Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1RNA:A8:A9
Extra
PDB:
ATOM 1 O3' U A 7 4.758 24.339 0.688 1.00 16.39 O
ATOM 2 P A A 8 6.205 24.843 0.103 1.00 16.80 P
ATOM 3 OP1 A A 8 5.979 25.602 -1.149 1.00 22.48 O
ATOM 4 OP2 A A 8 6.914 23.594 -0.138 1.00 24.77 O
ATOM 5 O5' A A 8 6.784 25.709 1.238 1.00 19.82 O
ATOM 6 C5' A A 8 5.983 26.730 1.886 1.00 14.47 C
ATOM 7 C4' A A 8 6.996 27.359 2.819 1.00 16.27 C
ATOM 8 O4' A A 8 7.207 26.467 3.894 1.00 18.90 O
ATOM 9 C3' A A 8 8.377 27.605 2.225 1.00 16.08 C
ATOM 10 O3' A A 8 8.473 28.769 1.400 1.00 11.57 O
ATOM 11 C2' A A 8 9.254 27.631 3.472 1.00 15.91 C
ATOM 12 O2' A A 8 9.193 28.894 4.125 1.00 12.64 O
ATOM 13 C1' A A 8 8.575 26.579 4.341 1.00 13.28 C
ATOM 14 N9 A A 8 9.350 25.321 4.204 1.00 6.23 N
ATOM 15 C8 A A 8 9.210 24.353 3.246 1.00 5.10 C
ATOM 16 N7 A A 8 10.066 23.376 3.379 1.00 7.76 N
ATOM 17 C5 A A 8 10.844 23.724 4.479 1.00 4.57 C
ATOM 18 C6 A A 8 11.939 23.090 5.112 1.00 6.81 C
ATOM 19 N6 A A 8 12.450 21.912 4.759 1.00 6.76 N
ATOM 20 N1 A A 8 12.443 23.773 6.188 1.00 2.72 N
ATOM 21 C2 A A 8 11.915 24.950 6.615 1.00 5.94 C
ATOM 22 N3 A A 8 10.895 25.588 6.050 1.00 4.94 N
ATOM 23 C4 A A 8 10.400 24.919 4.994 1.00 2.57 C
ATOM 24 P U A 9 9.592 29.220 0.530 1.00 12.72 P
ATOM 25 OP1 U A 9 9.462 30.446 -0.339 1.00 17.21 O
ATOM 26 OP2 U A 9 9.899 28.082 -0.383 1.00 14.19 O
ATOM 27 O5' U A 9 10.956 29.496 1.346 1.00 12.40 O
TER
ATOM 1 O3' A B 8 8.473 28.769 1.400 1.00 11.57 O
ATOM 2 P U B 9 9.592 29.220 0.530 1.00 12.72 P
ATOM 3 OP1 U B 9 9.462 30.446 -0.339 1.00 17.21 O
ATOM 4 OP2 U B 9 9.899 28.082 -0.383 1.00 14.19 O
ATOM 5 O5' U B 9 10.956 29.496 1.346 1.00 12.40 O
ATOM 6 C5' U B 9 11.198 30.571 2.284 1.00 7.71 C
ATOM 7 C4' U B 9 12.440 30.317 3.109 1.00 6.39 C
ATOM 8 O4' U B 9 12.331 29.144 3.885 1.00 6.98 O
ATOM 9 C3' U B 9 13.743 30.161 2.338 1.00 5.17 C
ATOM 10 O3' U B 9 14.299 31.419 1.940 1.00 10.03 O
ATOM 11 C2' U B 9 14.647 29.452 3.330 1.00 5.06 C
ATOM 12 O2' U B 9 15.203 30.500 4.111 1.00 5.32 O
ATOM 13 C1' U B 9 13.647 28.582 4.076 1.00 7.34 C
ATOM 14 N1 U B 9 13.627 27.199 3.556 1.00 7.85 N
ATOM 15 C2 U B 9 14.514 26.280 4.091 1.00 6.20 C
ATOM 16 O2 U B 9 15.322 26.601 4.960 1.00 7.64 O
ATOM 17 N3 U B 9 14.418 25.031 3.551 1.00 5.95 N
ATOM 18 C4 U B 9 13.542 24.678 2.573 1.00 2.00 C
ATOM 19 O4 U B 9 13.552 23.501 2.141 1.00 2.00 O
ATOM 20 C5 U B 9 12.614 25.637 2.077 1.00 3.51 C
ATOM 21 C6 U B 9 12.706 26.864 2.613 1.00 6.67 C
