Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01284:01285
Extra
PDB:
ATOM 1 O3' G A1283 6.265 125.008 79.538 1.00 42.48 O
ATOM 2 P G A1284 6.831 123.541 79.897 1.00 43.20 P
ATOM 3 OP1 G A1284 5.927 123.014 80.942 1.00 45.46 O
ATOM 4 OP2 G A1284 8.285 123.622 80.169 1.00 45.15 O
ATOM 5 O5' G A1284 6.659 122.687 78.559 1.00 40.96 O
ATOM 6 C5' G A1284 5.371 122.208 78.147 1.00 38.91 C
ATOM 7 C4' G A1284 5.489 121.335 76.914 1.00 39.01 C
ATOM 8 O4' G A1284 6.056 122.087 75.805 1.00 38.56 O
ATOM 9 C3' G A1284 6.385 120.113 76.996 1.00 37.66 C
ATOM 10 O3' G A1284 5.769 119.038 77.681 1.00 38.87 O
ATOM 11 C2' G A1284 6.597 119.804 75.520 1.00 38.42 C
ATOM 12 O2' G A1284 5.467 119.243 74.885 1.00 36.84 O
ATOM 13 C1' G A1284 6.794 121.210 74.961 1.00 38.85 C
ATOM 14 N9 G A1284 8.209 121.572 75.023 1.00 40.37 N
ATOM 15 C8 G A1284 8.809 122.435 75.908 1.00 40.91 C
ATOM 16 N7 G A1284 10.099 122.528 75.736 1.00 42.17 N
ATOM 17 C5 G A1284 10.367 121.680 74.670 1.00 41.05 C
ATOM 18 C6 G A1284 11.592 121.368 74.037 1.00 41.03 C
ATOM 19 O6 G A1284 12.717 121.793 74.296 1.00 42.44 O
ATOM 20 N1 G A1284 11.416 120.458 73.001 1.00 41.41 N
ATOM 21 C2 G A1284 10.214 119.920 72.619 1.00 39.57 C
ATOM 22 N2 G A1284 10.249 119.056 71.593 1.00 37.43 N
ATOM 23 N3 G A1284 9.062 120.208 73.201 1.00 39.72 N
ATOM 24 C4 G A1284 9.212 121.088 74.213 1.00 39.50 C
ATOM 25 P C A1285 6.673 117.841 78.263 1.00 39.61 P
ATOM 26 OP1 C A1285 5.752 116.893 78.946 1.00 40.36 O
ATOM 27 OP2 C A1285 7.805 118.434 79.017 1.00 38.95 O
ATOM 28 O5' C A1285 7.255 117.107 76.976 1.00 34.13 O
TER
ATOM 1 O3' G B1284 5.769 119.038 77.681 1.00 38.87 O
ATOM 2 P C B1285 6.673 117.841 78.263 1.00 39.61 P
ATOM 3 OP1 C B1285 5.752 116.893 78.946 1.00 40.36 O
ATOM 4 OP2 C B1285 7.805 118.434 79.017 1.00 38.95 O
ATOM 5 O5' C B1285 7.255 117.107 76.976 1.00 34.13 O
ATOM 6 C5' C B1285 6.397 116.408 76.076 1.00 30.39 C
ATOM 7 C4' C B1285 7.205 115.826 74.950 1.00 33.08 C
ATOM 8 O4' C B1285 7.953 116.888 74.302 1.00 34.89 O
ATOM 9 C3' C B1285 8.271 114.831 75.363 1.00 33.70 C
ATOM 10 O3' C B1285 7.725 113.532 75.537 1.00 34.90 O
ATOM 11 C2' C B1285 9.253 114.905 74.201 1.00 33.73 C
ATOM 12 O2' C B1285 8.839 114.192 73.058 1.00 33.33 O
ATOM 13 C1' C B1285 9.216 116.397 73.878 1.00 34.25 C
ATOM 14 N1 C B1285 10.281 117.166 74.558 1.00 36.06 N
ATOM 15 C2 C B1285 11.581 117.141 74.027 1.00 36.15 C
ATOM 16 O2 C B1285 11.804 116.478 73.007 1.00 37.83 O
ATOM 17 N3 C B1285 12.557 117.836 74.643 1.00 36.69 N
ATOM 18 C4 C B1285 12.285 118.528 75.752 1.00 37.69 C
ATOM 19 N4 C B1285 13.286 119.186 76.340 1.00 39.04 N
ATOM 20 C5 C B1285 10.976 118.576 76.310 1.00 36.86 C
ATOM 21 C6 C B1285 10.015 117.889 75.688 1.00 35.80 C
