Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12066:12067
Extra
PDB:
ATOM 1 O3' U A2065 -29.620 -9.051 51.018 1.00 93.55 O
ATOM 2 P A A2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 3 OP1 A A2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 4 OP2 A A2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 5 O5' A A2066 -28.841 -9.086 53.392 1.00 86.97 O
ATOM 6 C5' A A2066 -27.730 -8.214 53.281 1.00 86.82 C
ATOM 7 C4' A A2066 -27.852 -7.019 54.186 1.00 86.66 C
ATOM 8 O4' A A2066 -29.146 -6.394 54.017 1.00 86.76 O
ATOM 9 C3' A A2066 -27.774 -7.304 55.670 1.00 86.52 C
ATOM 10 O3' A A2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 11 C2' A A2066 -28.501 -6.122 56.289 1.00 86.44 C
ATOM 12 O2' A A2066 -27.661 -4.972 56.306 1.00 86.29 O
ATOM 13 C1' A A2066 -29.622 -5.913 55.272 1.00 86.64 C
ATOM 14 N9 A A2066 -30.837 -6.683 55.634 1.00 86.78 N
ATOM 15 C8 A A2066 -31.270 -7.839 55.028 1.00 86.96 C
ATOM 16 N7 A A2066 -32.360 -8.349 55.530 1.00 87.04 N
ATOM 17 C5 A A2066 -32.674 -7.472 56.548 1.00 86.91 C
ATOM 18 C6 A A2066 -33.741 -7.472 57.455 1.00 86.92 C
ATOM 19 N6 A A2066 -34.685 -8.414 57.451 1.00 87.08 N
ATOM 20 N1 A A2066 -33.799 -6.464 58.352 1.00 86.77 N
ATOM 21 C2 A A2066 -32.827 -5.539 58.318 1.00 86.62 C
ATOM 22 N3 A A2066 -31.762 -5.436 57.516 1.00 86.59 N
ATOM 23 C4 A A2066 -31.747 -6.446 56.635 1.00 86.75 C
ATOM 24 P U A2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 25 OP1 U A2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 26 OP2 U A2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 27 O5' U A2067 -26.557 -8.443 58.397 1.00 80.02 O
TER
ATOM 1 O3' A B2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 2 P U B2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 3 OP1 U B2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 4 OP2 U B2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 5 O5' U B2067 -26.557 -8.443 58.397 1.00 80.02 O
ATOM 6 C5' U B2067 -26.289 -7.192 59.016 1.00 79.85 C
ATOM 7 C4' U B2067 -27.241 -6.924 60.154 1.00 79.81 C
ATOM 8 O4' U B2067 -28.573 -6.698 59.636 1.00 79.98 O
ATOM 9 C3' U B2067 -27.414 -8.057 61.145 1.00 79.80 C
ATOM 10 O3' U B2067 -26.402 -8.080 62.119 1.00 79.61 O
ATOM 11 C2' U B2067 -28.788 -7.807 61.726 1.00 79.86 C
ATOM 12 O2' U B2067 -28.713 -6.818 62.736 1.00 79.68 O
ATOM 13 C1' U B2067 -29.530 -7.222 60.527 1.00 80.01 C
ATOM 14 N1 U B2067 -30.331 -8.232 59.811 1.00 80.23 N
ATOM 15 C2 U B2067 -31.503 -8.690 60.386 1.00 80.32 C
ATOM 16 O2 U B2067 -31.874 -8.310 61.476 1.00 80.21 O
ATOM 17 N3 U B2067 -32.215 -9.614 59.649 1.00 80.52 N
ATOM 18 C4 U B2067 -31.862 -10.086 58.405 1.00 80.65 C
ATOM 19 O4 U B2067 -32.561 -10.907 57.835 1.00 80.83 O
ATOM 20 C5 U B2067 -30.654 -9.548 57.879 1.00 80.55 C
