Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12886:12887
Extra
PDB:
ATOM 1 O3' C A2885 35.395 34.879 23.853 1.00 53.91 O
ATOM 2 P A A2886 35.770 36.198 24.698 1.00 57.21 P
ATOM 3 OP1 A A2886 37.187 36.019 25.239 1.00 56.92 O
ATOM 4 OP2 A A2886 34.663 36.420 25.664 1.00 57.12 O
ATOM 5 O5' A A2886 35.749 37.312 23.574 1.00 57.80 O
ATOM 6 C5' A A2886 35.676 38.655 23.893 1.00 58.10 C
ATOM 7 C4' A A2886 35.373 39.450 22.676 1.00 58.67 C
ATOM 8 O4' A A2886 34.233 38.881 21.985 1.00 58.78 O
ATOM 9 C3' A A2886 35.005 40.877 22.947 1.00 59.05 C
ATOM 10 O3' A A2886 36.130 41.686 22.967 1.00 59.19 O
ATOM 11 C2' A A2886 34.012 41.229 21.855 1.00 59.52 C
ATOM 12 O2' A A2886 34.683 41.602 20.674 1.00 59.89 O
ATOM 13 C1' A A2886 33.322 39.893 21.632 1.00 59.25 C
ATOM 14 N9 A A2886 32.160 39.743 22.507 1.00 59.08 N
ATOM 15 C8 A A2886 31.972 38.719 23.417 1.00 58.57 C
ATOM 16 N7 A A2886 30.833 38.820 24.071 1.00 58.54 N
ATOM 17 C5 A A2886 30.252 39.985 23.563 1.00 59.07 C
ATOM 18 C6 A A2886 29.060 40.633 23.849 1.00 59.32 C
ATOM 19 N6 A A2886 28.198 40.206 24.750 1.00 59.06 N
ATOM 20 N1 A A2886 28.789 41.757 23.172 1.00 59.87 N
ATOM 21 C2 A A2886 29.652 42.198 22.260 1.00 60.15 C
ATOM 22 N3 A A2886 30.820 41.686 21.883 1.00 59.96 N
ATOM 23 C4 A A2886 31.064 40.569 22.597 1.00 59.41 C
ATOM 24 P U A2887 36.301 42.724 24.145 1.00 52.83 P
ATOM 25 OP1 U A2887 37.565 43.539 23.827 1.00 53.07 O
ATOM 26 OP2 U A2887 36.222 41.939 25.426 1.00 52.28 O
ATOM 27 O5' U A2887 35.005 43.647 23.955 1.00 53.28 O
TER
ATOM 1 O3' A B2886 36.130 41.686 22.967 1.00 59.19 O
ATOM 2 P U B2887 36.301 42.724 24.145 1.00 52.83 P
ATOM 3 OP1 U B2887 37.565 43.539 23.827 1.00 53.07 O
ATOM 4 OP2 U B2887 36.222 41.939 25.426 1.00 52.28 O
ATOM 5 O5' U B2887 35.005 43.647 23.955 1.00 53.28 O
ATOM 6 C5' U B2887 34.889 44.453 22.787 1.00 53.84 C
ATOM 7 C4' U B2887 33.631 45.270 22.755 1.00 54.22 C
ATOM 8 O4' U B2887 32.478 44.409 22.697 1.00 54.07 O
ATOM 9 C3' U B2887 33.359 46.131 23.956 1.00 54.23 C
ATOM 10 O3' U B2887 34.138 47.289 23.990 1.00 54.54 O
ATOM 11 C2' U B2887 31.881 46.401 23.814 1.00 54.50 C
ATOM 12 O2' U B2887 31.652 47.371 22.814 1.00 55.10 O
ATOM 13 C1' U B2887 31.384 45.060 23.295 1.00 54.24 C
ATOM 14 N1 U B2887 30.892 44.232 24.376 1.00 53.74 N
ATOM 15 C2 U B2887 29.660 44.548 24.967 1.00 53.83 C
ATOM 16 O2 U B2887 28.931 45.475 24.626 1.00 54.30 O
ATOM 17 N3 U B2887 29.324 43.711 25.993 1.00 53.34 N
ATOM 18 C4 U B2887 30.075 42.654 26.425 1.00 52.83 C
ATOM 19 O4 U B2887 29.682 41.979 27.363 1.00 52.44 O
ATOM 20 C5 U B2887 31.299 42.422 25.745 1.00 52.79 C
ATOM 21 C6 U B2887 31.678 43.207 24.769 1.00 53.24 C