ATOM 22 P A B 10 14.879 31.642 0.437 1.00 20.17 P
ATOM 23 OP1 A B 10 15.087 33.105 0.413 1.00 19.84 O
ATOM 24 OP2 A B 10 13.975 31.165 -0.604 1.00 11.94 O
ATOM 25 O5' A B 10 16.131 30.736 0.579 1.00 14.92 O
TER
ATOM 2 P A A 8 6.205 24.843 0.103 1.00 16.80 P
ATOM 3 OP1 A A 8 5.979 25.602 -1.149 1.00 22.48 O
ATOM 4 OP2 A A 8 6.914 23.594 -0.138 1.00 24.77 O
ATOM 5 O5' A A 8 6.784 25.709 1.238 1.00 19.82 O
ATOM 6 C5' A A 8 5.983 26.730 1.886 1.00 14.47 C
ATOM 7 C4' A A 8 6.996 27.359 2.819 1.00 16.27 C
ATOM 8 O4' A A 8 7.207 26.467 3.894 1.00 18.90 O
ATOM 9 C3' A A 8 8.377 27.605 2.225 1.00 16.08 C
ATOM 10 O3' A A 8 8.473 28.769 1.400 1.00 11.57 O
ATOM 11 C2' A A 8 9.254 27.631 3.472 1.00 15.91 C
ATOM 12 O2' A A 8 9.193 28.894 4.125 1.00 12.64 O
ATOM 13 C1' A A 8 8.575 26.579 4.341 1.00 13.28 C
ATOM 14 N9 A A 8 9.350 25.321 4.204 1.00 6.23 N
ATOM 15 C8 A A 8 9.210 24.353 3.246 1.00 5.10 C
ATOM 16 N7 A A 8 10.066 23.376 3.379 1.00 7.76 N
ATOM 17 C5 A A 8 10.844 23.724 4.479 1.00 4.57 C
ATOM 18 C6 A A 8 11.939 23.090 5.112 1.00 6.81 C
ATOM 19 N6 A A 8 12.450 21.912 4.759 1.00 6.76 N
ATOM 20 N1 A A 8 12.443 23.773 6.188 1.00 2.72 N
ATOM 21 C2 A A 8 11.915 24.950 6.615 1.00 5.94 C
ATOM 22 N3 A A 8 10.895 25.588 6.050 1.00 4.94 N
ATOM 23 C4 A A 8 10.400 24.919 4.994 1.00 2.57 C
ATOM 24 P U A 9 9.592 29.220 0.530 1.00 12.72 P
ATOM 25 OP1 U A 9 9.462 30.446 -0.339 1.00 17.21 O
ATOM 26 OP2 U A 9 9.899 28.082 -0.383 1.00 14.19 O
ATOM 27 O5' U A 9 10.956 29.496 1.346 1.00 12.40 O
TER
ATOM 1 O3' A B 8 8.473 28.769 1.400 1.00 11.57 O
ATOM 2 P U B 9 9.592 29.220 0.530 1.00 12.72 P
ATOM 3 OP1 U B 9 9.462 30.446 -0.339 1.00 17.21 O
ATOM 4 OP2 U B 9 9.899 28.082 -0.383 1.00 14.19 O
ATOM 5 O5' U B 9 10.956 29.496 1.346 1.00 12.40 O
ATOM 6 C5' U B 9 11.198 30.571 2.284 1.00 7.71 C
ATOM 7 C4' U B 9 12.440 30.317 3.109 1.00 6.39 C
ATOM 8 O4' U B 9 12.331 29.144 3.885 1.00 6.98 O
ATOM 9 C3' U B 9 13.743 30.161 2.338 1.00 5.17 C
ATOM 10 O3' U B 9 14.299 31.419 1.940 1.00 10.03 O
ATOM 11 C2' U B 9 14.647 29.452 3.330 1.00 5.06 C
ATOM 12 O2' U B 9 15.203 30.500 4.111 1.00 5.32 O
ATOM 13 C1' U B 9 13.647 28.582 4.076 1.00 7.34 C
ATOM 14 N1 U B 9 13.627 27.199 3.556 1.00 7.85 N
ATOM 15 C2 U B 9 14.514 26.280 4.091 1.00 6.20 C
ATOM 16 O2 U B 9 15.322 26.601 4.960 1.00 7.64 O
ATOM 17 N3 U B 9 14.418 25.031 3.551 1.00 5.95 N
ATOM 18 C4 U B 9 13.542 24.678 2.573 1.00 2.00 C
ATOM 19 O4 U B 9 13.552 23.501 2.141 1.00 2.00 O
ATOM 20 C5 U B 9 12.614 25.637 2.077 1.00 3.51 C
