Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:A60:A61
Extra
PDB:
ATOM 1 O3' U A 59 -9.934 -1.703 -63.165 1.00 19.88 O
ATOM 2 P A A 60 -9.609 -1.277 -64.680 1.00 17.38 P
ATOM 3 OP1 A A 60 -10.702 -1.822 -65.515 1.00 17.76 O
ATOM 4 OP2 A A 60 -8.208 -1.618 -64.992 1.00 17.01 O
ATOM 5 O5' A A 60 -9.707 0.326 -64.640 1.00 17.38 O
ATOM 6 C5' A A 60 -10.885 0.955 -64.147 1.00 18.56 C
ATOM 7 C4' A A 60 -10.637 2.400 -63.746 1.00 18.29 C
ATOM 8 O4' A A 60 -9.689 2.493 -62.652 1.00 18.36 O
ATOM 9 C3' A A 60 -10.023 3.275 -64.821 1.00 17.58 C
ATOM 10 O3' A A 60 -11.026 3.681 -65.730 1.00 18.48 O
ATOM 11 C2' A A 60 -9.495 4.430 -63.982 1.00 17.07 C
ATOM 12 O2' A A 60 -10.522 5.302 -63.550 1.00 17.66 O
ATOM 13 C1' A A 60 -8.920 3.678 -62.793 1.00 17.26 C
ATOM 14 N9 A A 60 -7.522 3.285 -62.946 1.00 16.39 N
ATOM 15 C8 A A 60 -7.075 2.025 -63.239 1.00 18.29 C
ATOM 16 N7 A A 60 -5.776 1.920 -63.308 1.00 17.83 N
ATOM 17 C5 A A 60 -5.335 3.198 -63.037 1.00 16.45 C
ATOM 18 C6 A A 60 -4.040 3.731 -62.957 1.00 16.08 C
ATOM 19 N6 A A 60 -2.954 2.980 -63.167 1.00 16.59 N
ATOM 20 N1 A A 60 -3.912 5.053 -62.669 1.00 14.78 N
ATOM 21 C2 A A 60 -5.028 5.785 -62.471 1.00 15.00 C
ATOM 22 N3 A A 60 -6.305 5.385 -62.512 1.00 15.35 N
ATOM 23 C4 A A 60 -6.390 4.063 -62.807 1.00 16.46 C
ATOM 24 P U A 61 -10.753 3.634 -67.299 1.00 18.75 P
ATOM 25 OP1 U A 61 -12.066 3.795 -67.966 1.00 20.51 O
ATOM 26 OP2 U A 61 -9.879 2.482 -67.620 1.00 17.67 O
ATOM 27 O5' U A 61 -9.894 4.953 -67.538 1.00 19.24 O
TER
ATOM 1 O3' A B 60 -11.026 3.681 -65.730 1.00 18.48 O
ATOM 2 P U B 61 -10.753 3.634 -67.299 1.00 18.75 P
ATOM 3 OP1 U B 61 -12.066 3.795 -67.966 1.00 20.51 O
ATOM 4 OP2 U B 61 -9.879 2.482 -67.620 1.00 17.67 O
ATOM 5 O5' U B 61 -9.894 4.953 -67.538 1.00 19.24 O
ATOM 6 C5' U B 61 -10.452 6.225 -67.217 1.00 19.96 C
ATOM 7 C4' U B 61 -9.344 7.242 -67.075 1.00 19.09 C
ATOM 8 O4' U B 61 -8.468 6.852 -65.989 1.00 17.83 O
ATOM 9 C3' U B 61 -8.383 7.301 -68.244 1.00 19.08 C
ATOM 10 O3' U B 61 -8.962 7.969 -69.353 1.00 20.68 O
ATOM 11 C2' U B 61 -7.224 8.056 -67.600 1.00 17.72 C
ATOM 12 O2' U B 61 -7.493 9.429 -67.403 1.00 17.80 O
ATOM 13 C1' U B 61 -7.158 7.338 -66.255 1.00 17.11 C
ATOM 14 N1 U B 61 -6.182 6.202 -66.250 1.00 16.27 N
ATOM 15 C2 U B 61 -4.841 6.454 -65.993 1.00 15.80 C
ATOM 16 O2 U B 61 -4.394 7.568 -65.756 1.00 15.62 O
ATOM 17 N3 U B 61 -4.035 5.335 -66.022 1.00 15.70 N
ATOM 18 C4 U B 61 -4.421 4.032 -66.288 1.00 16.00 C
ATOM 19 O4 U B 61 -3.589 3.129 -66.277 1.00 16.62 O
ATOM 20 C5 U B 61 -5.824 3.852 -66.546 1.00 16.15 C
ATOM 21 C6 U B 61 -6.632 4.916 -66.518 1.00 16.61 C
