ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:015:016

Extra

PDB:
ATOM 1 O3' G A 14 34.175 138.672 67.200 1.00 39.52 O
ATOM 2 P A A 15 34.574 137.868 65.868 1.00 39.44 P
ATOM 3 OP1 A A 15 36.044 137.668 65.870 1.00 40.09 O
ATOM 4 OP2 A A 15 33.925 138.483 64.691 1.00 39.53 O
ATOM 5 O5' A A 15 33.872 136.457 66.093 1.00 40.07 O
ATOM 6 C5' A A 15 34.319 135.559 67.118 1.00 37.74 C
ATOM 7 C4' A A 15 33.138 134.882 67.774 1.00 39.02 C
ATOM 8 O4' A A 15 32.346 135.846 68.520 1.00 39.47 O
ATOM 9 C3' A A 15 32.131 134.241 66.842 1.00 39.18 C
ATOM 10 O3' A A 15 32.588 132.979 66.387 1.00 39.71 O
ATOM 11 C2' A A 15 30.904 134.130 67.736 1.00 40.41 C
ATOM 12 O2' A A 15 30.990 133.051 68.639 1.00 41.67 O
ATOM 13 C1' A A 15 30.983 135.441 68.524 1.00 41.77 C
ATOM 14 N9 A A 15 30.177 136.515 67.937 1.00 45.32 N
ATOM 15 C8 A A 15 30.629 137.673 67.347 1.00 46.75 C
ATOM 16 N7 A A 15 29.673 138.456 66.918 1.00 45.56 N
ATOM 17 C5 A A 15 28.512 137.771 67.241 1.00 44.97 C
ATOM 18 C6 A A 15 27.157 138.068 67.036 1.00 45.53 C
ATOM 19 N6 A A 15 26.726 139.196 66.458 1.00 43.02 N
ATOM 20 N1 A A 15 26.245 137.159 67.453 1.00 45.01 N
ATOM 21 C2 A A 15 26.677 136.043 68.043 1.00 43.81 C
ATOM 22 N3 A A 15 27.924 135.656 68.302 1.00 46.26 N
ATOM 23 C4 A A 15 28.805 136.574 67.867 1.00 44.63 C
ATOM 24 P U A 16 32.156 132.453 64.930 1.00 39.10 P
ATOM 25 OP1 U A 16 32.623 131.036 64.817 1.00 37.67 O
ATOM 26 OP2 U A 16 32.581 133.442 63.919 1.00 37.21 O
ATOM 27 O5' U A 16 30.568 132.468 64.995 1.00 36.17 O
TER

ATOM 1 O3' A B 15 32.588 132.979 66.387 1.00 39.71 O
ATOM 2 P U B 16 32.156 132.453 64.930 1.00 39.10 P
ATOM 3 OP1 U B 16 32.623 131.036 64.817 1.00 37.67 O
ATOM 4 OP2 U B 16 32.581 133.442 63.919 1.00 37.21 O
ATOM 5 O5' U B 16 30.568 132.468 64.995 1.00 36.17 O
ATOM 6 C5' U B 16 29.853 131.556 65.844 1.00 33.17 C
ATOM 7 C4' U B 16 28.380 131.847 65.778 1.00 34.71 C
ATOM 8 O4' U B 16 28.145 133.201 66.234 1.00 34.87 O
ATOM 9 C3' U B 16 27.789 131.819 64.379 1.00 35.55 C
ATOM 10 O3' U B 16 27.461 130.500 64.012 1.00 36.09 O
ATOM 11 C2' U B 16 26.572 132.718 64.514 1.00 36.79 C
ATOM 12 O2' U B 16 25.482 132.083 65.152 1.00 39.23 O
ATOM 13 C1' U B 16 27.109 133.787 65.463 1.00 37.47 C
ATOM 14 N1 U B 16 27.632 135.000 64.813 1.00 39.10 N
ATOM 15 C2 U B 16 26.713 135.961 64.447 1.00 37.22 C
ATOM 16 O2 U B 16 25.523 135.786 64.515 1.00 39.01 O
ATOM 17 N3 U B 16 27.249 137.134 63.991 1.00 35.89 N
ATOM 18 C4 U B 16 28.578 137.428 63.831 1.00 35.90 C
ATOM 19 O4 U B 16 28.897 138.549 63.449 1.00 37.10 O
ATOM 20 C5 U B 16 29.477 136.352 64.145 1.00 35.20 C
ATOM 21 C6 U B 16 28.987 135.203 64.613 1.00 37.11 C
ATOM 22 P U B 17 27.753 130.001 62.518 1.00 43.85 P
ATOM 23 OP1 U B 17 27.527 128.529 62.524 1.00 41.15 O
ATOM 24 OP2 U B 17 29.056 130.541 62.054 1.00 39.69 O
ATOM 25 O5' U B 17 26.589 130.689 61.671 1.00 43.09 O
TER

Atoms:
OP1: (36.044,137.668,65.870)
OP2: (33.925,138.483,64.691)
C3': (32.131,134.241,66.842)
C1': (30.983,135.441,68.524)
C5': (34.319,135.559,67.118)
O4': (32.346,135.846,68.520)
C8: (30.629,137.673,67.347)
O2': (30.990,133.051,68.639)
C6: (27.157,138.068,67.036)
C5: (28.512,137.771,67.241)
C4: (28.805,136.574,67.867)
P: (34.574,137.868,65.868)
C4': (33.138,134.882,67.774)
C2': (30.904,134.130,67.736)
C2: (26.677,136.043,68.043)
N1: (26.245,137.159,67.453)
N3: (27.924,135.656,68.302)
N6: (26.726,139.196,66.458)
N7: (29.673,138.456,66.918)
N9: (30.177,136.515,67.937)
O5': (33.872,136.457,66.093)
O3': (32.588,132.979,66.387)
C4: (28.578,137.428,63.831)
N3: (27.249,137.134,63.991)
OP1: (32.623,131.036,64.817)
OP2: (32.581,133.442,63.919)
C2: (26.713,135.961,64.447)
C1': (27.109,133.787,65.463)
C3': (27.789,131.819,64.379)
O5': (30.568,132.468,64.995)
O4': (28.145,133.201,66.234)
C5': (29.853,131.556,65.844)
P: (32.156,132.453,64.930)
C4': (28.380,131.847,65.778)
C2': (26.572,132.718,64.514)
O2': (25.482,132.083,65.152)
N1: (27.632,135.000,64.813)
O4: (28.897,138.549,63.449)
O2: (25.523,135.786,64.515)
C6: (28.987,135.203,64.613)
C5: (29.477,136.352,64.145)
O3': (27.461,130.500,64.012)
Image (generated by PyMOL):
PyMOL image
show in jmol