ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:E82:E83

Extra

PDB:
ATOM 1 O3' U A 81 34.521 19.593 -21.627 1.00 90.13 O
ATOM 2 P A A 82 35.906 19.390 -22.407 1.00 89.58 P
ATOM 3 OP1 A A 82 36.282 20.694 -22.996 1.00 89.36 O
ATOM 4 OP2 A A 82 35.773 18.198 -23.273 1.00 85.81 O
ATOM 5 O5' A A 82 36.941 19.044 -21.236 1.00 73.51 O
ATOM 6 C5' A A 82 37.204 20.002 -20.218 1.00 68.47 C
ATOM 7 C4' A A 82 38.220 19.470 -19.226 1.00 70.11 C
ATOM 8 O4' A A 82 37.580 18.571 -18.285 1.00 79.23 O
ATOM 9 C3' A A 82 39.329 18.632 -19.838 1.00 81.37 C
ATOM 10 O3' A A 82 40.346 19.460 -20.381 1.00 90.99 O
ATOM 11 C2' A A 82 39.797 17.855 -18.613 1.00 78.45 C
ATOM 12 O2' A A 82 40.550 18.645 -17.716 1.00 84.52 O
ATOM 13 C1' A A 82 38.453 17.492 -17.994 1.00 79.03 C
ATOM 14 N9 A A 82 37.898 16.259 -18.551 1.00 85.64 N
ATOM 15 C8 A A 82 37.082 16.136 -19.642 1.00 78.54 C
ATOM 16 N7 A A 82 36.744 14.898 -19.916 1.00 74.50 N
ATOM 17 C5 A A 82 37.385 14.155 -18.938 1.00 80.19 C
ATOM 18 C6 A A 82 37.430 12.772 -18.672 1.00 81.54 C
ATOM 19 N6 A A 82 36.785 11.860 -19.407 1.00 79.92 N
ATOM 20 N1 A A 82 38.165 12.360 -17.617 1.00 72.71 N
ATOM 21 C2 A A 82 38.808 13.275 -16.882 1.00 74.58 C
ATOM 22 N3 A A 82 38.841 14.599 -17.034 1.00 80.54 N
ATOM 23 C4 A A 82 38.102 14.978 -18.089 1.00 80.54 C
ATOM 24 P U A 83 41.559 18.797 -21.187 1.00 93.65 P
ATOM 25 OP1 U A 83 41.949 19.717 -22.280 1.00 82.86 O
ATOM 26 OP2 U A 83 41.204 17.395 -21.501 1.00 77.42 O
ATOM 27 O5' U A 83 42.714 18.785 -20.084 1.00 87.25 O
TER

ATOM 1 O3' A B 82 40.346 19.460 -20.381 1.00 90.99 O
ATOM 2 P U B 83 41.559 18.797 -21.187 1.00 93.65 P
ATOM 3 OP1 U B 83 41.949 19.717 -22.280 1.00 82.86 O
ATOM 4 OP2 U B 83 41.204 17.395 -21.501 1.00 77.42 O
ATOM 5 O5' U B 83 42.714 18.785 -20.084 1.00 87.25 O
ATOM 6 C5' U B 83 43.770 17.851 -20.197 1.00 90.46 C
ATOM 7 C4' U B 83 43.814 16.913 -19.005 1.00 90.54 C
ATOM 8 O4' U B 83 42.493 16.428 -18.652 1.00 82.38 O
ATOM 9 C3' U B 83 44.597 15.638 -19.255 1.00 91.28 C
ATOM 10 O3' U B 83 45.980 15.907 -19.177 1.00 86.11 O
ATOM 11 C2' U B 83 44.105 14.786 -18.097 1.00 85.41 C
ATOM 12 O2' U B 83 44.669 15.189 -16.864 1.00 86.78 O
ATOM 13 C1' U B 83 42.613 15.112 -18.136 1.00 83.04 C
ATOM 14 N1 U B 83 41.833 14.193 -19.012 1.00 74.97 N
ATOM 15 C2 U B 83 41.814 12.840 -18.742 1.00 70.30 C
ATOM 16 O2 U B 83 42.410 12.333 -17.808 1.00 64.26 O
ATOM 17 N3 U B 83 41.064 12.088 -19.613 1.00 67.69 N
ATOM 18 C4 U B 83 40.346 12.545 -20.703 1.00 68.42 C
ATOM 19 O4 U B 83 39.718 11.753 -21.397 1.00 72.10 O
ATOM 20 C5 U B 83 40.415 13.966 -20.919 1.00 76.24 C
ATOM 21 C6 U B 83 41.140 14.718 -20.083 1.00 78.99 C
ATOM 22 P G B 84 46.841 15.795 -20.516 1.00 95.29 P
ATOM 23 OP1 G B 84 48.133 16.477 -20.279 1.00107.10 O
ATOM 24 OP2 G B 84 45.980 16.200 -21.652 1.00 75.38 O
ATOM 25 O5' G B 84 47.084 14.219 -20.633 1.00 89.97 O
TER

Atoms:
OP1: (36.282,20.694,-22.996)
OP2: (35.773,18.198,-23.273)
C3': (39.329,18.632,-19.838)
C1': (38.453,17.492,-17.994)
C5': (37.204,20.002,-20.218)
O4': (37.580,18.571,-18.285)
C8: (37.082,16.136,-19.642)
O2': (40.550,18.645,-17.716)
C6: (37.430,12.772,-18.672)
C5: (37.385,14.155,-18.938)
C4: (38.102,14.978,-18.089)
P: (35.906,19.390,-22.407)
C4': (38.220,19.470,-19.226)
C2': (39.797,17.855,-18.613)
C2: (38.808,13.275,-16.882)
N1: (38.165,12.360,-17.617)
N3: (38.841,14.599,-17.034)
N6: (36.785,11.860,-19.407)
N7: (36.744,14.898,-19.916)
N9: (37.898,16.259,-18.551)
O5': (36.941,19.044,-21.236)
O3': (40.346,19.460,-20.381)
C4: (40.346,12.545,-20.703)
N3: (41.064,12.088,-19.613)
OP1: (41.949,19.717,-22.280)
OP2: (41.204,17.395,-21.501)
C2: (41.814,12.840,-18.742)
C1': (42.613,15.112,-18.136)
C3': (44.597,15.638,-19.255)
O5': (42.714,18.785,-20.084)
O4': (42.493,16.428,-18.652)
C5': (43.770,17.851,-20.197)
P: (41.559,18.797,-21.187)
C4': (43.814,16.913,-19.005)
C2': (44.105,14.786,-18.097)
O2': (44.669,15.189,-16.864)
N1: (41.833,14.193,-19.012)
O4: (39.718,11.753,-21.397)
O2: (42.410,12.333,-17.808)
C6: (41.140,14.718,-20.083)
C5: (40.415,13.966,-20.919)
O3': (45.980,15.907,-19.177)
Image (generated by PyMOL):
PyMOL image
show in jmol