Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYW:I8:I9
Extra
PDB:
ATOM 1 O3' U A 7 -35.487 6.917 -24.699 1.00 45.81 O
ATOM 2 P A A 8 -35.333 5.407 -24.176 1.00 41.36 P
ATOM 3 OP1 A A 8 -33.890 5.131 -23.966 1.00 32.96 O
ATOM 4 OP2 A A 8 -36.120 4.540 -25.086 1.00 46.72 O
ATOM 5 O5' A A 8 -36.069 5.423 -22.763 1.00 37.23 O
ATOM 6 C5' A A 8 -35.611 6.268 -21.715 1.00 27.05 C
ATOM 7 C4' A A 8 -36.594 6.262 -20.571 1.00 34.08 C
ATOM 8 O4' A A 8 -37.863 6.796 -21.030 1.00 45.71 O
ATOM 9 C3' A A 8 -36.965 4.899 -20.015 1.00 35.60 C
ATOM 10 O3' A A 8 -35.993 4.417 -19.096 1.00 34.62 O
ATOM 11 C2' A A 8 -38.291 5.197 -19.330 1.00 40.75 C
ATOM 12 O2' A A 8 -38.128 5.849 -18.083 1.00 34.56 O
ATOM 13 C1' A A 8 -38.925 6.164 -20.330 1.00 44.76 C
ATOM 14 N9 A A 8 -39.798 5.508 -21.307 1.00 42.11 N
ATOM 15 C8 A A 8 -39.503 5.163 -22.602 1.00 42.27 C
ATOM 16 N7 A A 8 -40.508 4.615 -23.245 1.00 36.47 N
ATOM 17 C5 A A 8 -41.530 4.593 -22.309 1.00 24.20 C
ATOM 18 C6 A A 8 -42.856 4.145 -22.372 1.00 24.93 C
ATOM 19 N6 A A 8 -43.406 3.622 -23.467 1.00 24.70 N
ATOM 20 N1 A A 8 -43.612 4.258 -21.260 1.00 23.55 N
ATOM 21 C2 A A 8 -43.062 4.790 -20.165 1.00 29.40 C
ATOM 22 N3 A A 8 -41.829 5.254 -19.982 1.00 31.24 N
ATOM 23 C4 A A 8 -41.104 5.127 -21.107 1.00 33.94 C
ATOM 24 P U A 9 -35.835 2.833 -18.869 1.00 40.60 P
ATOM 25 OP1 U A 9 -34.657 2.611 -17.991 1.00 33.43 O
ATOM 26 OP2 U A 9 -35.884 2.176 -20.202 1.00 26.45 O
ATOM 27 O5' U A 9 -37.161 2.428 -18.079 1.00 22.46 O
TER
ATOM 1 O3' A B 8 -35.993 4.417 -19.096 1.00 34.62 O
ATOM 2 P U B 9 -35.835 2.833 -18.869 1.00 40.60 P
ATOM 3 OP1 U B 9 -34.657 2.611 -17.991 1.00 33.43 O
ATOM 4 OP2 U B 9 -35.884 2.176 -20.202 1.00 26.45 O
ATOM 5 O5' U B 9 -37.161 2.428 -18.079 1.00 22.46 O
ATOM 6 C5' U B 9 -37.381 2.876 -16.748 1.00 15.93 C
ATOM 7 C4' U B 9 -38.746 2.444 -16.266 1.00 32.17 C
ATOM 8 O4' U B 9 -39.783 3.127 -17.026 1.00 38.25 O
ATOM 9 C3' U B 9 -39.092 0.978 -16.444 1.00 31.42 C
ATOM 10 O3' U B 9 -38.531 0.168 -15.424 1.00 40.89 O
ATOM 11 C2' U B 9 -40.610 1.014 -16.358 1.00 33.44 C
ATOM 12 O2' U B 9 -41.071 1.171 -15.032 1.00 27.88 O
ATOM 13 C1' U B 9 -40.914 2.277 -17.164 1.00 36.38 C
ATOM 14 N1 U B 9 -41.076 1.961 -18.589 1.00 43.51 N
ATOM 15 C2 U B 9 -42.295 1.455 -19.008 1.00 34.78 C
ATOM 16 O2 U B 9 -43.246 1.299 -18.256 1.00 36.77 O
ATOM 17 N3 U B 9 -42.358 1.139 -20.342 1.00 25.37 N
ATOM 18 C4 U B 9 -41.351 1.280 -21.280 1.00 35.73 C
ATOM 19 O4 U B 9 -41.540 0.899 -22.437 1.00 37.49 O
ATOM 20 C5 U B 9 -40.135 1.830 -20.772 1.00 39.60 C
ATOM 21 C6 U B 9 -40.041 2.145 -19.477 1.00 48.38 C
ATOM 22 P U B 10 -38.177 -1.366 -15.743 1.00 45.15 P
