Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYW:E2:E3
Extra
PDB:
ATOM 1 O3' A A 1 -59.792 -8.283 24.790 1.00 37.50 O
ATOM 2 P A A 2 -58.404 -7.578 25.183 1.00 37.59 P
ATOM 3 OP1 A A 2 -58.484 -6.143 24.817 1.00 34.22 O
ATOM 4 OP2 A A 2 -57.309 -8.419 24.634 1.00 32.33 O
ATOM 5 O5' A A 2 -58.364 -7.679 26.770 1.00 29.28 O
ATOM 6 C5' A A 2 -59.375 -7.070 27.558 1.00 28.41 C
ATOM 7 C4' A A 2 -59.190 -7.433 29.008 1.00 35.72 C
ATOM 8 O4' A A 2 -59.421 -8.853 29.194 1.00 39.16 O
ATOM 9 C3' A A 2 -57.793 -7.198 29.552 1.00 33.43 C
ATOM 10 O3' A A 2 -57.661 -5.851 29.976 1.00 32.04 O
ATOM 11 C2' A A 2 -57.745 -8.168 30.722 1.00 44.86 C
ATOM 12 O2' A A 2 -58.413 -7.656 31.857 1.00 50.68 O
ATOM 13 C1' A A 2 -58.513 -9.364 30.153 1.00 39.73 C
ATOM 14 N9 A A 2 -57.652 -10.324 29.468 1.00 37.99 N
ATOM 15 C8 A A 2 -57.393 -10.382 28.123 1.00 37.59 C
ATOM 16 N7 A A 2 -56.578 -11.350 27.782 1.00 44.21 N
ATOM 17 C5 A A 2 -56.280 -11.972 28.986 1.00 35.18 C
ATOM 18 C6 A A 2 -55.471 -13.071 29.301 1.00 24.61 C
ATOM 19 N6 A A 2 -54.784 -13.764 28.394 1.00 26.71 N
ATOM 20 N1 A A 2 -55.390 -13.440 30.595 1.00 23.77 N
ATOM 21 C2 A A 2 -56.080 -12.744 31.502 1.00 30.04 C
ATOM 22 N3 A A 2 -56.875 -11.692 31.330 1.00 40.69 N
ATOM 23 C4 A A 2 -56.934 -11.351 30.033 1.00 39.34 C
ATOM 24 P U A 3 -56.211 -5.169 30.017 1.00 34.79 P
ATOM 25 OP1 U A 3 -56.394 -3.706 30.175 1.00 31.68 O
ATOM 26 OP2 U A 3 -55.429 -5.687 28.872 1.00 34.85 O
ATOM 27 O5' U A 3 -55.584 -5.745 31.360 1.00 35.26 O
TER
ATOM 1 O3' A B 2 -57.661 -5.851 29.976 1.00 32.04 O
ATOM 2 P U B 3 -56.211 -5.169 30.017 1.00 34.79 P
ATOM 3 OP1 U B 3 -56.394 -3.706 30.175 1.00 31.68 O
ATOM 4 OP2 U B 3 -55.429 -5.687 28.872 1.00 34.85 O
ATOM 5 O5' U B 3 -55.584 -5.745 31.360 1.00 35.26 O
ATOM 6 C5' U B 3 -56.142 -5.394 32.618 1.00 39.08 C
ATOM 7 C4' U B 3 -55.441 -6.135 33.727 1.00 40.58 C
ATOM 8 O4' U B 3 -55.774 -7.546 33.663 1.00 35.50 O
ATOM 9 C3' U B 3 -53.925 -6.118 33.673 1.00 37.80 C
ATOM 10 O3' U B 3 -53.396 -4.913 34.201 1.00 42.55 O
ATOM 11 C2' U B 3 -53.575 -7.324 34.531 1.00 37.27 C
ATOM 12 O2' U B 3 -53.679 -7.048 35.914 1.00 27.00 O
ATOM 13 C1' U B 3 -54.666 -8.311 34.110 1.00 34.50 C
ATOM 14 N1 U B 3 -54.239 -9.180 33.006 1.00 29.11 N
ATOM 15 C2 U B 3 -53.517 -10.310 33.328 1.00 27.65 C
ATOM 16 O2 U B 3 -53.248 -10.612 34.477 1.00 31.81 O
ATOM 17 N3 U B 3 -53.126 -11.073 32.256 1.00 25.28 N
ATOM 18 C4 U B 3 -53.389 -10.827 30.925 1.00 25.43 C
ATOM 19 O4 U B 3 -52.983 -11.615 30.075 1.00 26.66 O
ATOM 20 C5 U B 3 -54.149 -9.641 30.675 1.00 24.63 C
ATOM 21 C6 U B 3 -54.539 -8.877 31.700 1.00 20.90 C
ATOM 22 P A B 4 -52.032 -4.325 33.598 1.00 52.53 P