ATOM 21 C6 U B 9 12.706 26.864 2.613 1.00 6.67 C
ATOM 22 P A B 10 14.879 31.642 0.437 1.00 20.17 P
ATOM 23 OP1 A B 10 15.087 33.105 0.413 1.00 19.84 O
ATOM 24 OP2 A B 10 13.975 31.165 -0.604 1.00 11.94 O
ATOM 25 O5' A B 10 16.131 30.736 0.579 1.00 14.92 O
TER
Atoms:
OP1: (5.979,25.602,-1.149)
OP2: (6.914,23.594,-0.138)
C3': (8.377,27.605,2.225)
C1': (8.575,26.579,4.341)
C5': (5.983,26.730,1.886)
O4': (7.207,26.467,3.894)
C8: (9.210,24.353,3.246)
O2': (9.193,28.894,4.125)
C6: (11.939,23.090,5.112)
C5: (10.844,23.724,4.479)
C4: (10.400,24.919,4.994)
P: (6.205,24.843,0.103)
C4': (6.996,27.359,2.819)
C2': (9.254,27.631,3.472)
C2: (11.915,24.950,6.615)
N1: (12.443,23.773,6.188)
N3: (10.895,25.588,6.050)
N6: (12.450,21.912,4.759)
N7: (10.066,23.376,3.379)
N9: (9.350,25.321,4.204)
O5': (6.784,25.709,1.238)
O3': (8.473,28.769,1.400)
OP2: (6.914,23.594,-0.138)
C3': (8.377,27.605,2.225)
C1': (8.575,26.579,4.341)
C5': (5.983,26.730,1.886)
O4': (7.207,26.467,3.894)
C8: (9.210,24.353,3.246)
O2': (9.193,28.894,4.125)
C6: (11.939,23.090,5.112)
C5: (10.844,23.724,4.479)
C4: (10.400,24.919,4.994)
P: (6.205,24.843,0.103)
C4': (6.996,27.359,2.819)
C2': (9.254,27.631,3.472)
C2: (11.915,24.950,6.615)
N1: (12.443,23.773,6.188)
N3: (10.895,25.588,6.050)
N6: (12.450,21.912,4.759)
N7: (10.066,23.376,3.379)
N9: (9.350,25.321,4.204)
O5': (6.784,25.709,1.238)
O3': (8.473,28.769,1.400)
C4: (13.542,24.678,2.573)
N3: (14.418,25.031,3.551)
OP1: (9.462,30.446,-0.339)
OP2: (9.899,28.082,-0.383)
C2: (14.514,26.280,4.091)
C1': (13.647,28.582,4.076)
C3': (13.743,30.161,2.338)
O5': (10.956,29.496,1.346)
O4': (12.331,29.144,3.885)
C5': (11.198,30.571,2.284)
P: (9.592,29.220,0.530)
C4': (12.440,30.317,3.109)
C2': (14.647,29.452,3.330)
O2': (15.203,30.500,4.111)
N1: (13.627,27.199,3.556)
O4: (13.552,23.501,2.141)
O2: (15.322,26.601,4.960)
C6: (12.706,26.864,2.613)
C5: (12.614,25.637,2.077)
O3': (14.299,31.419,1.940)
N3: (14.418,25.031,3.551)
OP1: (9.462,30.446,-0.339)
OP2: (9.899,28.082,-0.383)
C2: (14.514,26.280,4.091)
C1': (13.647,28.582,4.076)
C3': (13.743,30.161,2.338)
O5': (10.956,29.496,1.346)
O4': (12.331,29.144,3.885)
C5': (11.198,30.571,2.284)
P: (9.592,29.220,0.530)
C4': (12.440,30.317,3.109)
C2': (14.647,29.452,3.330)
O2': (15.203,30.500,4.111)
N1: (13.627,27.199,3.556)
O4: (13.552,23.501,2.141)
O2: (15.322,26.601,4.960)
C6: (12.706,26.864,2.613)
C5: (12.614,25.637,2.077)
O3': (14.299,31.419,1.940)
Image (generated by PyMOL):