ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:X96:X97

Extra

PDB:
ATOM 1 O3' G A 95 15.412 17.513 16.239 1.00 20.16 O
ATOM 2 P A A 96 14.298 16.652 15.482 1.00 22.97 P
ATOM 3 OP1 A A 96 13.070 16.897 16.288 1.00 24.66 O
ATOM 4 OP2 A A 96 14.839 15.300 15.285 1.00 18.33 O
ATOM 5 O5' A A 96 14.170 17.338 14.052 1.00 22.86 O
ATOM 6 C5' A A 96 13.475 18.554 13.884 1.00 21.36 C
ATOM 7 C4' A A 96 13.344 18.867 12.419 1.00 23.05 C
ATOM 8 O4' A A 96 14.656 19.072 11.835 1.00 21.21 O
ATOM 9 C3' A A 96 12.743 17.753 11.586 1.00 26.09 C
ATOM 10 O3' A A 96 11.332 17.732 11.686 1.00 29.32 O
ATOM 11 C2' A A 96 13.265 18.075 10.195 1.00 24.02 C
ATOM 12 O2' A A 96 12.568 19.193 9.675 1.00 26.68 O
ATOM 13 C1' A A 96 14.680 18.544 10.526 1.00 23.33 C
ATOM 14 N9 A A 96 15.635 17.426 10.475 1.00 22.78 N
ATOM 15 C8 A A 96 16.063 16.610 11.492 1.00 22.61 C
ATOM 16 N7 A A 96 16.922 15.698 11.102 1.00 20.51 N
ATOM 17 C5 A A 96 17.072 15.947 9.738 1.00 21.04 C
ATOM 18 C6 A A 96 17.847 15.328 8.737 1.00 20.33 C
ATOM 19 N6 A A 96 18.653 14.303 8.960 1.00 18.20 N
ATOM 20 N1 A A 96 17.760 15.800 7.480 1.00 18.47 N
ATOM 21 C2 A A 96 16.953 16.834 7.261 1.00 21.97 C
ATOM 22 N3 A A 96 16.182 17.517 8.108 1.00 22.83 N
ATOM 23 C4 A A 96 16.285 16.997 9.344 1.00 21.89 C
ATOM 24 P U A 97 10.556 16.339 11.589 1.00 30.32 P
ATOM 25 OP1 U A 97 9.144 16.730 11.830 1.00 36.00 O
ATOM 26 OP2 U A 97 11.175 15.255 12.387 1.00 27.26 O
ATOM 27 O5' U A 97 10.790 15.950 10.064 1.00 32.16 O
TER

ATOM 1 O3' A B 96 11.332 17.732 11.686 1.00 29.32 O
ATOM 2 P U B 97 10.556 16.339 11.589 1.00 30.32 P
ATOM 3 OP1 U B 97 9.144 16.730 11.830 1.00 36.00 O
ATOM 4 OP2 U B 97 11.175 15.255 12.387 1.00 27.26 O
ATOM 5 O5' U B 97 10.790 15.950 10.064 1.00 32.16 O
ATOM 6 C5' U B 97 10.242 16.761 9.040 1.00 32.78 C
ATOM 7 C4' U B 97 10.719 16.294 7.691 1.00 28.11 C
ATOM 8 O4' U B 97 12.148 16.530 7.583 1.00 26.46 O
ATOM 9 C3' U B 97 10.589 14.806 7.410 1.00 30.37 C
ATOM 10 O3' U B 97 9.272 14.398 7.076 1.00 31.63 O
ATOM 11 C2' U B 97 11.581 14.650 6.272 1.00 29.62 C
ATOM 12 O2' U B 97 11.049 15.274 5.114 1.00 30.10 O
ATOM 13 C1' U B 97 12.729 15.520 6.788 1.00 26.37 C
ATOM 14 N1 U B 97 13.670 14.697 7.582 1.00 25.35 N
ATOM 15 C2 U B 97 14.614 14.019 6.835 1.00 24.19 C
ATOM 16 O2 U B 97 14.659 14.109 5.616 1.00 25.09 O
ATOM 17 N3 U B 97 15.484 13.245 7.550 1.00 20.30 N
ATOM 18 C4 U B 97 15.498 13.083 8.922 1.00 21.00 C
ATOM 19 O4 U B 97 16.356 12.348 9.410 1.00 22.92 O
ATOM 20 C5 U B 97 14.494 13.818 9.636 1.00 22.92 C
ATOM 21 C6 U B 97 13.628 14.589 8.952 1.00 24.82 C
ATOM 22 P U B 98 8.808 12.880 7.311 1.00 38.49 P
ATOM 23 OP1 U B 98 7.425 12.834 6.768 1.00 38.70 O
ATOM 24 OP2 U B 98 9.088 12.446 8.708 1.00 36.39 O
ATOM 25 O5' U B 98 9.769 12.041 6.357 1.00 30.93 O
TER

Atoms:
OP1: (13.070,16.897,16.288)
OP2: (14.839,15.300,15.285)
C3': (12.743,17.753,11.586)
C1': (14.680,18.544,10.526)
C5': (13.475,18.554,13.884)
O4': (14.656,19.072,11.835)
C8: (16.063,16.610,11.492)
O2': (12.568,19.193,9.675)
C6: (17.847,15.328,8.737)
C5: (17.072,15.947,9.738)
C4: (16.285,16.997,9.344)
P: (14.298,16.652,15.482)
C4': (13.344,18.867,12.419)
C2': (13.265,18.075,10.195)
C2: (16.953,16.834,7.261)
N1: (17.760,15.800,7.480)
N3: (16.182,17.517,8.108)
N6: (18.653,14.303,8.960)
N7: (16.922,15.698,11.102)
N9: (15.635,17.426,10.475)
O5': (14.170,17.338,14.052)
O3': (11.332,17.732,11.686)
C4: (15.498,13.083,8.922)
N3: (15.484,13.245,7.550)
OP1: (9.144,16.730,11.830)
OP2: (11.175,15.255,12.387)
C2: (14.614,14.019,6.835)
C1': (12.729,15.520,6.788)
C3': (10.589,14.806,7.410)
O5': (10.790,15.950,10.064)
O4': (12.148,16.530,7.583)
C5': (10.242,16.761,9.040)
P: (10.556,16.339,11.589)
C4': (10.719,16.294,7.691)
C2': (11.581,14.650,6.272)
O2': (11.049,15.274,5.114)
N1: (13.670,14.697,7.582)
O4: (16.356,12.348,9.410)
O2: (14.659,14.109,5.616)
C6: (13.628,14.589,8.952)
C5: (14.494,13.818,9.636)
O3': (9.272,14.398,7.076)
Image (generated by PyMOL):
PyMOL image
show in jmol