Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2111:2112
Extra
PDB:
ATOM 1 O3' U A 110 -64.668 68.413 88.633 1.00 79.69 O
ATOM 2 P A A 111 -64.429 69.991 88.446 1.00 74.23 P
ATOM 3 OP1 A A 111 -65.018 70.655 89.615 1.00 74.91 O
ATOM 4 OP2 A A 111 -64.905 70.360 87.101 1.00 74.60 O
ATOM 5 O5' A A 111 -62.861 70.115 88.498 1.00 73.46 O
ATOM 6 C5' A A 111 -62.170 69.883 89.703 1.00 73.08 C
ATOM 7 C4' A A 111 -60.731 70.233 89.551 1.00 72.51 C
ATOM 8 O4' A A 111 -60.100 69.279 88.676 1.00 71.73 O
ATOM 9 C3' A A 111 -60.458 71.566 88.890 1.00 72.92 C
ATOM 10 O3' A A 111 -60.589 72.644 89.788 1.00 73.53 O
ATOM 11 C2' A A 111 -59.052 71.386 88.346 1.00 72.13 C
ATOM 12 O2' A A 111 -58.111 71.535 89.383 1.00 71.83 O
ATOM 13 C1' A A 111 -59.068 69.915 87.951 1.00 71.47 C
ATOM 14 N9 A A 111 -59.297 69.698 86.512 1.00 71.43 N
ATOM 15 C8 A A 111 -60.441 69.327 85.841 1.00 71.80 C
ATOM 16 N7 A A 111 -60.245 69.168 84.550 1.00 71.63 N
ATOM 17 C5 A A 111 -58.881 69.433 84.376 1.00 71.08 C
ATOM 18 C6 A A 111 -58.004 69.416 83.262 1.00 70.67 C
ATOM 19 N6 A A 111 -58.372 69.130 82.014 1.00 70.74 N
ATOM 20 N1 A A 111 -56.699 69.706 83.474 1.00 70.20 N
ATOM 21 C2 A A 111 -56.307 69.994 84.717 1.00 70.15 C
ATOM 22 N3 A A 111 -57.019 70.034 85.840 1.00 70.50 N
ATOM 23 C4 A A 111 -58.298 69.740 85.591 1.00 70.95 C
ATOM 24 P U A 112 -60.916 74.101 89.235 1.00 69.43 P
ATOM 25 OP1 U A 112 -61.183 74.980 90.410 1.00 70.08 O
ATOM 26 OP2 U A 112 -61.948 73.943 88.201 1.00 69.82 O
ATOM 27 O5' U A 112 -59.556 74.508 88.571 1.00 68.93 O
TER
ATOM 1 O3' A B 111 -60.589 72.644 89.788 1.00 73.53 O
ATOM 2 P U B 112 -60.916 74.101 89.235 1.00 69.43 P
ATOM 3 OP1 U B 112 -61.183 74.980 90.410 1.00 70.08 O
ATOM 4 OP2 U B 112 -61.948 73.943 88.201 1.00 69.82 O
ATOM 5 O5' U B 112 -59.556 74.508 88.571 1.00 68.93 O
ATOM 6 C5' U B 112 -58.397 74.618 89.362 1.00 68.48 C
ATOM 7 C4' U B 112 -57.243 75.033 88.528 1.00 68.10 C
ATOM 8 O4' U B 112 -57.021 74.049 87.519 1.00 67.47 O
ATOM 9 C3' U B 112 -57.424 76.339 87.775 1.00 68.79 C
ATOM 10 O3' U B 112 -56.963 77.419 88.552 1.00 69.17 O
ATOM 11 C2' U B 112 -56.617 76.152 86.490 1.00 68.28 C
ATOM 12 O2' U B 112 -55.357 76.801 86.604 1.00 68.05 O
ATOM 13 C1' U B 112 -56.386 74.630 86.431 1.00 67.43 C
ATOM 14 N1 U B 112 -56.898 74.006 85.209 1.00 67.33 N
ATOM 15 C2 U B 112 -55.978 73.925 84.207 1.00 66.87 C
ATOM 16 O2 U B 112 -54.882 74.399 84.362 1.00 66.62 O
ATOM 17 N3 U B 112 -56.414 73.322 83.063 1.00 66.78 N
ATOM 18 C4 U B 112 -57.679 72.803 82.872 1.00 67.12 C
ATOM 19 O4 U B 112 -57.951 72.311 81.795 1.00 67.05 O
ATOM 20 C5 U B 112 -58.578 72.896 83.976 1.00 67.57 C
ATOM 21 C6 U B 112 -58.166 73.486 85.103 1.00 67.66 C