ATOM 21 C6 U B2067 -29.942 -8.657 58.570 1.00 80.35 C
ATOM 22 P G B2068 -25.966 -9.475 62.755 1.00 63.23 P
ATOM 23 OP1 G B2068 -24.981 -9.179 63.821 1.00 63.01 O
ATOM 24 OP2 G B2068 -25.565 -10.373 61.624 1.00 63.37 O
ATOM 25 O5' G B2068 -27.326 -10.000 63.398 1.00 63.33 O
TER
ATOM 2 P A A2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 3 OP1 A A2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 4 OP2 A A2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 5 O5' A A2066 -28.841 -9.086 53.392 1.00 86.97 O
ATOM 6 C5' A A2066 -27.730 -8.214 53.281 1.00 86.82 C
ATOM 7 C4' A A2066 -27.852 -7.019 54.186 1.00 86.66 C
ATOM 8 O4' A A2066 -29.146 -6.394 54.017 1.00 86.76 O
ATOM 9 C3' A A2066 -27.774 -7.304 55.670 1.00 86.52 C
ATOM 10 O3' A A2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 11 C2' A A2066 -28.501 -6.122 56.289 1.00 86.44 C
ATOM 12 O2' A A2066 -27.661 -4.972 56.306 1.00 86.29 O
ATOM 13 C1' A A2066 -29.622 -5.913 55.272 1.00 86.64 C
ATOM 14 N9 A A2066 -30.837 -6.683 55.634 1.00 86.78 N
ATOM 15 C8 A A2066 -31.270 -7.839 55.028 1.00 86.96 C
ATOM 16 N7 A A2066 -32.360 -8.349 55.530 1.00 87.04 N
ATOM 17 C5 A A2066 -32.674 -7.472 56.548 1.00 86.91 C
ATOM 18 C6 A A2066 -33.741 -7.472 57.455 1.00 86.92 C
ATOM 19 N6 A A2066 -34.685 -8.414 57.451 1.00 87.08 N
ATOM 20 N1 A A2066 -33.799 -6.464 58.352 1.00 86.77 N
ATOM 21 C2 A A2066 -32.827 -5.539 58.318 1.00 86.62 C
ATOM 22 N3 A A2066 -31.762 -5.436 57.516 1.00 86.59 N
ATOM 23 C4 A A2066 -31.747 -6.446 56.635 1.00 86.75 C
ATOM 24 P U A2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 25 OP1 U A2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 26 OP2 U A2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 27 O5' U A2067 -26.557 -8.443 58.397 1.00 80.02 O
TER
ATOM 1 O3' A B2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 2 P U B2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 3 OP1 U B2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 4 OP2 U B2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 5 O5' U B2067 -26.557 -8.443 58.397 1.00 80.02 O
ATOM 6 C5' U B2067 -26.289 -7.192 59.016 1.00 79.85 C
ATOM 7 C4' U B2067 -27.241 -6.924 60.154 1.00 79.81 C
ATOM 8 O4' U B2067 -28.573 -6.698 59.636 1.00 79.98 O
ATOM 9 C3' U B2067 -27.414 -8.057 61.145 1.00 79.80 C
ATOM 10 O3' U B2067 -26.402 -8.080 62.119 1.00 79.61 O
ATOM 11 C2' U B2067 -28.788 -7.807 61.726 1.00 79.86 C
ATOM 12 O2' U B2067 -28.713 -6.818 62.736 1.00 79.68 O
ATOM 13 C1' U B2067 -29.530 -7.222 60.527 1.00 80.01 C
ATOM 14 N1 U B2067 -30.331 -8.232 59.811 1.00 80.23 N
ATOM 15 C2 U B2067 -31.503 -8.690 60.386 1.00 80.32 C
ATOM 16 O2 U B2067 -31.874 -8.310 61.476 1.00 80.21 O
ATOM 17 N3 U B2067 -32.215 -9.614 59.649 1.00 80.52 N
ATOM 18 C4 U B2067 -31.862 -10.086 58.405 1.00 80.65 C
