Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A110:A111
Extra
PDB:
ATOM 1 O3' G A 109 -21.945 -65.481 72.338 1.00 11.80 O
ATOM 2 P A A 110 -22.104 -64.374 71.213 1.00 0.01 P
ATOM 3 OP1 A A 110 -21.932 -63.068 71.867 1.00 0.01 O
ATOM 4 OP2 A A 110 -23.361 -64.650 70.508 1.00 0.01 O
ATOM 5 O5' A A 110 -20.855 -64.684 70.272 1.00 0.01 O
ATOM 6 C5' A A 110 -19.572 -64.887 70.859 1.00 0.01 C
ATOM 7 C4' A A 110 -18.530 -65.331 69.865 1.00 0.01 C
ATOM 8 O4' A A 110 -18.714 -66.723 69.553 1.00 0.01 O
ATOM 9 C3' A A 110 -18.541 -64.646 68.520 1.00 0.01 C
ATOM 10 O3' A A 110 -17.918 -63.378 68.550 1.00 0.01 O
ATOM 11 C2' A A 110 -17.827 -65.660 67.636 1.00 0.01 C
ATOM 12 O2' A A 110 -16.428 -65.605 67.823 1.00 0.01 O
ATOM 13 C1' A A 110 -18.342 -66.970 68.217 1.00 0.01 C
ATOM 14 N9 A A 110 -19.522 -67.436 67.493 1.00 0.20 N
ATOM 15 C8 A A 110 -20.861 -67.391 67.833 1.00 0.20 C
ATOM 16 N7 A A 110 -21.657 -67.846 66.888 1.00 0.20 N
ATOM 17 C5 A A 110 -20.770 -68.191 65.895 1.00 0.20 C
ATOM 18 C6 A A 110 -20.977 -68.729 64.664 1.00 0.20 C
ATOM 19 N6 A A 110 -22.174 -69.027 64.224 1.00 0.20 N
ATOM 20 N1 A A 110 -19.911 -68.952 63.904 1.00 0.20 N
ATOM 21 C2 A A 110 -18.706 -68.649 64.390 1.00 0.20 C
ATOM 22 N3 A A 110 -18.352 -68.130 65.566 1.00 0.20 N
ATOM 23 C4 A A 110 -19.466 -67.938 66.252 1.00 0.20 C
ATOM 24 P U A 111 -18.454 -62.199 67.611 1.00 0.01 P
ATOM 25 OP1 U A 111 -17.563 -61.032 67.825 1.00 0.01 O
ATOM 26 OP2 U A 111 -19.924 -62.053 67.871 1.00 0.01 O
ATOM 27 O5' U A 111 -18.210 -62.786 66.160 1.00 0.01 O
TER
ATOM 1 O3' A B 110 -17.918 -63.378 68.550 1.00 0.01 O
ATOM 2 P U B 111 -18.454 -62.199 67.611 1.00 0.01 P
ATOM 3 OP1 U B 111 -17.563 -61.032 67.825 1.00 0.01 O
ATOM 4 OP2 U B 111 -19.924 -62.053 67.871 1.00 0.01 O
ATOM 5 O5' U B 111 -18.210 -62.786 66.160 1.00 0.01 O
ATOM 6 C5' U B 111 -16.978 -62.600 65.514 1.00 0.01 C
ATOM 7 C4' U B 111 -16.928 -63.353 64.227 1.00 0.01 C
ATOM 8 O4' U B 111 -17.521 -64.649 64.395 1.00 0.01 O
ATOM 9 C3' U B 111 -17.708 -62.765 63.083 1.00 0.01 C
ATOM 10 O3' U B 111 -17.048 -61.689 62.482 1.00 0.01 O
ATOM 11 C2' U B 111 -17.828 -63.944 62.166 1.00 0.01 C
ATOM 12 O2' U B 111 -16.607 -64.158 61.489 1.00 0.01 O
ATOM 13 C1' U B 111 -18.045 -65.073 63.162 1.00 0.01 C
ATOM 14 N1 U B 111 -19.466 -65.354 63.322 1.00 0.02 N
ATOM 15 C2 U B 111 -20.043 -66.224 62.450 1.00 0.02 C
ATOM 16 O2 U B 111 -19.428 -66.805 61.588 1.00 0.02 O
ATOM 17 N3 U B 111 -21.366 -66.379 62.649 1.00 0.02 N
ATOM 18 C4 U B 111 -22.134 -65.769 63.591 1.00 0.02 C
ATOM 19 O4 U B 111 -23.327 -66.002 63.668 1.00 0.02 O
ATOM 20 C5 U B 111 -21.468 -64.885 64.443 1.00 0.02 C
ATOM 21 C6 U B 111 -20.175 -64.705 64.273 1.00 0.02 C
ATOM 22 P U B 112 -17.728 -60.266 62.462 1.00 6.02 P
