ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OEU:B16:B17

Extra

PDB:
ATOM 1 O3' A A 15 3.158 16.628 4.951 1.00 38.34 O
ATOM 2 P A A 16 3.019 17.029 6.502 1.00 42.83 P
ATOM 3 OP1 A A 16 4.214 16.433 7.165 1.00 43.29 O
ATOM 4 OP2 A A 16 1.665 16.621 6.908 1.00 41.81 O
ATOM 5 O5' A A 16 3.107 18.615 6.590 1.00 41.20 O
ATOM 6 C5' A A 16 4.330 19.281 6.313 1.00 39.83 C
ATOM 7 C4' A A 16 4.056 20.735 5.968 1.00 37.83 C
ATOM 8 O4' A A 16 3.211 20.836 4.798 1.00 40.13 O
ATOM 9 C3' A A 16 3.317 21.545 7.019 1.00 39.97 C
ATOM 10 O3' A A 16 4.254 22.045 7.938 1.00 39.15 O
ATOM 11 C2' A A 16 2.785 22.688 6.164 1.00 41.12 C
ATOM 12 O2' A A 16 3.831 23.562 5.794 1.00 42.44 O
ATOM 13 C1' A A 16 2.296 21.925 4.952 1.00 39.85 C
ATOM 14 N9 A A 16 0.901 21.488 5.158 1.00 40.09 N
ATOM 15 C8 A A 16 0.440 20.217 5.382 1.00 38.62 C
ATOM 16 N7 A A 16 -0.869 20.186 5.562 1.00 39.22 N
ATOM 17 C5 A A 16 -1.286 21.513 5.425 1.00 37.65 C
ATOM 18 C6 A A 16 -2.558 22.149 5.504 1.00 38.31 C
ATOM 19 N6 A A 16 -3.700 21.480 5.720 1.00 39.47 N
ATOM 20 N1 A A 16 -2.627 23.492 5.345 1.00 38.40 N
ATOM 21 C2 A A 16 -1.490 24.174 5.107 1.00 38.23 C
ATOM 22 N3 A A 16 -0.248 23.687 5.020 1.00 39.25 N
ATOM 23 C4 A A 16 -0.209 22.331 5.191 1.00 39.48 C
ATOM 24 P U A 17 3.909 22.242 9.480 1.00 40.49 P
ATOM 25 OP1 U A 17 5.156 22.715 10.130 1.00 38.21 O
ATOM 26 OP2 U A 17 3.236 21.000 9.932 1.00 38.92 O
ATOM 27 O5' U A 17 2.845 23.436 9.454 1.00 40.81 O
TER

ATOM 1 O3' A B 16 4.254 22.045 7.938 1.00 39.15 O
ATOM 2 P U B 17 3.909 22.242 9.480 1.00 40.49 P
ATOM 3 OP1 U B 17 5.156 22.715 10.130 1.00 38.21 O
ATOM 4 OP2 U B 17 3.236 21.000 9.932 1.00 38.92 O
ATOM 5 O5' U B 17 2.845 23.436 9.454 1.00 40.81 O
ATOM 6 C5' U B 17 3.210 24.758 9.064 1.00 41.06 C
ATOM 7 C4' U B 17 1.978 25.628 9.136 1.00 41.09 C
ATOM 8 O4' U B 17 0.991 25.169 8.187 1.00 40.16 O
ATOM 9 C3' U B 17 1.220 25.570 10.457 1.00 41.26 C
ATOM 10 O3' U B 17 1.889 26.388 11.409 1.00 41.02 O
ATOM 11 C2' U B 17 -0.134 26.126 10.025 1.00 40.69 C
ATOM 12 O2' U B 17 -0.113 27.534 9.790 1.00 40.80 O
ATOM 13 C1' U B 17 -0.315 25.374 8.713 1.00 39.86 C
ATOM 14 N1 U B 17 -1.009 24.040 8.797 1.00 39.35 N
ATOM 15 C2 U B 17 -2.380 23.998 8.974 1.00 41.26 C
ATOM 16 O2 U B 17 -3.081 24.988 9.098 1.00 41.65 O
ATOM 17 N3 U B 17 -2.928 22.740 9.010 1.00 38.70 N
ATOM 18 C4 U B 17 -2.279 21.545 8.899 1.00 39.12 C
ATOM 19 O4 U B 17 -2.938 20.510 8.967 1.00 40.07 O
ATOM 20 C5 U B 17 -0.859 21.650 8.721 1.00 39.55 C
ATOM 21 C6 U B 17 -0.290 22.874 8.674 1.00 37.18 C
ATOM 22 P C B 18 1.972 25.968 12.959 1.00 41.47 P
ATOM 23 OP1 C B 18 2.836 26.963 13.613 1.00 38.51 O
ATOM 24 OP2 C B 18 2.279 24.537 13.134 1.00 38.00 O
ATOM 25 O5' C B 18 0.443 26.221 13.374 1.00 42.26 O
TER

Atoms:
OP1: (4.214,16.433,7.165)
OP2: (1.665,16.621,6.908)
C3': (3.317,21.545,7.019)
C1': (2.296,21.925,4.952)
C5': (4.330,19.281,6.313)
O4': (3.211,20.836,4.798)
C8: (0.440,20.217,5.382)
O2': (3.831,23.562,5.794)
C6: (-2.558,22.149,5.504)
C5: (-1.286,21.513,5.425)
C4: (-0.209,22.331,5.191)
P: (3.019,17.029,6.502)
C4': (4.056,20.735,5.968)
C2': (2.785,22.688,6.164)
C2: (-1.490,24.174,5.107)
N1: (-2.627,23.492,5.345)
N3: (-0.248,23.687,5.020)
N6: (-3.700,21.480,5.720)
N7: (-0.869,20.186,5.562)
N9: (0.901,21.488,5.158)
O5': (3.107,18.615,6.590)
O3': (4.254,22.045,7.938)
C4: (-2.279,21.545,8.899)
N3: (-2.928,22.740,9.010)
OP1: (5.156,22.715,10.130)
OP2: (3.236,21.000,9.932)
C2: (-2.380,23.998,8.974)
C1': (-0.315,25.374,8.713)
C3': (1.220,25.570,10.457)
O5': (2.845,23.436,9.454)
O4': (0.991,25.169,8.187)
C5': (3.210,24.758,9.064)
P: (3.909,22.242,9.480)
C4': (1.978,25.628,9.136)
C2': (-0.134,26.126,10.025)
O2': (-0.113,27.534,9.790)
N1: (-1.009,24.040,8.797)
O4: (-2.938,20.510,8.967)
O2: (-3.081,24.988,9.098)
C6: (-0.290,22.874,8.674)
C5: (-0.859,21.650,8.721)
O3': (1.889,26.388,11.409)
Image (generated by PyMOL):
PyMOL image
show in jmol