Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1RNA:B4:B5
Extra
PDB:
ATOM 1 O3' U A 3 21.155 15.591 5.451 1.00 10.95 O
ATOM 2 P A A 4 20.152 15.787 6.679 1.00 12.87 P
ATOM 3 OP1 A A 4 20.780 14.877 7.759 1.00 18.17 O
ATOM 4 OP2 A A 4 18.812 15.413 6.266 1.00 9.62 O
ATOM 5 O5' A A 4 20.340 17.273 7.200 1.00 12.96 O
ATOM 6 C5' A A 4 21.677 17.732 7.524 1.00 17.03 C
ATOM 7 C4' A A 4 21.537 19.236 7.671 1.00 14.93 C
ATOM 8 O4' A A 4 21.329 19.767 6.384 1.00 14.88 O
ATOM 9 C3' A A 4 20.326 19.651 8.491 1.00 12.91 C
ATOM 10 O3' A A 4 20.562 19.602 9.901 1.00 16.73 O
ATOM 11 C2' A A 4 20.019 21.043 7.926 1.00 11.60 C
ATOM 12 O2' A A 4 20.855 22.055 8.462 1.00 12.17 O
ATOM 13 C1' A A 4 20.398 20.864 6.463 1.00 11.23 C
ATOM 14 N9 A A 4 19.132 20.659 5.716 1.00 6.83 N
ATOM 15 C8 A A 4 18.546 19.490 5.299 1.00 5.81 C
ATOM 16 N7 A A 4 17.403 19.664 4.690 1.00 6.46 N
ATOM 17 C5 A A 4 17.246 21.047 4.695 1.00 2.00 C
ATOM 18 C6 A A 4 16.206 21.868 4.204 1.00 3.46 C
ATOM 19 N6 A A 4 15.114 21.457 3.560 1.00 5.51 N
ATOM 20 N1 A A 4 16.407 23.202 4.435 1.00 3.28 N
ATOM 21 C2 A A 4 17.498 23.715 5.058 1.00 3.85 C
ATOM 22 N3 A A 4 18.471 22.983 5.579 1.00 3.49 N
ATOM 23 C4 A A 4 18.283 21.667 5.338 1.00 3.88 C
ATOM 24 P U A 5 19.559 19.321 11.109 1.00 13.22 P
ATOM 25 OP1 U A 5 20.217 18.656 12.263 1.00 16.03 O
ATOM 26 OP2 U A 5 18.600 18.361 10.367 1.00 19.11 O
ATOM 27 O5' U A 5 18.791 20.605 11.364 1.00 15.78 O
TER
ATOM 1 O3' A B 4 20.562 19.602 9.901 1.00 16.73 O
ATOM 2 P U B 5 19.559 19.321 11.109 1.00 13.22 P
ATOM 3 OP1 U B 5 20.217 18.656 12.263 1.00 16.03 O
ATOM 4 OP2 U B 5 18.600 18.361 10.367 1.00 19.11 O
ATOM 5 O5' U B 5 18.791 20.605 11.364 1.00 15.78 O
ATOM 6 C5' U B 5 18.952 21.819 12.135 1.00 16.21 C
ATOM 7 C4' U B 5 18.177 23.001 11.605 1.00 12.98 C
ATOM 8 O4' U B 5 18.269 23.126 10.200 1.00 16.41 O
ATOM 9 C3' U B 5 16.683 22.996 11.855 1.00 15.20 C
ATOM 10 O3' U B 5 16.305 23.367 13.181 1.00 19.02 O
ATOM 11 C2' U B 5 16.192 24.045 10.868 1.00 13.91 C
ATOM 12 O2' U B 5 16.543 25.240 11.551 1.00 16.35 O
ATOM 13 C1' U B 5 17.086 23.750 9.680 1.00 12.43 C
ATOM 14 N1 U B 5 16.342 22.778 8.855 1.00 5.13 N
ATOM 15 C2 U B 5 15.292 23.277 8.098 1.00 12.04 C
ATOM 16 O2 U B 5 15.012 24.469 8.020 1.00 11.63 O
ATOM 17 N3 U B 5 14.585 22.350 7.386 1.00 9.80 N
ATOM 18 C4 U B 5 14.841 21.011 7.396 1.00 6.46 C
ATOM 19 O4 U B 5 14.084 20.347 6.635 1.00 8.50 O
ATOM 20 C5 U B 5 15.933 20.538 8.177 1.00 10.65 C
ATOM 21 C6 U B 5 16.622 21.448 8.879 1.00 7.39 C
