ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A891:A892

Extra

PDB:
ATOM 1 O3' A A 890 174.038 118.294 -21.728 1.00 53.91 O
ATOM 2 P A A 891 175.461 119.032 -21.802 1.00 53.98 P
ATOM 3 OP1 A A 891 175.369 119.953 -22.984 1.00 51.75 O
ATOM 4 OP2 A A 891 176.515 118.002 -21.699 1.00 52.30 O
ATOM 5 O5' A A 891 175.569 119.894 -20.452 1.00 54.49 O
ATOM 6 C5' A A 891 174.875 121.145 -20.279 1.00 53.93 C
ATOM 7 C4' A A 891 174.782 121.468 -18.807 1.00 55.33 C
ATOM 8 O4' A A 891 174.297 120.278 -18.130 1.00 54.75 O
ATOM 9 C3' A A 891 176.089 121.789 -18.085 1.00 56.61 C
ATOM 10 O3' A A 891 176.436 123.157 -18.145 1.00 58.50 O
ATOM 11 C2' A A 891 175.791 121.384 -16.648 1.00 55.93 C
ATOM 12 O2' A A 891 175.057 122.369 -15.944 1.00 56.83 O
ATOM 13 C1' A A 891 174.918 120.156 -16.864 1.00 55.30 C
ATOM 14 N9 A A 891 175.736 118.954 -16.878 1.00 55.04 N
ATOM 15 C8 A A 891 176.092 118.166 -17.937 1.00 56.06 C
ATOM 16 N7 A A 891 176.835 117.142 -17.603 1.00 56.49 N
ATOM 17 C5 A A 891 176.979 117.271 -16.235 1.00 56.55 C
ATOM 18 C6 A A 891 177.637 116.497 -15.286 1.00 57.63 C
ATOM 19 N6 A A 891 178.295 115.383 -15.574 1.00 58.75 N
ATOM 20 N1 A A 891 177.587 116.901 -14.002 1.00 60.06 N
ATOM 21 C2 A A 891 176.904 118.007 -13.708 1.00 59.02 C
ATOM 22 N3 A A 891 176.234 118.817 -14.515 1.00 57.40 N
ATOM 23 C4 A A 891 176.312 118.385 -15.778 1.00 56.46 C
ATOM 24 P U A 892 177.938 123.609 -17.786 1.00 59.10 P
ATOM 25 OP1 U A 892 177.983 125.084 -18.036 1.00 58.17 O
ATOM 26 OP2 U A 892 178.841 122.681 -18.487 1.00 60.84 O
ATOM 27 O5' U A 892 178.098 123.340 -16.237 1.00 57.92 O
TER

ATOM 1 O3' A B 891 176.436 123.157 -18.145 1.00 58.50 O
ATOM 2 P U B 892 177.938 123.609 -17.786 1.00 59.10 P
ATOM 3 OP1 U B 892 177.983 125.084 -18.036 1.00 58.17 O
ATOM 4 OP2 U B 892 178.841 122.681 -18.487 1.00 60.84 O
ATOM 5 O5' U B 892 178.098 123.340 -16.237 1.00 57.92 O
ATOM 6 C5' U B 892 177.365 124.116 -15.292 1.00 58.37 C
ATOM 7 C4' U B 892 177.939 123.933 -13.920 1.00 57.61 C
ATOM 8 O4' U B 892 177.766 122.564 -13.482 1.00 58.51 O
ATOM 9 C3' U B 892 179.427 124.151 -13.830 1.00 57.95 C
ATOM 10 O3' U B 892 179.743 125.510 -13.776 1.00 58.69 O
ATOM 11 C2' U B 892 179.806 123.374 -12.579 1.00 57.15 C
ATOM 12 O2' U B 892 179.535 124.097 -11.400 1.00 55.98 O
ATOM 13 C1' U B 892 178.855 122.184 -12.663 1.00 57.73 C
ATOM 14 N1 U B 892 179.448 120.945 -13.200 1.00 60.65 N
ATOM 15 C2 U B 892 180.079 120.093 -12.294 1.00 64.02 C
ATOM 16 O2 U B 892 180.234 120.363 -11.113 1.00 67.90 O
ATOM 17 N3 U B 892 180.539 118.915 -12.823 1.00 65.19 N
ATOM 18 C4 U B 892 180.468 118.505 -14.132 1.00 64.35 C
ATOM 19 O4 U B 892 180.899 117.381 -14.431 1.00 64.98 O
ATOM 20 C5 U B 892 179.845 119.451 -15.022 1.00 61.57 C
ATOM 21 C6 U B 892 179.370 120.610 -14.538 1.00 59.74 C
ATOM 22 P U B 893 181.184 125.997 -14.296 1.00 59.75 P
ATOM 23 OP1 U B 893 181.129 127.504 -14.354 1.00 55.39 O
ATOM 24 OP2 U B 893 181.530 125.233 -15.532 1.00 60.32 O
ATOM 25 O5' U B 893 182.148 125.517 -13.126 1.00 56.40 O
TER

Atoms:
OP1: (175.369,119.953,-22.984)
OP2: (176.515,118.002,-21.699)
C3': (176.089,121.789,-18.085)
C1': (174.918,120.156,-16.864)
C5': (174.875,121.145,-20.279)
O4': (174.297,120.278,-18.130)
C8: (176.092,118.166,-17.937)
O2': (175.057,122.369,-15.944)
C6: (177.637,116.497,-15.286)
C5: (176.979,117.271,-16.235)
C4: (176.312,118.385,-15.778)
P: (175.461,119.032,-21.802)
C4': (174.782,121.468,-18.807)
C2': (175.791,121.384,-16.648)
C2: (176.904,118.007,-13.708)
N1: (177.587,116.901,-14.002)
N3: (176.234,118.817,-14.515)
N6: (178.295,115.383,-15.574)
N7: (176.835,117.142,-17.603)
N9: (175.736,118.954,-16.878)
O5': (175.569,119.894,-20.452)
O3': (176.436,123.157,-18.145)
C4: (180.468,118.505,-14.132)
N3: (180.539,118.915,-12.823)
OP1: (177.983,125.084,-18.036)
OP2: (178.841,122.681,-18.487)
C2: (180.079,120.093,-12.294)
C1': (178.855,122.184,-12.663)
C3': (179.427,124.151,-13.830)
O5': (178.098,123.340,-16.237)
O4': (177.766,122.564,-13.482)
C5': (177.365,124.116,-15.292)
P: (177.938,123.609,-17.786)
C4': (177.939,123.933,-13.920)
C2': (179.806,123.374,-12.579)
O2': (179.535,124.097,-11.400)
N1: (179.448,120.945,-13.200)
O4: (180.899,117.381,-14.431)
O2: (180.234,120.363,-11.113)
C6: (179.370,120.610,-14.538)
C5: (179.845,119.451,-15.022)
O3': (179.743,125.510,-13.776)
Image (generated by PyMOL):
PyMOL image
show in jmol