Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:D3:D4
Extra
PDB:
ATOM 1 P G A 3 -0.562 12.396 26.477 1.00 19.63 P
ATOM 2 OP1 G A 3 0.323 13.567 26.275 1.00 24.14 O
ATOM 3 OP2 G A 3 -0.595 11.295 25.496 1.00 22.11 O
ATOM 4 O5' G A 3 -0.187 11.731 27.887 1.00 17.10 O
ATOM 5 C5' G A 3 -0.031 12.549 29.052 1.00 20.57 C
ATOM 6 C4' G A 3 0.261 11.660 30.240 1.00 17.81 C
ATOM 7 O4' G A 3 -0.899 10.842 30.534 1.00 17.70 O
ATOM 8 C3' G A 3 1.354 10.631 29.997 1.00 16.82 C
ATOM 9 O3' G A 3 2.617 11.223 30.157 1.00 16.13 O
ATOM 10 C2' G A 3 1.052 9.661 31.130 1.00 15.56 C
ATOM 11 O2' G A 3 1.392 10.199 32.393 1.00 16.96 O
ATOM 12 C1' G A 3 -0.457 9.578 31.016 1.00 16.89 C
ATOM 13 N9 G A 3 -0.964 8.541 30.118 1.00 12.30 N
ATOM 14 C8 G A 3 -1.457 8.712 28.859 1.00 12.86 C
ATOM 15 N7 G A 3 -1.847 7.589 28.287 1.00 15.37 N
ATOM 16 C5 G A 3 -1.574 6.624 29.251 1.00 14.26 C
ATOM 17 C6 G A 3 -1.790 5.233 29.232 1.00 14.98 C
ATOM 18 O6 G A 3 -2.281 4.573 28.318 1.00 13.46 O
ATOM 19 N1 G A 3 -1.368 4.619 30.415 1.00 12.11 N
ATOM 20 C2 G A 3 -0.822 5.280 31.484 1.00 14.97 C
ATOM 21 N2 G A 3 -0.464 4.551 32.550 1.00 15.62 N
ATOM 22 N3 G A 3 -0.631 6.581 31.512 1.00 14.22 N
ATOM 23 C4 G A 3 -1.031 7.188 30.376 1.00 13.62 C
ATOM 24 P C A 4 3.830 10.779 29.246 1.00 17.80 P
ATOM 25 OP1 C A 4 4.912 11.759 29.506 1.00 23.79 O
ATOM 26 OP2 C A 4 3.422 10.518 27.853 1.00 18.97 O
ATOM 27 O5' C A 4 4.225 9.357 29.883 1.00 20.32 O
TER
ATOM 1 O3' G B 3 2.617 11.223 30.157 1.00 16.13 O
ATOM 2 P C B 4 3.830 10.779 29.246 1.00 17.80 P
ATOM 3 OP1 C B 4 4.912 11.759 29.506 1.00 23.79 O
ATOM 4 OP2 C B 4 3.422 10.518 27.853 1.00 18.97 O
ATOM 5 O5' C B 4 4.225 9.357 29.883 1.00 20.32 O
ATOM 6 C5' C B 4 4.693 9.248 31.221 1.00 19.54 C
ATOM 7 C4' C B 4 4.706 7.794 31.655 1.00 19.13 C
ATOM 8 O4' C B 4 3.355 7.265 31.707 1.00 19.00 O
ATOM 9 C3' C B 4 5.449 6.869 30.714 1.00 22.47 C
ATOM 10 O3' C B 4 6.855 7.060 30.890 1.00 26.22 O
ATOM 11 C2' C B 4 4.922 5.548 31.239 1.00 23.15 C
ATOM 12 O2' C B 4 5.432 5.229 32.523 1.00 22.69 O
ATOM 13 C1' C B 4 3.445 5.890 31.363 1.00 17.52 C
ATOM 14 N1 C B 4 2.690 5.699 30.113 1.00 15.12 N
ATOM 15 C2 C B 4 2.200 4.418 29.877 1.00 17.42 C
ATOM 16 O2 C B 4 2.429 3.518 30.705 1.00 16.76 O
ATOM 17 N3 C B 4 1.487 4.206 28.764 1.00 15.56 N
ATOM 18 C4 C B 4 1.266 5.209 27.903 1.00 14.20 C
ATOM 19 N4 C B 4 0.558 4.927 26.812 1.00 13.60 N
ATOM 20 C5 C B 4 1.757 6.525 28.121 1.00 15.51 C
ATOM 21 C6 C B 4 2.468 6.725 29.241 1.00 16.25 C