ATOM 22 P A B 62 -8.527 7.562 -70.839 1.00 23.20 P
ATOM 23 OP1 A B 62 -9.463 8.228 -71.773 1.00 25.27 O
ATOM 24 OP2 A B 62 -8.339 6.095 -70.900 1.00 22.67 O
ATOM 25 O5' A B 62 -7.089 8.229 -70.977 1.00 22.74 O
TER
ATOM 2 P A A 60 -9.609 -1.277 -64.680 1.00 17.38 P
ATOM 3 OP1 A A 60 -10.702 -1.822 -65.515 1.00 17.76 O
ATOM 4 OP2 A A 60 -8.208 -1.618 -64.992 1.00 17.01 O
ATOM 5 O5' A A 60 -9.707 0.326 -64.640 1.00 17.38 O
ATOM 6 C5' A A 60 -10.885 0.955 -64.147 1.00 18.56 C
ATOM 7 C4' A A 60 -10.637 2.400 -63.746 1.00 18.29 C
ATOM 8 O4' A A 60 -9.689 2.493 -62.652 1.00 18.36 O
ATOM 9 C3' A A 60 -10.023 3.275 -64.821 1.00 17.58 C
ATOM 10 O3' A A 60 -11.026 3.681 -65.730 1.00 18.48 O
ATOM 11 C2' A A 60 -9.495 4.430 -63.982 1.00 17.07 C
ATOM 12 O2' A A 60 -10.522 5.302 -63.550 1.00 17.66 O
ATOM 13 C1' A A 60 -8.920 3.678 -62.793 1.00 17.26 C
ATOM 14 N9 A A 60 -7.522 3.285 -62.946 1.00 16.39 N
ATOM 15 C8 A A 60 -7.075 2.025 -63.239 1.00 18.29 C
ATOM 16 N7 A A 60 -5.776 1.920 -63.308 1.00 17.83 N
ATOM 17 C5 A A 60 -5.335 3.198 -63.037 1.00 16.45 C
ATOM 18 C6 A A 60 -4.040 3.731 -62.957 1.00 16.08 C
ATOM 19 N6 A A 60 -2.954 2.980 -63.167 1.00 16.59 N
ATOM 20 N1 A A 60 -3.912 5.053 -62.669 1.00 14.78 N
ATOM 21 C2 A A 60 -5.028 5.785 -62.471 1.00 15.00 C
ATOM 22 N3 A A 60 -6.305 5.385 -62.512 1.00 15.35 N
ATOM 23 C4 A A 60 -6.390 4.063 -62.807 1.00 16.46 C
ATOM 24 P U A 61 -10.753 3.634 -67.299 1.00 18.75 P
ATOM 25 OP1 U A 61 -12.066 3.795 -67.966 1.00 20.51 O
ATOM 26 OP2 U A 61 -9.879 2.482 -67.620 1.00 17.67 O
ATOM 27 O5' U A 61 -9.894 4.953 -67.538 1.00 19.24 O
TER
ATOM 1 O3' A B 60 -11.026 3.681 -65.730 1.00 18.48 O
ATOM 2 P U B 61 -10.753 3.634 -67.299 1.00 18.75 P
ATOM 3 OP1 U B 61 -12.066 3.795 -67.966 1.00 20.51 O
ATOM 4 OP2 U B 61 -9.879 2.482 -67.620 1.00 17.67 O
ATOM 5 O5' U B 61 -9.894 4.953 -67.538 1.00 19.24 O
ATOM 6 C5' U B 61 -10.452 6.225 -67.217 1.00 19.96 C
ATOM 7 C4' U B 61 -9.344 7.242 -67.075 1.00 19.09 C
ATOM 8 O4' U B 61 -8.468 6.852 -65.989 1.00 17.83 O
ATOM 9 C3' U B 61 -8.383 7.301 -68.244 1.00 19.08 C
ATOM 10 O3' U B 61 -8.962 7.969 -69.353 1.00 20.68 O
ATOM 11 C2' U B 61 -7.224 8.056 -67.600 1.00 17.72 C
ATOM 12 O2' U B 61 -7.493 9.429 -67.403 1.00 17.80 O
ATOM 13 C1' U B 61 -7.158 7.338 -66.255 1.00 17.11 C
ATOM 14 N1 U B 61 -6.182 6.202 -66.250 1.00 16.27 N
ATOM 15 C2 U B 61 -4.841 6.454 -65.993 1.00 15.80 C
ATOM 16 O2 U B 61 -4.394 7.568 -65.756 1.00 15.62 O
ATOM 17 N3 U B 61 -4.035 5.335 -66.022 1.00 15.70 N
ATOM 18 C4 U B 61 -4.421 4.032 -66.288 1.00 16.00 C
ATOM 19 O4 U B 61 -3.589 3.129 -66.277 1.00 16.62 O
ATOM 20 C5 U B 61 -5.824 3.852 -66.546 1.00 16.15 C