ATOM 22 P C B 113 -57.678 78.853 88.539 1.00 73.60 P
ATOM 23 OP1 C B 113 -58.870 78.767 89.403 1.00 74.17 O
ATOM 24 OP2 C B 113 -57.853 79.268 87.127 1.00 73.84 O
ATOM 25 O5' C B 113 -56.571 79.738 89.232 1.00 73.62 O
TER
ATOM 2 P A A 111 -64.429 69.991 88.446 1.00 74.23 P
ATOM 3 OP1 A A 111 -65.018 70.655 89.615 1.00 74.91 O
ATOM 4 OP2 A A 111 -64.905 70.360 87.101 1.00 74.60 O
ATOM 5 O5' A A 111 -62.861 70.115 88.498 1.00 73.46 O
ATOM 6 C5' A A 111 -62.170 69.883 89.703 1.00 73.08 C
ATOM 7 C4' A A 111 -60.731 70.233 89.551 1.00 72.51 C
ATOM 8 O4' A A 111 -60.100 69.279 88.676 1.00 71.73 O
ATOM 9 C3' A A 111 -60.458 71.566 88.890 1.00 72.92 C
ATOM 10 O3' A A 111 -60.589 72.644 89.788 1.00 73.53 O
ATOM 11 C2' A A 111 -59.052 71.386 88.346 1.00 72.13 C
ATOM 12 O2' A A 111 -58.111 71.535 89.383 1.00 71.83 O
ATOM 13 C1' A A 111 -59.068 69.915 87.951 1.00 71.47 C
ATOM 14 N9 A A 111 -59.297 69.698 86.512 1.00 71.43 N
ATOM 15 C8 A A 111 -60.441 69.327 85.841 1.00 71.80 C
ATOM 16 N7 A A 111 -60.245 69.168 84.550 1.00 71.63 N
ATOM 17 C5 A A 111 -58.881 69.433 84.376 1.00 71.08 C
ATOM 18 C6 A A 111 -58.004 69.416 83.262 1.00 70.67 C
ATOM 19 N6 A A 111 -58.372 69.130 82.014 1.00 70.74 N
ATOM 20 N1 A A 111 -56.699 69.706 83.474 1.00 70.20 N
ATOM 21 C2 A A 111 -56.307 69.994 84.717 1.00 70.15 C
ATOM 22 N3 A A 111 -57.019 70.034 85.840 1.00 70.50 N
ATOM 23 C4 A A 111 -58.298 69.740 85.591 1.00 70.95 C
ATOM 24 P U A 112 -60.916 74.101 89.235 1.00 69.43 P
ATOM 25 OP1 U A 112 -61.183 74.980 90.410 1.00 70.08 O
ATOM 26 OP2 U A 112 -61.948 73.943 88.201 1.00 69.82 O
ATOM 27 O5' U A 112 -59.556 74.508 88.571 1.00 68.93 O
TER
ATOM 1 O3' A B 111 -60.589 72.644 89.788 1.00 73.53 O
ATOM 2 P U B 112 -60.916 74.101 89.235 1.00 69.43 P
ATOM 3 OP1 U B 112 -61.183 74.980 90.410 1.00 70.08 O
ATOM 4 OP2 U B 112 -61.948 73.943 88.201 1.00 69.82 O
ATOM 5 O5' U B 112 -59.556 74.508 88.571 1.00 68.93 O
ATOM 6 C5' U B 112 -58.397 74.618 89.362 1.00 68.48 C
ATOM 7 C4' U B 112 -57.243 75.033 88.528 1.00 68.10 C
ATOM 8 O4' U B 112 -57.021 74.049 87.519 1.00 67.47 O
ATOM 9 C3' U B 112 -57.424 76.339 87.775 1.00 68.79 C
ATOM 10 O3' U B 112 -56.963 77.419 88.552 1.00 69.17 O
ATOM 11 C2' U B 112 -56.617 76.152 86.490 1.00 68.28 C
ATOM 12 O2' U B 112 -55.357 76.801 86.604 1.00 68.05 O
ATOM 13 C1' U B 112 -56.386 74.630 86.431 1.00 67.43 C
ATOM 14 N1 U B 112 -56.898 74.006 85.209 1.00 67.33 N
ATOM 15 C2 U B 112 -55.978 73.925 84.207 1.00 66.87 C
ATOM 16 O2 U B 112 -54.882 74.399 84.362 1.00 66.62 O
ATOM 17 N3 U B 112 -56.414 73.322 83.063 1.00 66.78 N
ATOM 18 C4 U B 112 -57.679 72.803 82.872 1.00 67.12 C
ATOM 19 O4 U B 112 -57.951 72.311 81.795 1.00 67.05 O