ATOM 22 P G B2888 34.871 47.691 25.343 1.00 52.32 P
ATOM 23 OP1 G B2888 35.407 49.061 25.159 1.00 52.80 O
ATOM 24 OP2 G B2888 35.802 46.593 25.693 1.00 51.79 O
ATOM 25 O5' G B2888 33.701 47.712 26.382 1.00 52.19 O
TER
ATOM 2 P A A2886 35.770 36.198 24.698 1.00 57.21 P
ATOM 3 OP1 A A2886 37.187 36.019 25.239 1.00 56.92 O
ATOM 4 OP2 A A2886 34.663 36.420 25.664 1.00 57.12 O
ATOM 5 O5' A A2886 35.749 37.312 23.574 1.00 57.80 O
ATOM 6 C5' A A2886 35.676 38.655 23.893 1.00 58.10 C
ATOM 7 C4' A A2886 35.373 39.450 22.676 1.00 58.67 C
ATOM 8 O4' A A2886 34.233 38.881 21.985 1.00 58.78 O
ATOM 9 C3' A A2886 35.005 40.877 22.947 1.00 59.05 C
ATOM 10 O3' A A2886 36.130 41.686 22.967 1.00 59.19 O
ATOM 11 C2' A A2886 34.012 41.229 21.855 1.00 59.52 C
ATOM 12 O2' A A2886 34.683 41.602 20.674 1.00 59.89 O
ATOM 13 C1' A A2886 33.322 39.893 21.632 1.00 59.25 C
ATOM 14 N9 A A2886 32.160 39.743 22.507 1.00 59.08 N
ATOM 15 C8 A A2886 31.972 38.719 23.417 1.00 58.57 C
ATOM 16 N7 A A2886 30.833 38.820 24.071 1.00 58.54 N
ATOM 17 C5 A A2886 30.252 39.985 23.563 1.00 59.07 C
ATOM 18 C6 A A2886 29.060 40.633 23.849 1.00 59.32 C
ATOM 19 N6 A A2886 28.198 40.206 24.750 1.00 59.06 N
ATOM 20 N1 A A2886 28.789 41.757 23.172 1.00 59.87 N
ATOM 21 C2 A A2886 29.652 42.198 22.260 1.00 60.15 C
ATOM 22 N3 A A2886 30.820 41.686 21.883 1.00 59.96 N
ATOM 23 C4 A A2886 31.064 40.569 22.597 1.00 59.41 C
ATOM 24 P U A2887 36.301 42.724 24.145 1.00 52.83 P
ATOM 25 OP1 U A2887 37.565 43.539 23.827 1.00 53.07 O
ATOM 26 OP2 U A2887 36.222 41.939 25.426 1.00 52.28 O
ATOM 27 O5' U A2887 35.005 43.647 23.955 1.00 53.28 O
TER
ATOM 1 O3' A B2886 36.130 41.686 22.967 1.00 59.19 O
ATOM 2 P U B2887 36.301 42.724 24.145 1.00 52.83 P
ATOM 3 OP1 U B2887 37.565 43.539 23.827 1.00 53.07 O
ATOM 4 OP2 U B2887 36.222 41.939 25.426 1.00 52.28 O
ATOM 5 O5' U B2887 35.005 43.647 23.955 1.00 53.28 O
ATOM 6 C5' U B2887 34.889 44.453 22.787 1.00 53.84 C
ATOM 7 C4' U B2887 33.631 45.270 22.755 1.00 54.22 C
ATOM 8 O4' U B2887 32.478 44.409 22.697 1.00 54.07 O
ATOM 9 C3' U B2887 33.359 46.131 23.956 1.00 54.23 C
ATOM 10 O3' U B2887 34.138 47.289 23.990 1.00 54.54 O
ATOM 11 C2' U B2887 31.881 46.401 23.814 1.00 54.50 C
ATOM 12 O2' U B2887 31.652 47.371 22.814 1.00 55.10 O
ATOM 13 C1' U B2887 31.384 45.060 23.295 1.00 54.24 C
ATOM 14 N1 U B2887 30.892 44.232 24.376 1.00 53.74 N
ATOM 15 C2 U B2887 29.660 44.548 24.967 1.00 53.83 C
ATOM 16 O2 U B2887 28.931 45.475 24.626 1.00 54.30 O
ATOM 17 N3 U B2887 29.324 43.711 25.993 1.00 53.34 N
ATOM 18 C4 U B2887 30.075 42.654 26.425 1.00 52.83 C
ATOM 19 O4 U B2887 29.682 41.979 27.363 1.00 52.44 O