ATOM 22 P G B1286 8.342 112.556 76.650 1.00 38.33 P
ATOM 23 OP1 G B1286 7.552 111.292 76.608 1.00 38.44 O
ATOM 24 OP2 G B1286 8.468 113.310 77.926 1.00 33.87 O
ATOM 25 O5' G B1286 9.803 112.230 76.105 1.00 36.60 O
TER
ATOM 2 P G A1284 6.831 123.541 79.897 1.00 43.20 P
ATOM 3 OP1 G A1284 5.927 123.014 80.942 1.00 45.46 O
ATOM 4 OP2 G A1284 8.285 123.622 80.169 1.00 45.15 O
ATOM 5 O5' G A1284 6.659 122.687 78.559 1.00 40.96 O
ATOM 6 C5' G A1284 5.371 122.208 78.147 1.00 38.91 C
ATOM 7 C4' G A1284 5.489 121.335 76.914 1.00 39.01 C
ATOM 8 O4' G A1284 6.056 122.087 75.805 1.00 38.56 O
ATOM 9 C3' G A1284 6.385 120.113 76.996 1.00 37.66 C
ATOM 10 O3' G A1284 5.769 119.038 77.681 1.00 38.87 O
ATOM 11 C2' G A1284 6.597 119.804 75.520 1.00 38.42 C
ATOM 12 O2' G A1284 5.467 119.243 74.885 1.00 36.84 O
ATOM 13 C1' G A1284 6.794 121.210 74.961 1.00 38.85 C
ATOM 14 N9 G A1284 8.209 121.572 75.023 1.00 40.37 N
ATOM 15 C8 G A1284 8.809 122.435 75.908 1.00 40.91 C
ATOM 16 N7 G A1284 10.099 122.528 75.736 1.00 42.17 N
ATOM 17 C5 G A1284 10.367 121.680 74.670 1.00 41.05 C
ATOM 18 C6 G A1284 11.592 121.368 74.037 1.00 41.03 C
ATOM 19 O6 G A1284 12.717 121.793 74.296 1.00 42.44 O
ATOM 20 N1 G A1284 11.416 120.458 73.001 1.00 41.41 N
ATOM 21 C2 G A1284 10.214 119.920 72.619 1.00 39.57 C
ATOM 22 N2 G A1284 10.249 119.056 71.593 1.00 37.43 N
ATOM 23 N3 G A1284 9.062 120.208 73.201 1.00 39.72 N
ATOM 24 C4 G A1284 9.212 121.088 74.213 1.00 39.50 C
ATOM 25 P C A1285 6.673 117.841 78.263 1.00 39.61 P
ATOM 26 OP1 C A1285 5.752 116.893 78.946 1.00 40.36 O
ATOM 27 OP2 C A1285 7.805 118.434 79.017 1.00 38.95 O
ATOM 28 O5' C A1285 7.255 117.107 76.976 1.00 34.13 O
TER
ATOM 1 O3' G B1284 5.769 119.038 77.681 1.00 38.87 O
ATOM 2 P C B1285 6.673 117.841 78.263 1.00 39.61 P
ATOM 3 OP1 C B1285 5.752 116.893 78.946 1.00 40.36 O
ATOM 4 OP2 C B1285 7.805 118.434 79.017 1.00 38.95 O
ATOM 5 O5' C B1285 7.255 117.107 76.976 1.00 34.13 O
ATOM 6 C5' C B1285 6.397 116.408 76.076 1.00 30.39 C
ATOM 7 C4' C B1285 7.205 115.826 74.950 1.00 33.08 C
ATOM 8 O4' C B1285 7.953 116.888 74.302 1.00 34.89 O
ATOM 9 C3' C B1285 8.271 114.831 75.363 1.00 33.70 C
ATOM 10 O3' C B1285 7.725 113.532 75.537 1.00 34.90 O
ATOM 11 C2' C B1285 9.253 114.905 74.201 1.00 33.73 C
ATOM 12 O2' C B1285 8.839 114.192 73.058 1.00 33.33 O
ATOM 13 C1' C B1285 9.216 116.397 73.878 1.00 34.25 C
ATOM 14 N1 C B1285 10.281 117.166 74.558 1.00 36.06 N
ATOM 15 C2 C B1285 11.581 117.141 74.027 1.00 36.15 C
ATOM 16 O2 C B1285 11.804 116.478 73.007 1.00 37.83 O
ATOM 17 N3 C B1285 12.557 117.836 74.643 1.00 36.69 N
ATOM 18 C4 C B1285 12.285 118.528 75.752 1.00 37.69 C
ATOM 19 N4 C B1285 13.286 119.186 76.340 1.00 39.04 N