ATOM 23 OP1 U B 112 -16.708 -59.301 62.003 1.00 6.02 O
ATOM 24 OP2 U B 112 -18.349 -60.075 63.782 1.00 6.02 O
ATOM 25 O5' U B 112 -18.831 -60.448 61.358 1.00 6.02 O
TER
ATOM 2 P A A 110 -22.104 -64.374 71.213 1.00 0.01 P
ATOM 3 OP1 A A 110 -21.932 -63.068 71.867 1.00 0.01 O
ATOM 4 OP2 A A 110 -23.361 -64.650 70.508 1.00 0.01 O
ATOM 5 O5' A A 110 -20.855 -64.684 70.272 1.00 0.01 O
ATOM 6 C5' A A 110 -19.572 -64.887 70.859 1.00 0.01 C
ATOM 7 C4' A A 110 -18.530 -65.331 69.865 1.00 0.01 C
ATOM 8 O4' A A 110 -18.714 -66.723 69.553 1.00 0.01 O
ATOM 9 C3' A A 110 -18.541 -64.646 68.520 1.00 0.01 C
ATOM 10 O3' A A 110 -17.918 -63.378 68.550 1.00 0.01 O
ATOM 11 C2' A A 110 -17.827 -65.660 67.636 1.00 0.01 C
ATOM 12 O2' A A 110 -16.428 -65.605 67.823 1.00 0.01 O
ATOM 13 C1' A A 110 -18.342 -66.970 68.217 1.00 0.01 C
ATOM 14 N9 A A 110 -19.522 -67.436 67.493 1.00 0.20 N
ATOM 15 C8 A A 110 -20.861 -67.391 67.833 1.00 0.20 C
ATOM 16 N7 A A 110 -21.657 -67.846 66.888 1.00 0.20 N
ATOM 17 C5 A A 110 -20.770 -68.191 65.895 1.00 0.20 C
ATOM 18 C6 A A 110 -20.977 -68.729 64.664 1.00 0.20 C
ATOM 19 N6 A A 110 -22.174 -69.027 64.224 1.00 0.20 N
ATOM 20 N1 A A 110 -19.911 -68.952 63.904 1.00 0.20 N
ATOM 21 C2 A A 110 -18.706 -68.649 64.390 1.00 0.20 C
ATOM 22 N3 A A 110 -18.352 -68.130 65.566 1.00 0.20 N
ATOM 23 C4 A A 110 -19.466 -67.938 66.252 1.00 0.20 C
ATOM 24 P U A 111 -18.454 -62.199 67.611 1.00 0.01 P
ATOM 25 OP1 U A 111 -17.563 -61.032 67.825 1.00 0.01 O
ATOM 26 OP2 U A 111 -19.924 -62.053 67.871 1.00 0.01 O
ATOM 27 O5' U A 111 -18.210 -62.786 66.160 1.00 0.01 O
TER
ATOM 1 O3' A B 110 -17.918 -63.378 68.550 1.00 0.01 O
ATOM 2 P U B 111 -18.454 -62.199 67.611 1.00 0.01 P
ATOM 3 OP1 U B 111 -17.563 -61.032 67.825 1.00 0.01 O
ATOM 4 OP2 U B 111 -19.924 -62.053 67.871 1.00 0.01 O
ATOM 5 O5' U B 111 -18.210 -62.786 66.160 1.00 0.01 O
ATOM 6 C5' U B 111 -16.978 -62.600 65.514 1.00 0.01 C
ATOM 7 C4' U B 111 -16.928 -63.353 64.227 1.00 0.01 C
ATOM 8 O4' U B 111 -17.521 -64.649 64.395 1.00 0.01 O
ATOM 9 C3' U B 111 -17.708 -62.765 63.083 1.00 0.01 C
ATOM 10 O3' U B 111 -17.048 -61.689 62.482 1.00 0.01 O
ATOM 11 C2' U B 111 -17.828 -63.944 62.166 1.00 0.01 C
ATOM 12 O2' U B 111 -16.607 -64.158 61.489 1.00 0.01 O
ATOM 13 C1' U B 111 -18.045 -65.073 63.162 1.00 0.01 C
ATOM 14 N1 U B 111 -19.466 -65.354 63.322 1.00 0.02 N
ATOM 15 C2 U B 111 -20.043 -66.224 62.450 1.00 0.02 C
ATOM 16 O2 U B 111 -19.428 -66.805 61.588 1.00 0.02 O
ATOM 17 N3 U B 111 -21.366 -66.379 62.649 1.00 0.02 N
ATOM 18 C4 U B 111 -22.134 -65.769 63.591 1.00 0.02 C
ATOM 19 O4 U B 111 -23.327 -66.002 63.668 1.00 0.02 O
ATOM 20 C5 U B 111 -21.468 -64.885 64.443 1.00 0.02 C
