ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01255:01256

Extra

PDB:
ATOM 1 O3' G A1254 40.244 98.056 73.012 1.00 27.89 O
ATOM 2 P A A1255 39.176 98.304 71.828 1.00 27.82 P
ATOM 3 OP1 A A1255 39.922 98.401 70.556 1.00 27.26 O
ATOM 4 OP2 A A1255 38.253 99.396 72.220 1.00 23.60 O
ATOM 5 O5' A A1255 38.365 96.938 71.750 1.00 29.81 O
ATOM 6 C5' A A1255 38.963 95.751 71.181 1.00 31.56 C
ATOM 7 C4' A A1255 37.948 94.634 71.126 1.00 33.57 C
ATOM 8 O4' A A1255 37.523 94.315 72.476 1.00 33.98 O
ATOM 9 C3' A A1255 36.650 94.970 70.406 1.00 34.32 C
ATOM 10 O3' A A1255 36.757 94.812 68.997 1.00 34.66 O
ATOM 11 C2' A A1255 35.674 93.985 71.024 1.00 32.93 C
ATOM 12 O2' A A1255 35.830 92.685 70.503 1.00 33.46 O
ATOM 13 C1' A A1255 36.141 93.988 72.478 1.00 33.53 C
ATOM 14 N9 A A1255 35.432 94.989 73.270 1.00 31.69 N
ATOM 15 C8 A A1255 35.851 96.241 73.626 1.00 32.13 C
ATOM 16 N7 A A1255 34.965 96.920 74.309 1.00 32.38 N
ATOM 17 C5 A A1255 33.893 96.053 74.415 1.00 31.78 C
ATOM 18 C6 A A1255 32.631 96.184 75.009 1.00 32.89 C
ATOM 19 N6 A A1255 32.216 97.287 75.623 1.00 34.21 N
ATOM 20 N1 A A1255 31.795 95.131 74.942 1.00 34.02 N
ATOM 21 C2 A A1255 32.209 94.025 74.310 1.00 34.74 C
ATOM 22 N3 A A1255 33.367 93.786 73.706 1.00 33.10 N
ATOM 23 C4 A A1255 34.173 94.854 73.793 1.00 31.99 C
ATOM 24 P U A1256 35.831 95.695 68.038 1.00 34.58 P
ATOM 25 OP1 U A1256 36.134 95.346 66.629 1.00 32.79 O
ATOM 26 OP2 U A1256 35.957 97.097 68.491 1.00 33.45 O
ATOM 27 O5' U A1256 34.354 95.211 68.388 1.00 35.97 O
TER

ATOM 1 O3' A B1255 36.757 94.812 68.997 1.00 34.66 O
ATOM 2 P U B1256 35.831 95.695 68.038 1.00 34.58 P
ATOM 3 OP1 U B1256 36.134 95.346 66.629 1.00 32.79 O
ATOM 4 OP2 U B1256 35.957 97.097 68.491 1.00 33.45 O
ATOM 5 O5' U B1256 34.354 95.211 68.388 1.00 35.97 O
ATOM 6 C5' U B1256 33.923 93.861 68.114 1.00 35.49 C
ATOM 7 C4' U B1256 32.484 93.669 68.547 1.00 34.87 C
ATOM 8 O4' U B1256 32.379 93.818 69.987 1.00 34.03 O
ATOM 9 C3' U B1256 31.487 94.684 68.013 1.00 34.78 C
ATOM 10 O3' U B1256 31.068 94.391 66.687 1.00 34.71 O
ATOM 11 C2' U B1256 30.349 94.569 69.013 1.00 34.04 C
ATOM 12 O2' U B1256 29.564 93.420 68.805 1.00 37.00 O
ATOM 13 C1' U B1256 31.120 94.388 70.317 1.00 34.24 C
ATOM 14 N1 U B1256 31.334 95.665 71.012 1.00 35.59 N
ATOM 15 C2 U B1256 30.277 96.183 71.742 1.00 36.44 C
ATOM 16 O2 U B1256 29.197 95.623 71.837 1.00 37.18 O
ATOM 17 N3 U B1256 30.529 97.387 72.352 1.00 35.72 N
ATOM 18 C4 U B1256 31.695 98.115 72.301 1.00 35.33 C
ATOM 19 O4 U B1256 31.734 99.227 72.822 1.00 36.29 O
ATOM 20 C5 U B1256 32.741 97.512 71.542 1.00 35.59 C
ATOM 21 C6 U B1256 32.534 96.337 70.939 1.00 35.91 C
ATOM 22 P U B1257 30.652 95.591 65.704 1.00 36.00 P
ATOM 23 OP1 U B1257 30.546 95.012 64.345 1.00 35.02 O
ATOM 24 OP2 U B1257 31.547 96.748 65.939 1.00 38.45 O
ATOM 25 O5' U B1257 29.215 96.048 66.215 1.00 36.45 O
TER

Atoms:
OP1: (39.922,98.401,70.556)
OP2: (38.253,99.396,72.220)
C3': (36.650,94.970,70.406)
C1': (36.141,93.988,72.478)
C5': (38.963,95.751,71.181)
O4': (37.523,94.315,72.476)
C8: (35.851,96.241,73.626)
O2': (35.830,92.685,70.503)
C6: (32.631,96.184,75.009)
C5: (33.893,96.053,74.415)
C4: (34.173,94.854,73.793)
P: (39.176,98.304,71.828)
C4': (37.948,94.634,71.126)
C2': (35.674,93.985,71.024)
C2: (32.209,94.025,74.310)
N1: (31.795,95.131,74.942)
N3: (33.367,93.786,73.706)
N6: (32.216,97.287,75.623)
N7: (34.965,96.920,74.309)
N9: (35.432,94.989,73.270)
O5': (38.365,96.938,71.750)
O3': (36.757,94.812,68.997)
C4: (31.695,98.115,72.301)
N3: (30.529,97.387,72.352)
OP1: (36.134,95.346,66.629)
OP2: (35.957,97.097,68.491)
C2: (30.277,96.183,71.742)
C1': (31.120,94.388,70.317)
C3': (31.487,94.684,68.013)
O5': (34.354,95.211,68.388)
O4': (32.379,93.818,69.987)
C5': (33.923,93.861,68.114)
P: (35.831,95.695,68.038)
C4': (32.484,93.669,68.547)
C2': (30.349,94.569,69.013)
O2': (29.564,93.420,68.805)
N1: (31.334,95.665,71.012)
O4: (31.734,99.227,72.822)
O2: (29.197,95.623,71.837)
C6: (32.534,96.337,70.939)
C5: (32.741,97.512,71.542)
O3': (31.068,94.391,66.687)
Image (generated by PyMOL):
PyMOL image
show in jmol