Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02110:02111
Extra
PDB:
ATOM 1 O3' G A2109 98.571 111.327 42.760 1.00 53.97 O
ATOM 2 P A A2110 98.065 110.573 44.083 1.00 53.39 P
ATOM 3 OP1 A A2110 96.584 110.676 44.076 1.00 51.68 O
ATOM 4 OP2 A A2110 98.832 111.109 45.241 1.00 52.29 O
ATOM 5 O5' A A2110 98.491 109.052 43.841 1.00 53.56 O
ATOM 6 C5' A A2110 97.812 108.239 42.853 1.00 52.85 C
ATOM 7 C4' A A2110 98.406 106.847 42.792 1.00 52.10 C
ATOM 8 O4' A A2110 99.797 106.928 42.388 1.00 53.03 O
ATOM 9 C3' A A2110 98.450 106.041 44.080 1.00 52.70 C
ATOM 10 O3' A A2110 97.188 105.438 44.373 1.00 55.36 O
ATOM 11 C2' A A2110 99.525 105.005 43.763 1.00 52.57 C
ATOM 12 O2' A A2110 99.078 103.934 42.957 1.00 53.71 O
ATOM 13 C1' A A2110 100.521 105.843 42.956 1.00 52.45 C
ATOM 14 N9 A A2110 101.597 106.369 43.800 1.00 50.21 N
ATOM 15 C8 A A2110 101.691 107.598 44.403 1.00 49.75 C
ATOM 16 N7 A A2110 102.757 107.736 45.153 1.00 49.39 N
ATOM 17 C5 A A2110 103.418 106.522 45.024 1.00 48.59 C
ATOM 18 C6 A A2110 104.616 106.026 45.582 1.00 47.96 C
ATOM 19 N6 A A2110 105.385 106.716 46.424 1.00 49.31 N
ATOM 20 N1 A A2110 104.997 104.780 45.244 1.00 47.41 N
ATOM 21 C2 A A2110 104.219 104.082 44.410 1.00 48.75 C
ATOM 22 N3 A A2110 103.070 104.432 43.828 1.00 47.55 N
ATOM 23 C4 A A2110 102.722 105.678 44.180 1.00 48.12 C
ATOM 24 P U A2111 96.771 105.116 45.903 1.00 55.32 P
ATOM 25 OP1 U A2111 95.363 104.653 45.834 1.00 54.53 O
ATOM 26 OP2 U A2111 97.122 106.274 46.777 1.00 53.65 O
ATOM 27 O5' U A2111 97.687 103.874 46.312 1.00 53.40 O
TER
ATOM 1 O3' A B2110 97.188 105.438 44.373 1.00 55.36 O
ATOM 2 P U B2111 96.771 105.116 45.903 1.00 55.32 P
ATOM 3 OP1 U B2111 95.363 104.653 45.834 1.00 54.53 O
ATOM 4 OP2 U B2111 97.122 106.274 46.777 1.00 53.65 O
ATOM 5 O5' U B2111 97.687 103.874 46.312 1.00 53.40 O
ATOM 6 C5' U B2111 97.614 102.631 45.591 1.00 54.77 C
ATOM 7 C4' U B2111 98.813 101.762 45.906 1.00 58.13 C
ATOM 8 O4' U B2111 100.034 102.434 45.490 1.00 58.31 O
ATOM 9 C3' U B2111 99.050 101.428 47.371 1.00 59.30 C
ATOM 10 O3' U B2111 98.244 100.332 47.804 1.00 61.06 O
ATOM 11 C2' U B2111 100.537 101.088 47.390 1.00 59.44 C
ATOM 12 O2' U B2111 100.817 99.771 46.953 1.00 59.37 O
ATOM 13 C1' U B2111 101.092 102.096 46.379 1.00 58.87 C
ATOM 14 N1 U B2111 101.589 103.332 47.006 1.00 60.02 N
ATOM 15 C2 U B2111 102.813 103.289 47.652 1.00 61.21 C
ATOM 16 O2 U B2111 103.494 102.282 47.714 1.00 63.07 O
ATOM 17 N3 U B2111 103.208 104.472 48.226 1.00 61.58 N
ATOM 18 C4 U B2111 102.516 105.667 48.221 1.00 62.60 C
ATOM 19 O4 U B2111 102.960 106.630 48.848 1.00 64.35 O
ATOM 20 C5 U B2111 101.273 105.632 47.524 1.00 61.92 C
ATOM 21 C6 U B2111 100.861 104.498 46.957 1.00 61.26 C