ATOM 23 OP1 U B 10 -37.309 -1.883 -14.658 1.00 45.56 O
ATOM 24 OP2 U B 10 -37.707 -1.429 -17.150 1.00 38.86 O
ATOM 25 O5' U B 10 -39.584 -2.109 -15.669 1.00 38.99 O
TER
ATOM 2 P A A 8 -35.333 5.407 -24.176 1.00 41.36 P
ATOM 3 OP1 A A 8 -33.890 5.131 -23.966 1.00 32.96 O
ATOM 4 OP2 A A 8 -36.120 4.540 -25.086 1.00 46.72 O
ATOM 5 O5' A A 8 -36.069 5.423 -22.763 1.00 37.23 O
ATOM 6 C5' A A 8 -35.611 6.268 -21.715 1.00 27.05 C
ATOM 7 C4' A A 8 -36.594 6.262 -20.571 1.00 34.08 C
ATOM 8 O4' A A 8 -37.863 6.796 -21.030 1.00 45.71 O
ATOM 9 C3' A A 8 -36.965 4.899 -20.015 1.00 35.60 C
ATOM 10 O3' A A 8 -35.993 4.417 -19.096 1.00 34.62 O
ATOM 11 C2' A A 8 -38.291 5.197 -19.330 1.00 40.75 C
ATOM 12 O2' A A 8 -38.128 5.849 -18.083 1.00 34.56 O
ATOM 13 C1' A A 8 -38.925 6.164 -20.330 1.00 44.76 C
ATOM 14 N9 A A 8 -39.798 5.508 -21.307 1.00 42.11 N
ATOM 15 C8 A A 8 -39.503 5.163 -22.602 1.00 42.27 C
ATOM 16 N7 A A 8 -40.508 4.615 -23.245 1.00 36.47 N
ATOM 17 C5 A A 8 -41.530 4.593 -22.309 1.00 24.20 C
ATOM 18 C6 A A 8 -42.856 4.145 -22.372 1.00 24.93 C
ATOM 19 N6 A A 8 -43.406 3.622 -23.467 1.00 24.70 N
ATOM 20 N1 A A 8 -43.612 4.258 -21.260 1.00 23.55 N
ATOM 21 C2 A A 8 -43.062 4.790 -20.165 1.00 29.40 C
ATOM 22 N3 A A 8 -41.829 5.254 -19.982 1.00 31.24 N
ATOM 23 C4 A A 8 -41.104 5.127 -21.107 1.00 33.94 C
ATOM 24 P U A 9 -35.835 2.833 -18.869 1.00 40.60 P
ATOM 25 OP1 U A 9 -34.657 2.611 -17.991 1.00 33.43 O
ATOM 26 OP2 U A 9 -35.884 2.176 -20.202 1.00 26.45 O
ATOM 27 O5' U A 9 -37.161 2.428 -18.079 1.00 22.46 O
TER
ATOM 1 O3' A B 8 -35.993 4.417 -19.096 1.00 34.62 O
ATOM 2 P U B 9 -35.835 2.833 -18.869 1.00 40.60 P
ATOM 3 OP1 U B 9 -34.657 2.611 -17.991 1.00 33.43 O
ATOM 4 OP2 U B 9 -35.884 2.176 -20.202 1.00 26.45 O
ATOM 5 O5' U B 9 -37.161 2.428 -18.079 1.00 22.46 O
ATOM 6 C5' U B 9 -37.381 2.876 -16.748 1.00 15.93 C
ATOM 7 C4' U B 9 -38.746 2.444 -16.266 1.00 32.17 C
ATOM 8 O4' U B 9 -39.783 3.127 -17.026 1.00 38.25 O
ATOM 9 C3' U B 9 -39.092 0.978 -16.444 1.00 31.42 C
ATOM 10 O3' U B 9 -38.531 0.168 -15.424 1.00 40.89 O
ATOM 11 C2' U B 9 -40.610 1.014 -16.358 1.00 33.44 C
ATOM 12 O2' U B 9 -41.071 1.171 -15.032 1.00 27.88 O
ATOM 13 C1' U B 9 -40.914 2.277 -17.164 1.00 36.38 C
ATOM 14 N1 U B 9 -41.076 1.961 -18.589 1.00 43.51 N
ATOM 15 C2 U B 9 -42.295 1.455 -19.008 1.00 34.78 C
ATOM 16 O2 U B 9 -43.246 1.299 -18.256 1.00 36.77 O
ATOM 17 N3 U B 9 -42.358 1.139 -20.342 1.00 25.37 N
ATOM 18 C4 U B 9 -41.351 1.280 -21.280 1.00 35.73 C
ATOM 19 O4 U B 9 -41.540 0.899 -22.437 1.00 37.49 O
ATOM 20 C5 U B 9 -40.135 1.830 -20.772 1.00 39.60 C
ATOM 21 C6 U B 9 -40.041 2.145 -19.477 1.00 48.38 C
