Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1947:A1948
Extra
PDB:
ATOM 1 O3' G A1946 110.955 129.315 116.452 1.00 54.52 O
ATOM 2 P G A1947 111.393 127.933 115.758 1.00 57.26 P
ATOM 3 OP1 G A1947 112.770 128.098 115.235 1.00 58.21 O
ATOM 4 OP2 G A1947 110.297 127.548 114.821 1.00 57.65 O
ATOM 5 O5' G A1947 111.470 126.867 116.952 1.00 57.08 O
ATOM 6 C5' G A1947 112.418 127.028 118.030 1.00 56.76 C
ATOM 7 C4' G A1947 112.275 125.935 119.068 1.00 57.71 C
ATOM 8 O4' G A1947 111.043 126.110 119.815 1.00 58.08 O
ATOM 9 C3' G A1947 112.268 124.483 118.630 1.00 58.22 C
ATOM 10 O3' G A1947 113.568 123.954 118.340 1.00 59.24 O
ATOM 11 C2' G A1947 111.612 123.806 119.832 1.00 58.84 C
ATOM 12 O2' G A1947 112.528 123.556 120.878 1.00 56.93 O
ATOM 13 C1' G A1947 110.587 124.856 120.288 1.00 59.54 C
ATOM 14 N9 G A1947 109.228 124.630 119.779 1.00 61.52 N
ATOM 15 C8 G A1947 108.646 125.257 118.701 1.00 61.82 C
ATOM 16 N7 G A1947 107.466 124.784 118.404 1.00 62.22 N
ATOM 17 C5 G A1947 107.237 123.795 119.352 1.00 62.51 C
ATOM 18 C6 G A1947 106.139 122.898 119.505 1.00 63.80 C
ATOM 19 O6 G A1947 105.130 122.766 118.788 1.00 63.75 O
ATOM 20 N1 G A1947 106.312 122.077 120.612 1.00 64.18 N
ATOM 21 C2 G A1947 107.399 122.093 121.452 1.00 62.54 C
ATOM 22 N2 G A1947 107.364 121.226 122.477 1.00 63.19 N
ATOM 23 N3 G A1947 108.435 122.895 121.305 1.00 61.14 N
ATOM 24 C4 G A1947 108.295 123.713 120.240 1.00 61.41 C
ATOM 25 P C A1948 113.713 122.741 117.278 1.00 60.63 P
ATOM 26 OP1 C A1948 115.127 122.319 117.199 1.00 60.08 O
ATOM 27 OP2 C A1948 113.026 123.179 116.037 1.00 60.89 O
ATOM 28 O5' C A1948 112.887 121.533 117.941 1.00 60.08 O
TER
ATOM 1 O3' G B1947 113.568 123.954 118.340 1.00 59.24 O
ATOM 2 P C B1948 113.713 122.741 117.278 1.00 60.63 P
ATOM 3 OP1 C B1948 115.127 122.319 117.199 1.00 60.08 O
ATOM 4 OP2 C B1948 113.026 123.179 116.037 1.00 60.89 O
ATOM 5 O5' C B1948 112.887 121.533 117.941 1.00 60.08 O
ATOM 6 C5' C B1948 113.157 121.105 119.311 1.00 60.10 C
ATOM 7 C4' C B1948 112.185 120.038 119.784 1.00 60.40 C
ATOM 8 O4' C B1948 110.878 120.572 120.092 1.00 61.19 O
ATOM 9 C3' C B1948 111.934 118.849 118.891 1.00 60.77 C
ATOM 10 O3' C B1948 112.993 117.913 118.982 1.00 60.46 O
ATOM 11 C2' C B1948 110.618 118.291 119.433 1.00 61.75 C
ATOM 12 O2' C B1948 110.729 117.349 120.484 1.00 62.55 O
ATOM 13 C1' C B1948 109.901 119.558 119.917 1.00 61.86 C
ATOM 14 N1 C B1948 108.896 120.043 118.952 1.00 62.07 N
ATOM 15 C2 C B1948 107.559 119.571 119.022 1.00 61.85 C
ATOM 16 O2 C B1948 107.208 118.859 119.971 1.00 61.81 O
ATOM 17 N3 C B1948 106.687 119.928 118.049 1.00 62.60 N
ATOM 18 C4 C B1948 107.085 120.730 117.057 1.00 62.57 C
ATOM 19 N4 C B1948 106.223 120.990 116.066 1.00 61.33 N
ATOM 20 C5 C B1948 108.396 121.285 117.018 1.00 62.56 C
ATOM 21 C6 C B1948 109.260 120.917 117.969 1.00 61.88 C
ATOM 22 P U B1949 113.461 117.146 117.662 1.00 61.95 P