ATOM 22 P A B2112 97.834 100.196 49.358 1.00 63.71 P
ATOM 23 OP1 A B2112 96.742 99.186 49.420 1.00 63.78 O
ATOM 24 OP2 A B2112 97.624 101.558 49.936 1.00 61.86 O
ATOM 25 O5' A B2112 99.109 99.568 50.078 1.00 61.50 O
TER
ATOM 2 P A A2110 98.065 110.573 44.083 1.00 53.39 P
ATOM 3 OP1 A A2110 96.584 110.676 44.076 1.00 51.68 O
ATOM 4 OP2 A A2110 98.832 111.109 45.241 1.00 52.29 O
ATOM 5 O5' A A2110 98.491 109.052 43.841 1.00 53.56 O
ATOM 6 C5' A A2110 97.812 108.239 42.853 1.00 52.85 C
ATOM 7 C4' A A2110 98.406 106.847 42.792 1.00 52.10 C
ATOM 8 O4' A A2110 99.797 106.928 42.388 1.00 53.03 O
ATOM 9 C3' A A2110 98.450 106.041 44.080 1.00 52.70 C
ATOM 10 O3' A A2110 97.188 105.438 44.373 1.00 55.36 O
ATOM 11 C2' A A2110 99.525 105.005 43.763 1.00 52.57 C
ATOM 12 O2' A A2110 99.078 103.934 42.957 1.00 53.71 O
ATOM 13 C1' A A2110 100.521 105.843 42.956 1.00 52.45 C
ATOM 14 N9 A A2110 101.597 106.369 43.800 1.00 50.21 N
ATOM 15 C8 A A2110 101.691 107.598 44.403 1.00 49.75 C
ATOM 16 N7 A A2110 102.757 107.736 45.153 1.00 49.39 N
ATOM 17 C5 A A2110 103.418 106.522 45.024 1.00 48.59 C
ATOM 18 C6 A A2110 104.616 106.026 45.582 1.00 47.96 C
ATOM 19 N6 A A2110 105.385 106.716 46.424 1.00 49.31 N
ATOM 20 N1 A A2110 104.997 104.780 45.244 1.00 47.41 N
ATOM 21 C2 A A2110 104.219 104.082 44.410 1.00 48.75 C
ATOM 22 N3 A A2110 103.070 104.432 43.828 1.00 47.55 N
ATOM 23 C4 A A2110 102.722 105.678 44.180 1.00 48.12 C
ATOM 24 P U A2111 96.771 105.116 45.903 1.00 55.32 P
ATOM 25 OP1 U A2111 95.363 104.653 45.834 1.00 54.53 O
ATOM 26 OP2 U A2111 97.122 106.274 46.777 1.00 53.65 O
ATOM 27 O5' U A2111 97.687 103.874 46.312 1.00 53.40 O
TER
ATOM 1 O3' A B2110 97.188 105.438 44.373 1.00 55.36 O
ATOM 2 P U B2111 96.771 105.116 45.903 1.00 55.32 P
ATOM 3 OP1 U B2111 95.363 104.653 45.834 1.00 54.53 O
ATOM 4 OP2 U B2111 97.122 106.274 46.777 1.00 53.65 O
ATOM 5 O5' U B2111 97.687 103.874 46.312 1.00 53.40 O
ATOM 6 C5' U B2111 97.614 102.631 45.591 1.00 54.77 C
ATOM 7 C4' U B2111 98.813 101.762 45.906 1.00 58.13 C
ATOM 8 O4' U B2111 100.034 102.434 45.490 1.00 58.31 O
ATOM 9 C3' U B2111 99.050 101.428 47.371 1.00 59.30 C
ATOM 10 O3' U B2111 98.244 100.332 47.804 1.00 61.06 O
ATOM 11 C2' U B2111 100.537 101.088 47.390 1.00 59.44 C
ATOM 12 O2' U B2111 100.817 99.771 46.953 1.00 59.37 O
ATOM 13 C1' U B2111 101.092 102.096 46.379 1.00 58.87 C
ATOM 14 N1 U B2111 101.589 103.332 47.006 1.00 60.02 N
ATOM 15 C2 U B2111 102.813 103.289 47.652 1.00 61.21 C
ATOM 16 O2 U B2111 103.494 102.282 47.714 1.00 63.07 O
ATOM 17 N3 U B2111 103.208 104.472 48.226 1.00 61.58 N
ATOM 18 C4 U B2111 102.516 105.667 48.221 1.00 62.60 C
ATOM 19 O4 U B2111 102.960 106.630 48.848 1.00 64.35 O
ATOM 20 C5 U B2111 101.273 105.632 47.524 1.00 61.92 C