ATOM 22 P U B 10 -38.177 -1.366 -15.743 1.00 45.15 P
ATOM 23 OP1 U B 10 -37.309 -1.883 -14.658 1.00 45.56 O
ATOM 24 OP2 U B 10 -37.707 -1.429 -17.150 1.00 38.86 O
ATOM 25 O5' U B 10 -39.584 -2.109 -15.669 1.00 38.99 O
TER
Atoms:
OP1: (-33.890,5.131,-23.966)
OP2: (-36.120,4.540,-25.086)
C3': (-36.965,4.899,-20.015)
C1': (-38.925,6.164,-20.330)
C5': (-35.611,6.268,-21.715)
O4': (-37.863,6.796,-21.030)
C8: (-39.503,5.163,-22.602)
O2': (-38.128,5.849,-18.083)
C6: (-42.856,4.145,-22.372)
C5: (-41.530,4.593,-22.309)
C4: (-41.104,5.127,-21.107)
P: (-35.333,5.407,-24.176)
C4': (-36.594,6.262,-20.571)
C2': (-38.291,5.197,-19.330)
C2: (-43.062,4.790,-20.165)
N1: (-43.612,4.258,-21.260)
N3: (-41.829,5.254,-19.982)
N6: (-43.406,3.622,-23.467)
N7: (-40.508,4.615,-23.245)
N9: (-39.798,5.508,-21.307)
O5': (-36.069,5.423,-22.763)
O3': (-35.993,4.417,-19.096)
OP2: (-36.120,4.540,-25.086)
C3': (-36.965,4.899,-20.015)
C1': (-38.925,6.164,-20.330)
C5': (-35.611,6.268,-21.715)
O4': (-37.863,6.796,-21.030)
C8: (-39.503,5.163,-22.602)
O2': (-38.128,5.849,-18.083)
C6: (-42.856,4.145,-22.372)
C5: (-41.530,4.593,-22.309)
C4: (-41.104,5.127,-21.107)
P: (-35.333,5.407,-24.176)
C4': (-36.594,6.262,-20.571)
C2': (-38.291,5.197,-19.330)
C2: (-43.062,4.790,-20.165)
N1: (-43.612,4.258,-21.260)
N3: (-41.829,5.254,-19.982)
N6: (-43.406,3.622,-23.467)
N7: (-40.508,4.615,-23.245)
N9: (-39.798,5.508,-21.307)
O5': (-36.069,5.423,-22.763)
O3': (-35.993,4.417,-19.096)
C4: (-41.351,1.280,-21.280)
N3: (-42.358,1.139,-20.342)
OP1: (-34.657,2.611,-17.991)
OP2: (-35.884,2.176,-20.202)
C2: (-42.295,1.455,-19.008)
C1': (-40.914,2.277,-17.164)
C3': (-39.092,0.978,-16.444)
O5': (-37.161,2.428,-18.079)
O4': (-39.783,3.127,-17.026)
C5': (-37.381,2.876,-16.748)
P: (-35.835,2.833,-18.869)
C4': (-38.746,2.444,-16.266)
C2': (-40.610,1.014,-16.358)
O2': (-41.071,1.171,-15.032)
N1: (-41.076,1.961,-18.589)
O4: (-41.540,0.899,-22.437)
O2: (-43.246,1.299,-18.256)
C6: (-40.041,2.145,-19.477)
C5: (-40.135,1.830,-20.772)
O3': (-38.531,0.168,-15.424)
N3: (-42.358,1.139,-20.342)
OP1: (-34.657,2.611,-17.991)
OP2: (-35.884,2.176,-20.202)
C2: (-42.295,1.455,-19.008)
C1': (-40.914,2.277,-17.164)
C3': (-39.092,0.978,-16.444)
O5': (-37.161,2.428,-18.079)
O4': (-39.783,3.127,-17.026)
C5': (-37.381,2.876,-16.748)
P: (-35.835,2.833,-18.869)
C4': (-38.746,2.444,-16.266)
C2': (-40.610,1.014,-16.358)
O2': (-41.071,1.171,-15.032)
N1: (-41.076,1.961,-18.589)
O4: (-41.540,0.899,-22.437)
O2: (-43.246,1.299,-18.256)
C6: (-40.041,2.145,-19.477)
C5: (-40.135,1.830,-20.772)
O3': (-38.531,0.168,-15.424)
Image (generated by PyMOL):