ATOM 23 OP1 A B 4 -51.785 -2.991 34.195 1.00 53.72 O
ATOM 24 OP2 A B 4 -52.097 -4.466 32.122 1.00 53.54 O
ATOM 25 O5' A B 4 -50.930 -5.336 34.132 1.00 49.15 O
TER
ATOM 2 P A A 2 -58.404 -7.578 25.183 1.00 37.59 P
ATOM 3 OP1 A A 2 -58.484 -6.143 24.817 1.00 34.22 O
ATOM 4 OP2 A A 2 -57.309 -8.419 24.634 1.00 32.33 O
ATOM 5 O5' A A 2 -58.364 -7.679 26.770 1.00 29.28 O
ATOM 6 C5' A A 2 -59.375 -7.070 27.558 1.00 28.41 C
ATOM 7 C4' A A 2 -59.190 -7.433 29.008 1.00 35.72 C
ATOM 8 O4' A A 2 -59.421 -8.853 29.194 1.00 39.16 O
ATOM 9 C3' A A 2 -57.793 -7.198 29.552 1.00 33.43 C
ATOM 10 O3' A A 2 -57.661 -5.851 29.976 1.00 32.04 O
ATOM 11 C2' A A 2 -57.745 -8.168 30.722 1.00 44.86 C
ATOM 12 O2' A A 2 -58.413 -7.656 31.857 1.00 50.68 O
ATOM 13 C1' A A 2 -58.513 -9.364 30.153 1.00 39.73 C
ATOM 14 N9 A A 2 -57.652 -10.324 29.468 1.00 37.99 N
ATOM 15 C8 A A 2 -57.393 -10.382 28.123 1.00 37.59 C
ATOM 16 N7 A A 2 -56.578 -11.350 27.782 1.00 44.21 N
ATOM 17 C5 A A 2 -56.280 -11.972 28.986 1.00 35.18 C
ATOM 18 C6 A A 2 -55.471 -13.071 29.301 1.00 24.61 C
ATOM 19 N6 A A 2 -54.784 -13.764 28.394 1.00 26.71 N
ATOM 20 N1 A A 2 -55.390 -13.440 30.595 1.00 23.77 N
ATOM 21 C2 A A 2 -56.080 -12.744 31.502 1.00 30.04 C
ATOM 22 N3 A A 2 -56.875 -11.692 31.330 1.00 40.69 N
ATOM 23 C4 A A 2 -56.934 -11.351 30.033 1.00 39.34 C
ATOM 24 P U A 3 -56.211 -5.169 30.017 1.00 34.79 P
ATOM 25 OP1 U A 3 -56.394 -3.706 30.175 1.00 31.68 O
ATOM 26 OP2 U A 3 -55.429 -5.687 28.872 1.00 34.85 O
ATOM 27 O5' U A 3 -55.584 -5.745 31.360 1.00 35.26 O
TER
ATOM 1 O3' A B 2 -57.661 -5.851 29.976 1.00 32.04 O
ATOM 2 P U B 3 -56.211 -5.169 30.017 1.00 34.79 P
ATOM 3 OP1 U B 3 -56.394 -3.706 30.175 1.00 31.68 O
ATOM 4 OP2 U B 3 -55.429 -5.687 28.872 1.00 34.85 O
ATOM 5 O5' U B 3 -55.584 -5.745 31.360 1.00 35.26 O
ATOM 6 C5' U B 3 -56.142 -5.394 32.618 1.00 39.08 C
ATOM 7 C4' U B 3 -55.441 -6.135 33.727 1.00 40.58 C
ATOM 8 O4' U B 3 -55.774 -7.546 33.663 1.00 35.50 O
ATOM 9 C3' U B 3 -53.925 -6.118 33.673 1.00 37.80 C
ATOM 10 O3' U B 3 -53.396 -4.913 34.201 1.00 42.55 O
ATOM 11 C2' U B 3 -53.575 -7.324 34.531 1.00 37.27 C
ATOM 12 O2' U B 3 -53.679 -7.048 35.914 1.00 27.00 O
ATOM 13 C1' U B 3 -54.666 -8.311 34.110 1.00 34.50 C
ATOM 14 N1 U B 3 -54.239 -9.180 33.006 1.00 29.11 N
ATOM 15 C2 U B 3 -53.517 -10.310 33.328 1.00 27.65 C
ATOM 16 O2 U B 3 -53.248 -10.612 34.477 1.00 31.81 O
ATOM 17 N3 U B 3 -53.126 -11.073 32.256 1.00 25.28 N
ATOM 18 C4 U B 3 -53.389 -10.827 30.925 1.00 25.43 C
ATOM 19 O4 U B 3 -52.983 -11.615 30.075 1.00 26.66 O
ATOM 20 C5 U B 3 -54.149 -9.641 30.675 1.00 24.63 C
ATOM 21 C6 U B 3 -54.539 -8.877 31.700 1.00 20.90 C