ATOM 23 OP1 U B1949 114.269 115.966 118.060 1.00 62.02 O
ATOM 24 OP2 U B1949 114.035 118.158 116.737 1.00 59.16 O
ATOM 25 O5' U B1949 112.096 116.580 117.048 1.00 65.34 O
TER
ATOM 2 P G A1947 111.393 127.933 115.758 1.00 57.26 P
ATOM 3 OP1 G A1947 112.770 128.098 115.235 1.00 58.21 O
ATOM 4 OP2 G A1947 110.297 127.548 114.821 1.00 57.65 O
ATOM 5 O5' G A1947 111.470 126.867 116.952 1.00 57.08 O
ATOM 6 C5' G A1947 112.418 127.028 118.030 1.00 56.76 C
ATOM 7 C4' G A1947 112.275 125.935 119.068 1.00 57.71 C
ATOM 8 O4' G A1947 111.043 126.110 119.815 1.00 58.08 O
ATOM 9 C3' G A1947 112.268 124.483 118.630 1.00 58.22 C
ATOM 10 O3' G A1947 113.568 123.954 118.340 1.00 59.24 O
ATOM 11 C2' G A1947 111.612 123.806 119.832 1.00 58.84 C
ATOM 12 O2' G A1947 112.528 123.556 120.878 1.00 56.93 O
ATOM 13 C1' G A1947 110.587 124.856 120.288 1.00 59.54 C
ATOM 14 N9 G A1947 109.228 124.630 119.779 1.00 61.52 N
ATOM 15 C8 G A1947 108.646 125.257 118.701 1.00 61.82 C
ATOM 16 N7 G A1947 107.466 124.784 118.404 1.00 62.22 N
ATOM 17 C5 G A1947 107.237 123.795 119.352 1.00 62.51 C
ATOM 18 C6 G A1947 106.139 122.898 119.505 1.00 63.80 C
ATOM 19 O6 G A1947 105.130 122.766 118.788 1.00 63.75 O
ATOM 20 N1 G A1947 106.312 122.077 120.612 1.00 64.18 N
ATOM 21 C2 G A1947 107.399 122.093 121.452 1.00 62.54 C
ATOM 22 N2 G A1947 107.364 121.226 122.477 1.00 63.19 N
ATOM 23 N3 G A1947 108.435 122.895 121.305 1.00 61.14 N
ATOM 24 C4 G A1947 108.295 123.713 120.240 1.00 61.41 C
ATOM 25 P C A1948 113.713 122.741 117.278 1.00 60.63 P
ATOM 26 OP1 C A1948 115.127 122.319 117.199 1.00 60.08 O
ATOM 27 OP2 C A1948 113.026 123.179 116.037 1.00 60.89 O
ATOM 28 O5' C A1948 112.887 121.533 117.941 1.00 60.08 O
TER
ATOM 1 O3' G B1947 113.568 123.954 118.340 1.00 59.24 O
ATOM 2 P C B1948 113.713 122.741 117.278 1.00 60.63 P
ATOM 3 OP1 C B1948 115.127 122.319 117.199 1.00 60.08 O
ATOM 4 OP2 C B1948 113.026 123.179 116.037 1.00 60.89 O
ATOM 5 O5' C B1948 112.887 121.533 117.941 1.00 60.08 O
ATOM 6 C5' C B1948 113.157 121.105 119.311 1.00 60.10 C
ATOM 7 C4' C B1948 112.185 120.038 119.784 1.00 60.40 C
ATOM 8 O4' C B1948 110.878 120.572 120.092 1.00 61.19 O
ATOM 9 C3' C B1948 111.934 118.849 118.891 1.00 60.77 C
ATOM 10 O3' C B1948 112.993 117.913 118.982 1.00 60.46 O
ATOM 11 C2' C B1948 110.618 118.291 119.433 1.00 61.75 C
ATOM 12 O2' C B1948 110.729 117.349 120.484 1.00 62.55 O
ATOM 13 C1' C B1948 109.901 119.558 119.917 1.00 61.86 C
ATOM 14 N1 C B1948 108.896 120.043 118.952 1.00 62.07 N
ATOM 15 C2 C B1948 107.559 119.571 119.022 1.00 61.85 C
ATOM 16 O2 C B1948 107.208 118.859 119.971 1.00 61.81 O
ATOM 17 N3 C B1948 106.687 119.928 118.049 1.00 62.60 N
ATOM 18 C4 C B1948 107.085 120.730 117.057 1.00 62.57 C
ATOM 19 N4 C B1948 106.223 120.990 116.066 1.00 61.33 N
ATOM 20 C5 C B1948 108.396 121.285 117.018 1.00 62.56 C