ATOM 22 P A B 6 15.568 22.238 14.099 1.00 19.13 P
ATOM 23 OP1 A B 6 16.543 22.243 15.254 1.00 14.55 O
ATOM 24 OP2 A B 6 15.530 20.949 13.402 1.00 13.20 O
ATOM 25 O5' A B 6 14.169 22.938 14.173 1.00 11.20 O
TER
ATOM 2 P A A 4 20.152 15.787 6.679 1.00 12.87 P
ATOM 3 OP1 A A 4 20.780 14.877 7.759 1.00 18.17 O
ATOM 4 OP2 A A 4 18.812 15.413 6.266 1.00 9.62 O
ATOM 5 O5' A A 4 20.340 17.273 7.200 1.00 12.96 O
ATOM 6 C5' A A 4 21.677 17.732 7.524 1.00 17.03 C
ATOM 7 C4' A A 4 21.537 19.236 7.671 1.00 14.93 C
ATOM 8 O4' A A 4 21.329 19.767 6.384 1.00 14.88 O
ATOM 9 C3' A A 4 20.326 19.651 8.491 1.00 12.91 C
ATOM 10 O3' A A 4 20.562 19.602 9.901 1.00 16.73 O
ATOM 11 C2' A A 4 20.019 21.043 7.926 1.00 11.60 C
ATOM 12 O2' A A 4 20.855 22.055 8.462 1.00 12.17 O
ATOM 13 C1' A A 4 20.398 20.864 6.463 1.00 11.23 C
ATOM 14 N9 A A 4 19.132 20.659 5.716 1.00 6.83 N
ATOM 15 C8 A A 4 18.546 19.490 5.299 1.00 5.81 C
ATOM 16 N7 A A 4 17.403 19.664 4.690 1.00 6.46 N
ATOM 17 C5 A A 4 17.246 21.047 4.695 1.00 2.00 C
ATOM 18 C6 A A 4 16.206 21.868 4.204 1.00 3.46 C
ATOM 19 N6 A A 4 15.114 21.457 3.560 1.00 5.51 N
ATOM 20 N1 A A 4 16.407 23.202 4.435 1.00 3.28 N
ATOM 21 C2 A A 4 17.498 23.715 5.058 1.00 3.85 C
ATOM 22 N3 A A 4 18.471 22.983 5.579 1.00 3.49 N
ATOM 23 C4 A A 4 18.283 21.667 5.338 1.00 3.88 C
ATOM 24 P U A 5 19.559 19.321 11.109 1.00 13.22 P
ATOM 25 OP1 U A 5 20.217 18.656 12.263 1.00 16.03 O
ATOM 26 OP2 U A 5 18.600 18.361 10.367 1.00 19.11 O
ATOM 27 O5' U A 5 18.791 20.605 11.364 1.00 15.78 O
TER
ATOM 1 O3' A B 4 20.562 19.602 9.901 1.00 16.73 O
ATOM 2 P U B 5 19.559 19.321 11.109 1.00 13.22 P
ATOM 3 OP1 U B 5 20.217 18.656 12.263 1.00 16.03 O
ATOM 4 OP2 U B 5 18.600 18.361 10.367 1.00 19.11 O
ATOM 5 O5' U B 5 18.791 20.605 11.364 1.00 15.78 O
ATOM 6 C5' U B 5 18.952 21.819 12.135 1.00 16.21 C
ATOM 7 C4' U B 5 18.177 23.001 11.605 1.00 12.98 C
ATOM 8 O4' U B 5 18.269 23.126 10.200 1.00 16.41 O
ATOM 9 C3' U B 5 16.683 22.996 11.855 1.00 15.20 C
ATOM 10 O3' U B 5 16.305 23.367 13.181 1.00 19.02 O
ATOM 11 C2' U B 5 16.192 24.045 10.868 1.00 13.91 C
ATOM 12 O2' U B 5 16.543 25.240 11.551 1.00 16.35 O
ATOM 13 C1' U B 5 17.086 23.750 9.680 1.00 12.43 C
ATOM 14 N1 U B 5 16.342 22.778 8.855 1.00 5.13 N
ATOM 15 C2 U B 5 15.292 23.277 8.098 1.00 12.04 C
ATOM 16 O2 U B 5 15.012 24.469 8.020 1.00 11.63 O
ATOM 17 N3 U B 5 14.585 22.350 7.386 1.00 9.80 N
ATOM 18 C4 U B 5 14.841 21.011 7.396 1.00 6.46 C
ATOM 19 O4 U B 5 14.084 20.347 6.635 1.00 8.50 O
ATOM 20 C5 U B 5 15.933 20.538 8.177 1.00 10.65 C