ATOM 20 C5 U B2887 31.299 42.422 25.745 1.00 52.79 C
ATOM 21 C6 U B2887 31.678 43.207 24.769 1.00 53.24 C
ATOM 22 P G B2888 34.871 47.691 25.343 1.00 52.32 P
ATOM 23 OP1 G B2888 35.407 49.061 25.159 1.00 52.80 O
ATOM 24 OP2 G B2888 35.802 46.593 25.693 1.00 51.79 O
ATOM 25 O5' G B2888 33.701 47.712 26.382 1.00 52.19 O
TER
Atoms:
OP1: (37.187,36.019,25.239)
OP2: (34.663,36.420,25.664)
C3': (35.005,40.877,22.947)
C1': (33.322,39.893,21.632)
C5': (35.676,38.655,23.893)
O4': (34.233,38.881,21.985)
C8: (31.972,38.719,23.417)
O2': (34.683,41.602,20.674)
C6: (29.060,40.633,23.849)
C5: (30.252,39.985,23.563)
C4: (31.064,40.569,22.597)
P: (35.770,36.198,24.698)
C4': (35.373,39.450,22.676)
C2': (34.012,41.229,21.855)
C2: (29.652,42.198,22.260)
N1: (28.789,41.757,23.172)
N3: (30.820,41.686,21.883)
N6: (28.198,40.206,24.750)
N7: (30.833,38.820,24.071)
N9: (32.160,39.743,22.507)
O5': (35.749,37.312,23.574)
O3': (36.130,41.686,22.967)
OP2: (34.663,36.420,25.664)
C3': (35.005,40.877,22.947)
C1': (33.322,39.893,21.632)
C5': (35.676,38.655,23.893)
O4': (34.233,38.881,21.985)
C8: (31.972,38.719,23.417)
O2': (34.683,41.602,20.674)
C6: (29.060,40.633,23.849)
C5: (30.252,39.985,23.563)
C4: (31.064,40.569,22.597)
P: (35.770,36.198,24.698)
C4': (35.373,39.450,22.676)
C2': (34.012,41.229,21.855)
C2: (29.652,42.198,22.260)
N1: (28.789,41.757,23.172)
N3: (30.820,41.686,21.883)
N6: (28.198,40.206,24.750)
N7: (30.833,38.820,24.071)
N9: (32.160,39.743,22.507)
O5': (35.749,37.312,23.574)
O3': (36.130,41.686,22.967)
C4: (30.075,42.654,26.425)
N3: (29.324,43.711,25.993)
OP1: (37.565,43.539,23.827)
OP2: (36.222,41.939,25.426)
C2: (29.660,44.548,24.967)
C1': (31.384,45.060,23.295)
C3': (33.359,46.131,23.956)
O5': (35.005,43.647,23.955)
O4': (32.478,44.409,22.697)
C5': (34.889,44.453,22.787)
P: (36.301,42.724,24.145)
C4': (33.631,45.270,22.755)
C2': (31.881,46.401,23.814)
O2': (31.652,47.371,22.814)
N1: (30.892,44.232,24.376)
O4: (29.682,41.979,27.363)
O2: (28.931,45.475,24.626)
C6: (31.678,43.207,24.769)
C5: (31.299,42.422,25.745)
O3': (34.138,47.289,23.990)
N3: (29.324,43.711,25.993)
OP1: (37.565,43.539,23.827)
OP2: (36.222,41.939,25.426)
C2: (29.660,44.548,24.967)
C1': (31.384,45.060,23.295)
C3': (33.359,46.131,23.956)
O5': (35.005,43.647,23.955)
O4': (32.478,44.409,22.697)
C5': (34.889,44.453,22.787)
P: (36.301,42.724,24.145)
C4': (33.631,45.270,22.755)
C2': (31.881,46.401,23.814)
O2': (31.652,47.371,22.814)
N1: (30.892,44.232,24.376)
O4: (29.682,41.979,27.363)
O2: (28.931,45.475,24.626)
C6: (31.678,43.207,24.769)
C5: (31.299,42.422,25.745)
O3': (34.138,47.289,23.990)
Image (generated by PyMOL):