ATOM 22 P G B 5 7.956 6.267 30.071 0.50 25.86 P
ATOM 23 OP1 G B 5 9.232 6.496 30.785 0.50 25.14 O
ATOM 24 OP2 G B 5 7.833 6.637 28.641 0.50 22.49 O
ATOM 25 O5' G B 5 7.551 4.735 30.273 0.50 23.91 O
TER
ATOM 2 OP1 G A 3 0.323 13.567 26.275 1.00 24.14 O
ATOM 3 OP2 G A 3 -0.595 11.295 25.496 1.00 22.11 O
ATOM 4 O5' G A 3 -0.187 11.731 27.887 1.00 17.10 O
ATOM 5 C5' G A 3 -0.031 12.549 29.052 1.00 20.57 C
ATOM 6 C4' G A 3 0.261 11.660 30.240 1.00 17.81 C
ATOM 7 O4' G A 3 -0.899 10.842 30.534 1.00 17.70 O
ATOM 8 C3' G A 3 1.354 10.631 29.997 1.00 16.82 C
ATOM 9 O3' G A 3 2.617 11.223 30.157 1.00 16.13 O
ATOM 10 C2' G A 3 1.052 9.661 31.130 1.00 15.56 C
ATOM 11 O2' G A 3 1.392 10.199 32.393 1.00 16.96 O
ATOM 12 C1' G A 3 -0.457 9.578 31.016 1.00 16.89 C
ATOM 13 N9 G A 3 -0.964 8.541 30.118 1.00 12.30 N
ATOM 14 C8 G A 3 -1.457 8.712 28.859 1.00 12.86 C
ATOM 15 N7 G A 3 -1.847 7.589 28.287 1.00 15.37 N
ATOM 16 C5 G A 3 -1.574 6.624 29.251 1.00 14.26 C
ATOM 17 C6 G A 3 -1.790 5.233 29.232 1.00 14.98 C
ATOM 18 O6 G A 3 -2.281 4.573 28.318 1.00 13.46 O
ATOM 19 N1 G A 3 -1.368 4.619 30.415 1.00 12.11 N
ATOM 20 C2 G A 3 -0.822 5.280 31.484 1.00 14.97 C
ATOM 21 N2 G A 3 -0.464 4.551 32.550 1.00 15.62 N
ATOM 22 N3 G A 3 -0.631 6.581 31.512 1.00 14.22 N
ATOM 23 C4 G A 3 -1.031 7.188 30.376 1.00 13.62 C
ATOM 24 P C A 4 3.830 10.779 29.246 1.00 17.80 P
ATOM 25 OP1 C A 4 4.912 11.759 29.506 1.00 23.79 O
ATOM 26 OP2 C A 4 3.422 10.518 27.853 1.00 18.97 O
ATOM 27 O5' C A 4 4.225 9.357 29.883 1.00 20.32 O
TER
ATOM 1 O3' G B 3 2.617 11.223 30.157 1.00 16.13 O
ATOM 2 P C B 4 3.830 10.779 29.246 1.00 17.80 P
ATOM 3 OP1 C B 4 4.912 11.759 29.506 1.00 23.79 O
ATOM 4 OP2 C B 4 3.422 10.518 27.853 1.00 18.97 O
ATOM 5 O5' C B 4 4.225 9.357 29.883 1.00 20.32 O
ATOM 6 C5' C B 4 4.693 9.248 31.221 1.00 19.54 C
ATOM 7 C4' C B 4 4.706 7.794 31.655 1.00 19.13 C
ATOM 8 O4' C B 4 3.355 7.265 31.707 1.00 19.00 O
ATOM 9 C3' C B 4 5.449 6.869 30.714 1.00 22.47 C
ATOM 10 O3' C B 4 6.855 7.060 30.890 1.00 26.22 O
ATOM 11 C2' C B 4 4.922 5.548 31.239 1.00 23.15 C
ATOM 12 O2' C B 4 5.432 5.229 32.523 1.00 22.69 O
ATOM 13 C1' C B 4 3.445 5.890 31.363 1.00 17.52 C
ATOM 14 N1 C B 4 2.690 5.699 30.113 1.00 15.12 N
ATOM 15 C2 C B 4 2.200 4.418 29.877 1.00 17.42 C
ATOM 16 O2 C B 4 2.429 3.518 30.705 1.00 16.76 O
ATOM 17 N3 C B 4 1.487 4.206 28.764 1.00 15.56 N
ATOM 18 C4 C B 4 1.266 5.209 27.903 1.00 14.20 C
ATOM 19 N4 C B 4 0.558 4.927 26.812 1.00 13.60 N
ATOM 20 C5 C B 4 1.757 6.525 28.121 1.00 15.51 C