ATOM 21 C6 U B 5 16.622 21.448 8.879 1.00 7.39 C
ATOM 22 P A B 6 15.568 22.238 14.099 1.00 19.13 P
ATOM 23 OP1 A B 6 16.543 22.243 15.254 1.00 14.55 O
ATOM 24 OP2 A B 6 15.530 20.949 13.402 1.00 13.20 O
ATOM 25 O5' A B 6 14.169 22.938 14.173 1.00 11.20 O
TER
Atoms:
OP1: (20.780,14.877,7.759)
OP2: (18.812,15.413,6.266)
C3': (20.326,19.651,8.491)
C1': (20.398,20.864,6.463)
C5': (21.677,17.732,7.524)
O4': (21.329,19.767,6.384)
C8: (18.546,19.490,5.299)
O2': (20.855,22.055,8.462)
C6: (16.206,21.868,4.204)
C5: (17.246,21.047,4.695)
C4: (18.283,21.667,5.338)
P: (20.152,15.787,6.679)
C4': (21.537,19.236,7.671)
C2': (20.019,21.043,7.926)
C2: (17.498,23.715,5.058)
N1: (16.407,23.202,4.435)
N3: (18.471,22.983,5.579)
N6: (15.114,21.457,3.560)
N7: (17.403,19.664,4.690)
N9: (19.132,20.659,5.716)
O5': (20.340,17.273,7.200)
O3': (20.562,19.602,9.901)
OP2: (18.812,15.413,6.266)
C3': (20.326,19.651,8.491)
C1': (20.398,20.864,6.463)
C5': (21.677,17.732,7.524)
O4': (21.329,19.767,6.384)
C8: (18.546,19.490,5.299)
O2': (20.855,22.055,8.462)
C6: (16.206,21.868,4.204)
C5: (17.246,21.047,4.695)
C4: (18.283,21.667,5.338)
P: (20.152,15.787,6.679)
C4': (21.537,19.236,7.671)
C2': (20.019,21.043,7.926)
C2: (17.498,23.715,5.058)
N1: (16.407,23.202,4.435)
N3: (18.471,22.983,5.579)
N6: (15.114,21.457,3.560)
N7: (17.403,19.664,4.690)
N9: (19.132,20.659,5.716)
O5': (20.340,17.273,7.200)
O3': (20.562,19.602,9.901)
C4: (14.841,21.011,7.396)
N3: (14.585,22.350,7.386)
OP1: (20.217,18.656,12.263)
OP2: (18.600,18.361,10.367)
C2: (15.292,23.277,8.098)
C1': (17.086,23.750,9.680)
C3': (16.683,22.996,11.855)
O5': (18.791,20.605,11.364)
O4': (18.269,23.126,10.200)
C5': (18.952,21.819,12.135)
P: (19.559,19.321,11.109)
C4': (18.177,23.001,11.605)
C2': (16.192,24.045,10.868)
O2': (16.543,25.240,11.551)
N1: (16.342,22.778,8.855)
O4: (14.084,20.347,6.635)
O2: (15.012,24.469,8.020)
C6: (16.622,21.448,8.879)
C5: (15.933,20.538,8.177)
O3': (16.305,23.367,13.181)
N3: (14.585,22.350,7.386)
OP1: (20.217,18.656,12.263)
OP2: (18.600,18.361,10.367)
C2: (15.292,23.277,8.098)
C1': (17.086,23.750,9.680)
C3': (16.683,22.996,11.855)
O5': (18.791,20.605,11.364)
O4': (18.269,23.126,10.200)
C5': (18.952,21.819,12.135)
P: (19.559,19.321,11.109)
C4': (18.177,23.001,11.605)
C2': (16.192,24.045,10.868)
O2': (16.543,25.240,11.551)
N1: (16.342,22.778,8.855)
O4: (14.084,20.347,6.635)
O2: (15.012,24.469,8.020)
C6: (16.622,21.448,8.879)
C5: (15.933,20.538,8.177)
O3': (16.305,23.367,13.181)
Image (generated by PyMOL):