ATOM 21 C6 U B 61 -6.632 4.916 -66.518 1.00 16.61 C
ATOM 22 P A B 62 -8.527 7.562 -70.839 1.00 23.20 P
ATOM 23 OP1 A B 62 -9.463 8.228 -71.773 1.00 25.27 O
ATOM 24 OP2 A B 62 -8.339 6.095 -70.900 1.00 22.67 O
ATOM 25 O5' A B 62 -7.089 8.229 -70.977 1.00 22.74 O
TER
Atoms:
OP1: (-10.702,-1.822,-65.515)
OP2: (-8.208,-1.618,-64.992)
C3': (-10.023,3.275,-64.821)
C1': (-8.920,3.678,-62.793)
C5': (-10.885,0.955,-64.147)
O4': (-9.689,2.493,-62.652)
C8: (-7.075,2.025,-63.239)
O2': (-10.522,5.302,-63.550)
C6: (-4.040,3.731,-62.957)
C5: (-5.335,3.198,-63.037)
C4: (-6.390,4.063,-62.807)
P: (-9.609,-1.277,-64.680)
C4': (-10.637,2.400,-63.746)
C2': (-9.495,4.430,-63.982)
C2: (-5.028,5.785,-62.471)
N1: (-3.912,5.053,-62.669)
N3: (-6.305,5.385,-62.512)
N6: (-2.954,2.980,-63.167)
N7: (-5.776,1.920,-63.308)
N9: (-7.522,3.285,-62.946)
O5': (-9.707,0.326,-64.640)
O3': (-11.026,3.681,-65.730)
OP2: (-8.208,-1.618,-64.992)
C3': (-10.023,3.275,-64.821)
C1': (-8.920,3.678,-62.793)
C5': (-10.885,0.955,-64.147)
O4': (-9.689,2.493,-62.652)
C8: (-7.075,2.025,-63.239)
O2': (-10.522,5.302,-63.550)
C6: (-4.040,3.731,-62.957)
C5: (-5.335,3.198,-63.037)
C4: (-6.390,4.063,-62.807)
P: (-9.609,-1.277,-64.680)
C4': (-10.637,2.400,-63.746)
C2': (-9.495,4.430,-63.982)
C2: (-5.028,5.785,-62.471)
N1: (-3.912,5.053,-62.669)
N3: (-6.305,5.385,-62.512)
N6: (-2.954,2.980,-63.167)
N7: (-5.776,1.920,-63.308)
N9: (-7.522,3.285,-62.946)
O5': (-9.707,0.326,-64.640)
O3': (-11.026,3.681,-65.730)
C4: (-4.421,4.032,-66.288)
N3: (-4.035,5.335,-66.022)
OP1: (-12.066,3.795,-67.966)
OP2: (-9.879,2.482,-67.620)
C2: (-4.841,6.454,-65.993)
C1': (-7.158,7.338,-66.255)
C3': (-8.383,7.301,-68.244)
O5': (-9.894,4.953,-67.538)
O4': (-8.468,6.852,-65.989)
C5': (-10.452,6.225,-67.217)
P: (-10.753,3.634,-67.299)
C4': (-9.344,7.242,-67.075)
C2': (-7.224,8.056,-67.600)
O2': (-7.493,9.429,-67.403)
N1: (-6.182,6.202,-66.250)
O4: (-3.589,3.129,-66.277)
O2: (-4.394,7.568,-65.756)
C6: (-6.632,4.916,-66.518)
C5: (-5.824,3.852,-66.546)
O3': (-8.962,7.969,-69.353)
N3: (-4.035,5.335,-66.022)
OP1: (-12.066,3.795,-67.966)
OP2: (-9.879,2.482,-67.620)
C2: (-4.841,6.454,-65.993)
C1': (-7.158,7.338,-66.255)
C3': (-8.383,7.301,-68.244)
O5': (-9.894,4.953,-67.538)
O4': (-8.468,6.852,-65.989)
C5': (-10.452,6.225,-67.217)
P: (-10.753,3.634,-67.299)
C4': (-9.344,7.242,-67.075)
C2': (-7.224,8.056,-67.600)
O2': (-7.493,9.429,-67.403)
N1: (-6.182,6.202,-66.250)
O4: (-3.589,3.129,-66.277)
O2: (-4.394,7.568,-65.756)
C6: (-6.632,4.916,-66.518)
C5: (-5.824,3.852,-66.546)
O3': (-8.962,7.969,-69.353)
Image (generated by PyMOL):