ATOM 21 C6 U B 111 -20.175 -64.705 64.273 1.00 0.02 C
ATOM 22 P U B 112 -17.728 -60.266 62.462 1.00 6.02 P
ATOM 23 OP1 U B 112 -16.708 -59.301 62.003 1.00 6.02 O
ATOM 24 OP2 U B 112 -18.349 -60.075 63.782 1.00 6.02 O
ATOM 25 O5' U B 112 -18.831 -60.448 61.358 1.00 6.02 O
TER
Atoms:
OP1: (-21.932,-63.068,71.867)
OP2: (-23.361,-64.650,70.508)
C3': (-18.541,-64.646,68.520)
C1': (-18.342,-66.970,68.217)
C5': (-19.572,-64.887,70.859)
O4': (-18.714,-66.723,69.553)
C8: (-20.861,-67.391,67.833)
O2': (-16.428,-65.605,67.823)
C6: (-20.977,-68.729,64.664)
C5: (-20.770,-68.191,65.895)
C4: (-19.466,-67.938,66.252)
P: (-22.104,-64.374,71.213)
C4': (-18.530,-65.331,69.865)
C2': (-17.827,-65.660,67.636)
C2: (-18.706,-68.649,64.390)
N1: (-19.911,-68.952,63.904)
N3: (-18.352,-68.130,65.566)
N6: (-22.174,-69.027,64.224)
N7: (-21.657,-67.846,66.888)
N9: (-19.522,-67.436,67.493)
O5': (-20.855,-64.684,70.272)
O3': (-17.918,-63.378,68.550)
OP2: (-23.361,-64.650,70.508)
C3': (-18.541,-64.646,68.520)
C1': (-18.342,-66.970,68.217)
C5': (-19.572,-64.887,70.859)
O4': (-18.714,-66.723,69.553)
C8: (-20.861,-67.391,67.833)
O2': (-16.428,-65.605,67.823)
C6: (-20.977,-68.729,64.664)
C5: (-20.770,-68.191,65.895)
C4: (-19.466,-67.938,66.252)
P: (-22.104,-64.374,71.213)
C4': (-18.530,-65.331,69.865)
C2': (-17.827,-65.660,67.636)
C2: (-18.706,-68.649,64.390)
N1: (-19.911,-68.952,63.904)
N3: (-18.352,-68.130,65.566)
N6: (-22.174,-69.027,64.224)
N7: (-21.657,-67.846,66.888)
N9: (-19.522,-67.436,67.493)
O5': (-20.855,-64.684,70.272)
O3': (-17.918,-63.378,68.550)
C4: (-22.134,-65.769,63.591)
N3: (-21.366,-66.379,62.649)
OP1: (-17.563,-61.032,67.825)
OP2: (-19.924,-62.053,67.871)
C2: (-20.043,-66.224,62.450)
C1': (-18.045,-65.073,63.162)
C3': (-17.708,-62.765,63.083)
O5': (-18.210,-62.786,66.160)
O4': (-17.521,-64.649,64.395)
C5': (-16.978,-62.600,65.514)
P: (-18.454,-62.199,67.611)
C4': (-16.928,-63.353,64.227)
C2': (-17.828,-63.944,62.166)
O2': (-16.607,-64.158,61.489)
N1: (-19.466,-65.354,63.322)
O4: (-23.327,-66.002,63.668)
O2: (-19.428,-66.805,61.588)
C6: (-20.175,-64.705,64.273)
C5: (-21.468,-64.885,64.443)
O3': (-17.048,-61.689,62.482)
N3: (-21.366,-66.379,62.649)
OP1: (-17.563,-61.032,67.825)
OP2: (-19.924,-62.053,67.871)
C2: (-20.043,-66.224,62.450)
C1': (-18.045,-65.073,63.162)
C3': (-17.708,-62.765,63.083)
O5': (-18.210,-62.786,66.160)
O4': (-17.521,-64.649,64.395)
C5': (-16.978,-62.600,65.514)
P: (-18.454,-62.199,67.611)
C4': (-16.928,-63.353,64.227)
C2': (-17.828,-63.944,62.166)
O2': (-16.607,-64.158,61.489)
N1: (-19.466,-65.354,63.322)
O4: (-23.327,-66.002,63.668)
O2: (-19.428,-66.805,61.588)
C6: (-20.175,-64.705,64.273)
C5: (-21.468,-64.885,64.443)
O3': (-17.048,-61.689,62.482)
Image (generated by PyMOL):