ATOM 21 C6 U B2111 100.861 104.498 46.957 1.00 61.26 C
ATOM 22 P A B2112 97.834 100.196 49.358 1.00 63.71 P
ATOM 23 OP1 A B2112 96.742 99.186 49.420 1.00 63.78 O
ATOM 24 OP2 A B2112 97.624 101.558 49.936 1.00 61.86 O
ATOM 25 O5' A B2112 99.109 99.568 50.078 1.00 61.50 O
TER
Atoms:
OP1: (96.584,110.676,44.076)
OP2: (98.832,111.109,45.241)
C3': (98.450,106.041,44.080)
C1': (100.521,105.843,42.956)
C5': (97.812,108.239,42.853)
O4': (99.797,106.928,42.388)
C8: (101.691,107.598,44.403)
O2': (99.078,103.934,42.957)
C6: (104.616,106.026,45.582)
C5: (103.418,106.522,45.024)
C4: (102.722,105.678,44.180)
P: (98.065,110.573,44.083)
C4': (98.406,106.847,42.792)
C2': (99.525,105.005,43.763)
C2: (104.219,104.082,44.410)
N1: (104.997,104.780,45.244)
N3: (103.070,104.432,43.828)
N6: (105.385,106.716,46.424)
N7: (102.757,107.736,45.153)
N9: (101.597,106.369,43.800)
O5': (98.491,109.052,43.841)
O3': (97.188,105.438,44.373)
OP2: (98.832,111.109,45.241)
C3': (98.450,106.041,44.080)
C1': (100.521,105.843,42.956)
C5': (97.812,108.239,42.853)
O4': (99.797,106.928,42.388)
C8: (101.691,107.598,44.403)
O2': (99.078,103.934,42.957)
C6: (104.616,106.026,45.582)
C5: (103.418,106.522,45.024)
C4: (102.722,105.678,44.180)
P: (98.065,110.573,44.083)
C4': (98.406,106.847,42.792)
C2': (99.525,105.005,43.763)
C2: (104.219,104.082,44.410)
N1: (104.997,104.780,45.244)
N3: (103.070,104.432,43.828)
N6: (105.385,106.716,46.424)
N7: (102.757,107.736,45.153)
N9: (101.597,106.369,43.800)
O5': (98.491,109.052,43.841)
O3': (97.188,105.438,44.373)
C4: (102.516,105.667,48.221)
N3: (103.208,104.472,48.226)
OP1: (95.363,104.653,45.834)
OP2: (97.122,106.274,46.777)
C2: (102.813,103.289,47.652)
C1': (101.092,102.096,46.379)
C3': (99.050,101.428,47.371)
O5': (97.687,103.874,46.312)
O4': (100.034,102.434,45.490)
C5': (97.614,102.631,45.591)
P: (96.771,105.116,45.903)
C4': (98.813,101.762,45.906)
C2': (100.537,101.088,47.390)
O2': (100.817,99.771,46.953)
N1: (101.589,103.332,47.006)
O4: (102.960,106.630,48.848)
O2: (103.494,102.282,47.714)
C6: (100.861,104.498,46.957)
C5: (101.273,105.632,47.524)
O3': (98.244,100.332,47.804)
N3: (103.208,104.472,48.226)
OP1: (95.363,104.653,45.834)
OP2: (97.122,106.274,46.777)
C2: (102.813,103.289,47.652)
C1': (101.092,102.096,46.379)
C3': (99.050,101.428,47.371)
O5': (97.687,103.874,46.312)
O4': (100.034,102.434,45.490)
C5': (97.614,102.631,45.591)
P: (96.771,105.116,45.903)
C4': (98.813,101.762,45.906)
C2': (100.537,101.088,47.390)
O2': (100.817,99.771,46.953)
N1: (101.589,103.332,47.006)
O4: (102.960,106.630,48.848)
O2: (103.494,102.282,47.714)
C6: (100.861,104.498,46.957)
C5: (101.273,105.632,47.524)
O3': (98.244,100.332,47.804)
Image (generated by PyMOL):