ATOM 19 O4 U B2067 -32.561 -10.907 57.835 1.00 80.83 O
ATOM 20 C5 U B2067 -30.654 -9.548 57.879 1.00 80.55 C
ATOM 21 C6 U B2067 -29.942 -8.657 58.570 1.00 80.35 C
ATOM 22 P G B2068 -25.966 -9.475 62.755 1.00 63.23 P
ATOM 23 OP1 G B2068 -24.981 -9.179 63.821 1.00 63.01 O
ATOM 24 OP2 G B2068 -25.565 -10.373 61.624 1.00 63.37 O
ATOM 25 O5' G B2068 -27.326 -10.000 63.398 1.00 63.33 O
TER
Atoms:
OP1: (-27.994,-10.796,51.732)
OP2: (-30.421,-10.855,52.516)
C3': (-27.774,-7.304,55.670)
C1': (-29.622,-5.913,55.272)
C5': (-27.730,-8.214,53.281)
O4': (-29.146,-6.394,54.017)
C8: (-31.270,-7.839,55.028)
O2': (-27.661,-4.972,56.306)
C6: (-33.741,-7.472,57.455)
C5: (-32.674,-7.472,56.548)
C4: (-31.747,-6.446,56.635)
P: (-29.212,-10.069,52.188)
C4': (-27.852,-7.019,54.186)
C2': (-28.501,-6.122,56.289)
C2: (-32.827,-5.539,58.318)
N1: (-33.799,-6.464,58.352)
N3: (-31.762,-5.436,57.516)
N6: (-34.685,-8.414,57.451)
N7: (-32.360,-8.349,55.530)
N9: (-30.837,-6.683,55.634)
O5': (-28.841,-9.086,53.392)
O3': (-26.461,-7.437,56.120)
OP2: (-30.421,-10.855,52.516)
C3': (-27.774,-7.304,55.670)
C1': (-29.622,-5.913,55.272)
C5': (-27.730,-8.214,53.281)
O4': (-29.146,-6.394,54.017)
C8: (-31.270,-7.839,55.028)
O2': (-27.661,-4.972,56.306)
C6: (-33.741,-7.472,57.455)
C5: (-32.674,-7.472,56.548)
C4: (-31.747,-6.446,56.635)
P: (-29.212,-10.069,52.188)
C4': (-27.852,-7.019,54.186)
C2': (-28.501,-6.122,56.289)
C2: (-32.827,-5.539,58.318)
N1: (-33.799,-6.464,58.352)
N3: (-31.762,-5.436,57.516)
N6: (-34.685,-8.414,57.451)
N7: (-32.360,-8.349,55.530)
N9: (-30.837,-6.683,55.634)
O5': (-28.841,-9.086,53.392)
O3': (-26.461,-7.437,56.120)
C4: (-31.862,-10.086,58.405)
N3: (-32.215,-9.614,59.649)
OP1: (-24.568,-8.823,56.880)
OP2: (-26.845,-9.863,56.335)
C2: (-31.503,-8.690,60.386)
C1': (-29.530,-7.222,60.527)
C3': (-27.414,-8.057,61.145)
O5': (-26.557,-8.443,58.397)
O4': (-28.573,-6.698,59.636)
C5': (-26.289,-7.192,59.016)
P: (-26.052,-8.751,56.915)
C4': (-27.241,-6.924,60.154)
C2': (-28.788,-7.807,61.726)
O2': (-28.713,-6.818,62.736)
N1: (-30.331,-8.232,59.811)
O4: (-32.561,-10.907,57.835)
O2: (-31.874,-8.310,61.476)
C6: (-29.942,-8.657,58.570)
C5: (-30.654,-9.548,57.879)
O3': (-26.402,-8.080,62.119)
N3: (-32.215,-9.614,59.649)
OP1: (-24.568,-8.823,56.880)
OP2: (-26.845,-9.863,56.335)
C2: (-31.503,-8.690,60.386)
C1': (-29.530,-7.222,60.527)
C3': (-27.414,-8.057,61.145)
O5': (-26.557,-8.443,58.397)
O4': (-28.573,-6.698,59.636)
C5': (-26.289,-7.192,59.016)
P: (-26.052,-8.751,56.915)
C4': (-27.241,-6.924,60.154)
C2': (-28.788,-7.807,61.726)
O2': (-28.713,-6.818,62.736)
N1: (-30.331,-8.232,59.811)
O4: (-32.561,-10.907,57.835)
O2: (-31.874,-8.310,61.476)
C6: (-29.942,-8.657,58.570)
C5: (-30.654,-9.548,57.879)
O3': (-26.402,-8.080,62.119)
Image (generated by PyMOL):