ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A618:A619

Extra

PDB:
ATOM 1 O3' G A 617 109.118 109.597 -24.016 1.00 67.83 O
ATOM 2 P A A 618 109.880 110.077 -25.349 1.00 53.90 P
ATOM 3 OP1 A A 618 109.168 111.260 -25.898 1.00 54.43 O
ATOM 4 OP2 A A 618 110.102 108.889 -26.210 1.00 54.43 O
ATOM 5 O5' A A 618 111.279 110.598 -24.808 1.00 53.90 O
ATOM 6 C5' A A 618 111.355 111.790 -24.006 1.00 53.90 C
ATOM 7 C4' A A 618 112.788 112.244 -23.882 1.00 53.90 C
ATOM 8 O4' A A 618 113.543 111.286 -23.102 1.00 53.90 O
ATOM 9 C3' A A 618 113.558 112.388 -25.186 1.00 53.90 C
ATOM 10 O3' A A 618 113.330 113.678 -25.744 1.00 53.90 O
ATOM 11 C2' A A 618 114.999 112.238 -24.721 1.00 53.90 C
ATOM 12 O2' A A 618 115.493 113.440 -24.164 1.00 53.90 O
ATOM 13 C1' A A 618 114.863 111.210 -23.596 1.00 53.90 C
ATOM 14 N9 A A 618 115.119 109.836 -24.043 1.00 54.43 N
ATOM 15 C8 A A 618 114.232 108.903 -24.529 1.00 54.43 C
ATOM 16 N7 A A 618 114.792 107.765 -24.866 1.00 54.43 N
ATOM 17 C5 A A 618 116.133 107.958 -24.581 1.00 54.43 C
ATOM 18 C6 A A 618 117.254 107.131 -24.723 1.00 54.43 C
ATOM 19 N6 A A 618 117.200 105.885 -25.202 1.00 54.43 N
ATOM 20 N1 A A 618 118.452 107.629 -24.352 1.00 54.43 N
ATOM 21 C2 A A 618 118.507 108.875 -23.869 1.00 54.43 C
ATOM 22 N3 A A 618 117.528 109.749 -23.686 1.00 54.43 N
ATOM 23 C4 A A 618 116.350 109.225 -24.068 1.00 54.43 C
ATOM 24 P U A 619 113.296 113.873 -27.338 1.00 52.86 P
ATOM 25 OP1 U A 619 112.896 115.285 -27.583 1.00 65.73 O
ATOM 26 OP2 U A 619 112.527 112.761 -27.957 1.00 65.73 O
ATOM 27 O5' U A 619 114.813 113.745 -27.789 1.00 52.86 O
TER

ATOM 1 O3' A B 618 113.330 113.678 -25.744 1.00 53.90 O
ATOM 2 P U B 619 113.296 113.873 -27.338 1.00 52.86 P
ATOM 3 OP1 U B 619 112.896 115.285 -27.583 1.00 65.73 O
ATOM 4 OP2 U B 619 112.527 112.761 -27.957 1.00 65.73 O
ATOM 5 O5' U B 619 114.813 113.745 -27.789 1.00 52.86 O
ATOM 6 C5' U B 619 115.817 114.566 -27.187 1.00 52.86 C
ATOM 7 C4' U B 619 117.173 114.134 -27.646 1.00 52.86 C
ATOM 8 O4' U B 619 117.449 112.802 -27.128 1.00 52.86 O
ATOM 9 C3' U B 619 117.351 114.077 -29.159 1.00 52.86 C
ATOM 10 O3' U B 619 118.604 114.607 -29.534 1.00 52.86 O
ATOM 11 C2' U B 619 117.323 112.586 -29.467 1.00 52.86 C
ATOM 12 O2' U B 619 118.138 112.240 -30.564 1.00 52.86 O
ATOM 13 C1' U B 619 117.878 111.970 -28.183 1.00 52.86 C
ATOM 14 N1 U B 619 117.363 110.608 -27.975 1.00 65.73 N
ATOM 15 C2 U B 619 118.274 109.574 -27.912 1.00 65.73 C
ATOM 16 O2 U B 619 119.477 109.749 -27.865 1.00 65.73 O
ATOM 17 N3 U B 619 117.720 108.320 -27.888 1.00 65.73 N
ATOM 18 C4 U B 619 116.379 108.008 -27.885 1.00 65.73 C
ATOM 19 O4 U B 619 116.032 106.850 -28.099 1.00 65.73 O
ATOM 20 C5 U B 619 115.515 109.131 -27.852 1.00 65.73 C
ATOM 21 C6 U B 619 116.020 110.359 -27.898 1.00 65.73 C
ATOM 22 P A B 620 118.685 116.080 -30.177 1.00 55.45 P
ATOM 23 OP1 A B 620 118.036 117.019 -29.217 1.00 42.80 O
ATOM 24 OP2 A B 620 118.203 116.017 -31.580 1.00 42.80 O
ATOM 25 O5' A B 620 120.247 116.385 -30.174 1.00 55.45 O
TER

Atoms:
OP1: (109.168,111.260,-25.898)
OP2: (110.102,108.889,-26.210)
C3': (113.558,112.388,-25.186)
C1': (114.863,111.210,-23.596)
C5': (111.355,111.790,-24.006)
O4': (113.543,111.286,-23.102)
C8: (114.232,108.903,-24.529)
O2': (115.493,113.440,-24.164)
C6: (117.254,107.131,-24.723)
C5: (116.133,107.958,-24.581)
C4: (116.350,109.225,-24.068)
P: (109.880,110.077,-25.349)
C4': (112.788,112.244,-23.882)
C2': (114.999,112.238,-24.721)
C2: (118.507,108.875,-23.869)
N1: (118.452,107.629,-24.352)
N3: (117.528,109.749,-23.686)
N6: (117.200,105.885,-25.202)
N7: (114.792,107.765,-24.866)
N9: (115.119,109.836,-24.043)
O5': (111.279,110.598,-24.808)
O3': (113.330,113.678,-25.744)
C4: (116.379,108.008,-27.885)
N3: (117.720,108.320,-27.888)
OP1: (112.896,115.285,-27.583)
OP2: (112.527,112.761,-27.957)
C2: (118.274,109.574,-27.912)
C1': (117.878,111.970,-28.183)
C3': (117.351,114.077,-29.159)
O5': (114.813,113.745,-27.789)
O4': (117.449,112.802,-27.128)
C5': (115.817,114.566,-27.187)
P: (113.296,113.873,-27.338)
C4': (117.173,114.134,-27.646)
C2': (117.323,112.586,-29.467)
O2': (118.138,112.240,-30.564)
N1: (117.363,110.608,-27.975)
O4: (116.032,106.850,-28.099)
O2: (119.477,109.749,-27.865)
C6: (116.020,110.359,-27.898)
C5: (115.515,109.131,-27.852)
O3': (118.604,114.607,-29.534)
Image (generated by PyMOL):
PyMOL image
show in jmol