ATOM 22 P A B 4 -52.032 -4.325 33.598 1.00 52.53 P
ATOM 23 OP1 A B 4 -51.785 -2.991 34.195 1.00 53.72 O
ATOM 24 OP2 A B 4 -52.097 -4.466 32.122 1.00 53.54 O
ATOM 25 O5' A B 4 -50.930 -5.336 34.132 1.00 49.15 O
TER
Atoms:
OP1: (-58.484,-6.143,24.817)
OP2: (-57.309,-8.419,24.634)
C3': (-57.793,-7.198,29.552)
C1': (-58.513,-9.364,30.153)
C5': (-59.375,-7.070,27.558)
O4': (-59.421,-8.853,29.194)
C8: (-57.393,-10.382,28.123)
O2': (-58.413,-7.656,31.857)
C6: (-55.471,-13.071,29.301)
C5: (-56.280,-11.972,28.986)
C4: (-56.934,-11.351,30.033)
P: (-58.404,-7.578,25.183)
C4': (-59.190,-7.433,29.008)
C2': (-57.745,-8.168,30.722)
C2: (-56.080,-12.744,31.502)
N1: (-55.390,-13.440,30.595)
N3: (-56.875,-11.692,31.330)
N6: (-54.784,-13.764,28.394)
N7: (-56.578,-11.350,27.782)
N9: (-57.652,-10.324,29.468)
O5': (-58.364,-7.679,26.770)
O3': (-57.661,-5.851,29.976)
OP2: (-57.309,-8.419,24.634)
C3': (-57.793,-7.198,29.552)
C1': (-58.513,-9.364,30.153)
C5': (-59.375,-7.070,27.558)
O4': (-59.421,-8.853,29.194)
C8: (-57.393,-10.382,28.123)
O2': (-58.413,-7.656,31.857)
C6: (-55.471,-13.071,29.301)
C5: (-56.280,-11.972,28.986)
C4: (-56.934,-11.351,30.033)
P: (-58.404,-7.578,25.183)
C4': (-59.190,-7.433,29.008)
C2': (-57.745,-8.168,30.722)
C2: (-56.080,-12.744,31.502)
N1: (-55.390,-13.440,30.595)
N3: (-56.875,-11.692,31.330)
N6: (-54.784,-13.764,28.394)
N7: (-56.578,-11.350,27.782)
N9: (-57.652,-10.324,29.468)
O5': (-58.364,-7.679,26.770)
O3': (-57.661,-5.851,29.976)
C4: (-53.389,-10.827,30.925)
N3: (-53.126,-11.073,32.256)
OP1: (-56.394,-3.706,30.175)
OP2: (-55.429,-5.687,28.872)
C2: (-53.517,-10.310,33.328)
C1': (-54.666,-8.311,34.110)
C3': (-53.925,-6.118,33.673)
O5': (-55.584,-5.745,31.360)
O4': (-55.774,-7.546,33.663)
C5': (-56.142,-5.394,32.618)
P: (-56.211,-5.169,30.017)
C4': (-55.441,-6.135,33.727)
C2': (-53.575,-7.324,34.531)
O2': (-53.679,-7.048,35.914)
N1: (-54.239,-9.180,33.006)
O4: (-52.983,-11.615,30.075)
O2: (-53.248,-10.612,34.477)
C6: (-54.539,-8.877,31.700)
C5: (-54.149,-9.641,30.675)
O3': (-53.396,-4.913,34.201)
N3: (-53.126,-11.073,32.256)
OP1: (-56.394,-3.706,30.175)
OP2: (-55.429,-5.687,28.872)
C2: (-53.517,-10.310,33.328)
C1': (-54.666,-8.311,34.110)
C3': (-53.925,-6.118,33.673)
O5': (-55.584,-5.745,31.360)
O4': (-55.774,-7.546,33.663)
C5': (-56.142,-5.394,32.618)
P: (-56.211,-5.169,30.017)
C4': (-55.441,-6.135,33.727)
C2': (-53.575,-7.324,34.531)
O2': (-53.679,-7.048,35.914)
N1: (-54.239,-9.180,33.006)
O4: (-52.983,-11.615,30.075)
O2: (-53.248,-10.612,34.477)
C6: (-54.539,-8.877,31.700)
C5: (-54.149,-9.641,30.675)
O3': (-53.396,-4.913,34.201)
Image (generated by PyMOL):