ATOM 21 C6 C B1948 109.260 120.917 117.969 1.00 61.88 C
ATOM 22 P U B1949 113.461 117.146 117.662 1.00 61.95 P
ATOM 23 OP1 U B1949 114.269 115.966 118.060 1.00 62.02 O
ATOM 24 OP2 U B1949 114.035 118.158 116.737 1.00 59.16 O
ATOM 25 O5' U B1949 112.096 116.580 117.048 1.00 65.34 O
TER
Atoms:
OP1: (112.770,128.098,115.235)
OP2: (110.297,127.548,114.821)
C3': (112.268,124.483,118.630)
C1': (110.587,124.856,120.288)
C5': (112.418,127.028,118.030)
O6: (105.130,122.766,118.788)
O4': (111.043,126.110,119.815)
C8: (108.646,125.257,118.701)
C2: (107.399,122.093,121.452)
C6: (106.139,122.898,119.505)
C5: (107.237,123.795,119.352)
C4: (108.295,123.713,120.240)
P: (111.393,127.933,115.758)
C4': (112.275,125.935,119.068)
C2': (111.612,123.806,119.832)
O2': (112.528,123.556,120.878)
N1: (106.312,122.077,120.612)
N2: (107.364,121.226,122.477)
N3: (108.435,122.895,121.305)
N7: (107.466,124.784,118.404)
N9: (109.228,124.630,119.779)
O5': (111.470,126.867,116.952)
O3': (113.568,123.954,118.340)
OP2: (110.297,127.548,114.821)
C3': (112.268,124.483,118.630)
C1': (110.587,124.856,120.288)
C5': (112.418,127.028,118.030)
O6: (105.130,122.766,118.788)
O4': (111.043,126.110,119.815)
C8: (108.646,125.257,118.701)
C2: (107.399,122.093,121.452)
C6: (106.139,122.898,119.505)
C5: (107.237,123.795,119.352)
C4: (108.295,123.713,120.240)
P: (111.393,127.933,115.758)
C4': (112.275,125.935,119.068)
C2': (111.612,123.806,119.832)
O2': (112.528,123.556,120.878)
N1: (106.312,122.077,120.612)
N2: (107.364,121.226,122.477)
N3: (108.435,122.895,121.305)
N7: (107.466,124.784,118.404)
N9: (109.228,124.630,119.779)
O5': (111.470,126.867,116.952)
O3': (113.568,123.954,118.340)
C2: (107.559,119.571,119.022)
OP1: (115.127,122.319,117.199)
OP2: (113.026,123.179,116.037)
C4: (107.085,120.730,117.057)
O5': (112.887,121.533,117.941)
C3': (111.934,118.849,118.891)
C1': (109.901,119.558,119.917)
O4': (110.878,120.572,120.092)
C5': (113.157,121.105,119.311)
P: (113.713,122.741,117.278)
O2: (107.208,118.859,119.971)
C4': (112.185,120.038,119.784)
C2': (110.618,118.291,119.433)
O2': (110.729,117.349,120.484)
N1: (108.896,120.043,118.952)
N3: (106.687,119.928,118.049)
N4: (106.223,120.990,116.066)
C6: (109.260,120.917,117.969)
C5: (108.396,121.285,117.018)
O3': (112.993,117.913,118.982)
OP1: (115.127,122.319,117.199)
OP2: (113.026,123.179,116.037)
C4: (107.085,120.730,117.057)
O5': (112.887,121.533,117.941)
C3': (111.934,118.849,118.891)
C1': (109.901,119.558,119.917)
O4': (110.878,120.572,120.092)
C5': (113.157,121.105,119.311)
P: (113.713,122.741,117.278)
O2: (107.208,118.859,119.971)
C4': (112.185,120.038,119.784)
C2': (110.618,118.291,119.433)
O2': (110.729,117.349,120.484)
N1: (108.896,120.043,118.952)
N3: (106.687,119.928,118.049)
N4: (106.223,120.990,116.066)
C6: (109.260,120.917,117.969)
C5: (108.396,121.285,117.018)
O3': (112.993,117.913,118.982)
Image (generated by PyMOL):