ATOM 20 C5 C B1285 10.976 118.576 76.310 1.00 36.86 C
ATOM 21 C6 C B1285 10.015 117.889 75.688 1.00 35.80 C
ATOM 22 P G B1286 8.342 112.556 76.650 1.00 38.33 P
ATOM 23 OP1 G B1286 7.552 111.292 76.608 1.00 38.44 O
ATOM 24 OP2 G B1286 8.468 113.310 77.926 1.00 33.87 O
ATOM 25 O5' G B1286 9.803 112.230 76.105 1.00 36.60 O
TER
Atoms:
OP1: (5.927,123.014,80.942)
OP2: (8.285,123.622,80.169)
C3': (6.385,120.113,76.996)
C1': (6.794,121.210,74.961)
C5': (5.371,122.208,78.147)
O6: (12.717,121.793,74.296)
O4': (6.056,122.087,75.805)
C8: (8.809,122.435,75.908)
C2: (10.214,119.920,72.619)
C6: (11.592,121.368,74.037)
C5: (10.367,121.680,74.670)
C4: (9.212,121.088,74.213)
P: (6.831,123.541,79.897)
C4': (5.489,121.335,76.914)
C2': (6.597,119.804,75.520)
O2': (5.467,119.243,74.885)
N1: (11.416,120.458,73.001)
N2: (10.249,119.056,71.593)
N3: (9.062,120.208,73.201)
N7: (10.099,122.528,75.736)
N9: (8.209,121.572,75.023)
O5': (6.659,122.687,78.559)
O3': (5.769,119.038,77.681)
OP2: (8.285,123.622,80.169)
C3': (6.385,120.113,76.996)
C1': (6.794,121.210,74.961)
C5': (5.371,122.208,78.147)
O6: (12.717,121.793,74.296)
O4': (6.056,122.087,75.805)
C8: (8.809,122.435,75.908)
C2: (10.214,119.920,72.619)
C6: (11.592,121.368,74.037)
C5: (10.367,121.680,74.670)
C4: (9.212,121.088,74.213)
P: (6.831,123.541,79.897)
C4': (5.489,121.335,76.914)
C2': (6.597,119.804,75.520)
O2': (5.467,119.243,74.885)
N1: (11.416,120.458,73.001)
N2: (10.249,119.056,71.593)
N3: (9.062,120.208,73.201)
N7: (10.099,122.528,75.736)
N9: (8.209,121.572,75.023)
O5': (6.659,122.687,78.559)
O3': (5.769,119.038,77.681)
C2: (11.581,117.141,74.027)
OP1: (5.752,116.893,78.946)
OP2: (7.805,118.434,79.017)
C4: (12.285,118.528,75.752)
O5': (7.255,117.107,76.976)
C3': (8.271,114.831,75.363)
C1': (9.216,116.397,73.878)
O4': (7.953,116.888,74.302)
C5': (6.397,116.408,76.076)
P: (6.673,117.841,78.263)
O2: (11.804,116.478,73.007)
C4': (7.205,115.826,74.950)
C2': (9.253,114.905,74.201)
O2': (8.839,114.192,73.058)
N1: (10.281,117.166,74.558)
N3: (12.557,117.836,74.643)
N4: (13.286,119.186,76.340)
C6: (10.015,117.889,75.688)
C5: (10.976,118.576,76.310)
O3': (7.725,113.532,75.537)
OP1: (5.752,116.893,78.946)
OP2: (7.805,118.434,79.017)
C4: (12.285,118.528,75.752)
O5': (7.255,117.107,76.976)
C3': (8.271,114.831,75.363)
C1': (9.216,116.397,73.878)
O4': (7.953,116.888,74.302)
C5': (6.397,116.408,76.076)
P: (6.673,117.841,78.263)
O2: (11.804,116.478,73.007)
C4': (7.205,115.826,74.950)
C2': (9.253,114.905,74.201)
O2': (8.839,114.192,73.058)
N1: (10.281,117.166,74.558)
N3: (12.557,117.836,74.643)
N4: (13.286,119.186,76.340)
C6: (10.015,117.889,75.688)
C5: (10.976,118.576,76.310)
O3': (7.725,113.532,75.537)
Image (generated by PyMOL):