 107.546 126.758 62.055 1.00 25.93 O
ATOM 17 N3 U B1818 108.288 126.129 60.011 1.00 27.24 N
ATOM 18 C4 U B1818 108.909 125.279 59.124 1.00 27.80 C
ATOM 19 O4 U B1818 108.986 125.594 57.932 1.00 27.47 O
ATOM 20 C5 U B1818 109.415 124.076 59.712 1.00 28.23 C
ATOM 21 C6 U B1818 109.256 123.860 61.022 1.00 26.25 C
ATOM 22 P C B1819 105.252 120.817 63.281 1.00 34.15 P
ATOM 23 OP1 C B1819 104.467 119.979 64.224 1.00 31.51 O
ATOM 24 OP2 C B1819 105.965 120.171 62.155 1.00 34.49 O
ATOM 25 O5' C B1819 104.329 121.982 62.703 1.00 31.44 O
TER

Atoms:
OP1: (113.122,119.093,57.570)
OP2: (112.483,121.494,56.963)
C3': (112.489,121.042,62.021)
C1': (113.652,123.069,62.260)
C5': (114.094,120.207,60.218)
O4': (114.486,122.173,61.538)
C8: (113.019,123.911,59.939)
O2': (113.020,121.874,64.256)
C6: (111.479,127.033,60.437)
C5: (112.114,125.779,60.399)
C4: (112.504,125.236,61.609)
P: (113.364,120.550,57.683)
C4': (113.931,120.838,61.582)
C2': (112.584,122.230,62.962)
C2: (111.723,126.959,62.725)
N1: (111.295,127.605,61.641)
N3: (112.336,125.782,62.821)
N6: (111.052,127.683,59.353)
N7: (112.444,124.930,59.351)
N9: (113.086,124.027,61.309)
O5': (113.357,120.962,59.227)
O3': (111.937,119.890,62.648)
C4: (108.909,125.279,59.124)
N3: (108.288,126.129,60.011)
OP1: (110.084,118.325,63.189)
OP2: (110.373,119.239,60.808)
C2: (108.110,125.936,61.356)
C1': (108.410,124.465,63.276)
C3': (107.329,122.387,63.507)
O5': (109.562,120.694,62.695)
O4': (109.360,123.498,63.695)
C5': (109.492,121.096,64.069)
P: (110.441,119.434,62.285)
C4': (108.661,122.345,64.227)
C2': (107.024,123.874,63.554)
O2': (106.604,124.281,64.839)
N1: (108.612,124.747,61.848)
O4: (108.986,125.594,57.932)
O2: (107.546,126.758,62.055)
C6: (109.256,123.860,61.022)
C5: (109.415,124.076,59.712)
O3': (106.339,121.611,64.158)
Image (generated by PyMOL):
PyMOL image
show in jmol