ATOM 21 C6 C B 4 2.468 6.725 29.241 1.00 16.25 C
ATOM 22 P G B 5 7.956 6.267 30.071 0.50 25.86 P
ATOM 23 OP1 G B 5 9.232 6.496 30.785 0.50 25.14 O
ATOM 24 OP2 G B 5 7.833 6.637 28.641 0.50 22.49 O
ATOM 25 O5' G B 5 7.551 4.735 30.273 0.50 23.91 O
TER
Atoms:
OP1: (0.323,13.567,26.275)
OP2: (-0.595,11.295,25.496)
C3': (1.354,10.631,29.997)
C1': (-0.457,9.578,31.016)
C5': (-0.031,12.549,29.052)
O6: (-2.281,4.573,28.318)
O4': (-0.899,10.842,30.534)
C8: (-1.457,8.712,28.859)
C2: (-0.822,5.280,31.484)
C6: (-1.790,5.233,29.232)
C5: (-1.574,6.624,29.251)
C4: (-1.031,7.188,30.376)
P: (-0.562,12.396,26.477)
C4': (0.261,11.660,30.240)
C2': (1.052,9.661,31.130)
O2': (1.392,10.199,32.393)
N1: (-1.368,4.619,30.415)
N2: (-0.464,4.551,32.550)
N3: (-0.631,6.581,31.512)
N7: (-1.847,7.589,28.287)
N9: (-0.964,8.541,30.118)
O5': (-0.187,11.731,27.887)
O3': (2.617,11.223,30.157)
OP2: (-0.595,11.295,25.496)
C3': (1.354,10.631,29.997)
C1': (-0.457,9.578,31.016)
C5': (-0.031,12.549,29.052)
O6: (-2.281,4.573,28.318)
O4': (-0.899,10.842,30.534)
C8: (-1.457,8.712,28.859)
C2: (-0.822,5.280,31.484)
C6: (-1.790,5.233,29.232)
C5: (-1.574,6.624,29.251)
C4: (-1.031,7.188,30.376)
P: (-0.562,12.396,26.477)
C4': (0.261,11.660,30.240)
C2': (1.052,9.661,31.130)
O2': (1.392,10.199,32.393)
N1: (-1.368,4.619,30.415)
N2: (-0.464,4.551,32.550)
N3: (-0.631,6.581,31.512)
N7: (-1.847,7.589,28.287)
N9: (-0.964,8.541,30.118)
O5': (-0.187,11.731,27.887)
O3': (2.617,11.223,30.157)
C2: (2.200,4.418,29.877)
OP1: (4.912,11.759,29.506)
OP2: (3.422,10.518,27.853)
C4: (1.266,5.209,27.903)
O5': (4.225,9.357,29.883)
C3': (5.449,6.869,30.714)
C1': (3.445,5.890,31.363)
O4': (3.355,7.265,31.707)
C5': (4.693,9.248,31.221)
P: (3.830,10.779,29.246)
O2: (2.429,3.518,30.705)
C4': (4.706,7.794,31.655)
C2': (4.922,5.548,31.239)
O2': (5.432,5.229,32.523)
N1: (2.690,5.699,30.113)
N3: (1.487,4.206,28.764)
N4: (0.558,4.927,26.812)
C6: (2.468,6.725,29.241)
C5: (1.757,6.525,28.121)
O3': (6.855,7.060,30.890)
OP1: (4.912,11.759,29.506)
OP2: (3.422,10.518,27.853)
C4: (1.266,5.209,27.903)
O5': (4.225,9.357,29.883)
C3': (5.449,6.869,30.714)
C1': (3.445,5.890,31.363)
O4': (3.355,7.265,31.707)
C5': (4.693,9.248,31.221)
P: (3.830,10.779,29.246)
O2: (2.429,3.518,30.705)
C4': (4.706,7.794,31.655)
C2': (4.922,5.548,31.239)
O2': (5.432,5.229,32.523)
N1: (2.690,5.699,30.113)
N3: (1.487,4.206,28.764)
N4: (0.558,4.927,26.812)
C6: (2.468,6.725,29.241)
C5: (1.757,6.525,28.121)
O3': (6.855,7.060,30.890)
Image (generated by PyMOL):