ATOM 20 C5 U B 112 -58.578 72.896 83.976 1.00 67.57 C
ATOM 21 C6 U B 112 -58.166 73.486 85.103 1.00 67.66 C
ATOM 22 P C B 113 -57.678 78.853 88.539 1.00 73.60 P
ATOM 23 OP1 C B 113 -58.870 78.767 89.403 1.00 74.17 O
ATOM 24 OP2 C B 113 -57.853 79.268 87.127 1.00 73.84 O
ATOM 25 O5' C B 113 -56.571 79.738 89.232 1.00 73.62 O
TER
Atoms:
OP1: (-65.018,70.655,89.615)
OP2: (-64.905,70.360,87.101)
C3': (-60.458,71.566,88.890)
C1': (-59.068,69.915,87.951)
C5': (-62.170,69.883,89.703)
O4': (-60.100,69.279,88.676)
C8: (-60.441,69.327,85.841)
O2': (-58.111,71.535,89.383)
C6: (-58.004,69.416,83.262)
C5: (-58.881,69.433,84.376)
C4: (-58.298,69.740,85.591)
P: (-64.429,69.991,88.446)
C4': (-60.731,70.233,89.551)
C2': (-59.052,71.386,88.346)
C2: (-56.307,69.994,84.717)
N1: (-56.699,69.706,83.474)
N3: (-57.019,70.034,85.840)
N6: (-58.372,69.130,82.014)
N7: (-60.245,69.168,84.550)
N9: (-59.297,69.698,86.512)
O5': (-62.861,70.115,88.498)
O3': (-60.589,72.644,89.788)
OP2: (-64.905,70.360,87.101)
C3': (-60.458,71.566,88.890)
C1': (-59.068,69.915,87.951)
C5': (-62.170,69.883,89.703)
O4': (-60.100,69.279,88.676)
C8: (-60.441,69.327,85.841)
O2': (-58.111,71.535,89.383)
C6: (-58.004,69.416,83.262)
C5: (-58.881,69.433,84.376)
C4: (-58.298,69.740,85.591)
P: (-64.429,69.991,88.446)
C4': (-60.731,70.233,89.551)
C2': (-59.052,71.386,88.346)
C2: (-56.307,69.994,84.717)
N1: (-56.699,69.706,83.474)
N3: (-57.019,70.034,85.840)
N6: (-58.372,69.130,82.014)
N7: (-60.245,69.168,84.550)
N9: (-59.297,69.698,86.512)
O5': (-62.861,70.115,88.498)
O3': (-60.589,72.644,89.788)
C4: (-57.679,72.803,82.872)
N3: (-56.414,73.322,83.063)
OP1: (-61.183,74.980,90.410)
OP2: (-61.948,73.943,88.201)
C2: (-55.978,73.925,84.207)
C1': (-56.386,74.630,86.431)
C3': (-57.424,76.339,87.775)
O5': (-59.556,74.508,88.571)
O4': (-57.021,74.049,87.519)
C5': (-58.397,74.618,89.362)
P: (-60.916,74.101,89.235)
C4': (-57.243,75.033,88.528)
C2': (-56.617,76.152,86.490)
O2': (-55.357,76.801,86.604)
N1: (-56.898,74.006,85.209)
O4: (-57.951,72.311,81.795)
O2: (-54.882,74.399,84.362)
C6: (-58.166,73.486,85.103)
C5: (-58.578,72.896,83.976)
O3': (-56.963,77.419,88.552)
N3: (-56.414,73.322,83.063)
OP1: (-61.183,74.980,90.410)
OP2: (-61.948,73.943,88.201)
C2: (-55.978,73.925,84.207)
C1': (-56.386,74.630,86.431)
C3': (-57.424,76.339,87.775)
O5': (-59.556,74.508,88.571)
O4': (-57.021,74.049,87.519)
C5': (-58.397,74.618,89.362)
P: (-60.916,74.101,89.235)
C4': (-57.243,75.033,88.528)
C2': (-56.617,76.152,86.490)
O2': (-55.357,76.801,86.604)
N1: (-56.898,74.006,85.209)
O4: (-57.951,72.311,81.795)
O2: (-54.882,74.399,84.362)
C6: (-58.166,73.486,85.103)
C5: (-58.578,72.896,83.976)
O3': (-56.963,77.419,88.552)
Image (generated by PyMOL):