Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BNY:S5:S7
Extra
PDB:
ATOM 1 O3' G A 4 -75.949 -57.197 -41.330 0.50 59.49 O
ATOM 2 P A A 5 -77.095 -58.325 -41.318 0.50 60.14 P
ATOM 3 OP1 A A 5 -76.686 -59.431 -42.213 0.50 59.95 O
ATOM 4 OP2 A A 5 -78.386 -57.632 -41.554 0.50 59.61 O
ATOM 5 O5' A A 5 -77.086 -58.872 -39.821 0.50 61.90 O
ATOM 6 C5' A A 5 -75.881 -59.340 -39.221 0.50 64.71 C
ATOM 7 C4' A A 5 -76.035 -59.415 -37.718 0.50 67.59 C
ATOM 8 O4' A A 5 -76.426 -58.112 -37.214 0.50 67.95 O
ATOM 9 C3' A A 5 -77.116 -60.348 -37.198 0.50 69.12 C
ATOM 10 O3' A A 5 -76.615 -61.673 -37.091 0.50 72.10 O
ATOM 11 C2' A A 5 -77.406 -59.772 -35.818 0.50 68.55 C
ATOM 12 O2' A A 5 -76.473 -60.189 -34.843 0.50 68.21 O
ATOM 13 C1' A A 5 -77.251 -58.272 -36.073 0.50 68.37 C
ATOM 14 N9 A A 5 -78.521 -57.591 -36.317 0.50 68.56 N
ATOM 15 C8 A A 5 -78.967 -57.003 -37.476 0.50 68.39 C
ATOM 16 N7 A A 5 -80.154 -56.457 -37.368 0.50 68.30 N
ATOM 17 C5 A A 5 -80.515 -56.705 -36.050 0.50 68.91 C
ATOM 18 C6 A A 5 -81.662 -56.379 -35.305 0.50 69.38 C
ATOM 19 N6 A A 5 -82.700 -55.701 -35.802 0.50 70.05 N
ATOM 20 N1 A A 5 -81.708 -56.778 -34.013 0.50 69.38 N
ATOM 21 C2 A A 5 -80.665 -57.455 -33.515 0.50 68.44 C
ATOM 22 N3 A A 5 -79.532 -57.817 -34.113 0.50 68.23 N
ATOM 23 C4 A A 5 -79.520 -57.406 -35.394 0.50 68.63 C
ATOM 24 P U A 6 -77.637 -62.908 -37.027 0.50 74.30 P
ATOM 25 OP1 U A 6 -76.856 -64.147 -37.261 0.50 74.37 O
ATOM 26 OP2 U A 6 -78.782 -62.580 -37.916 0.50 73.74 O
ATOM 27 O5' U A 6 -78.150 -62.925 -35.517 0.50 74.97 O
TER
ATOM 1 O3' U B 6 -78.919 -63.936 -31.321 0.50 78.58 O
ATOM 2 P U B 7 -80.473 -64.152 -30.983 0.50 78.14 P
ATOM 3 OP1 U B 7 -80.575 -64.731 -29.619 0.50 77.53 O
ATOM 4 OP2 U B 7 -81.094 -64.860 -32.131 0.50 77.73 O
ATOM 5 O5' U B 7 -81.086 -62.687 -30.940 0.50 75.58 O
ATOM 6 C5' U B 7 -82.492 -62.510 -30.890 0.50 72.62 C
ATOM 7 C4' U B 7 -82.839 -61.051 -30.983 0.50 70.21 C
ATOM 8 O4' U B 7 -82.181 -60.512 -32.158 0.50 69.94 O
ATOM 9 C3' U B 7 -84.331 -60.793 -31.164 0.50 69.31 C
ATOM 10 O3' U B 7 -84.742 -59.760 -30.278 0.50 67.19 O
ATOM 11 C2' U B 7 -84.463 -60.453 -32.648 0.50 69.70 C
ATOM 12 O2' U B 7 -85.539 -59.577 -32.923 0.50 70.64 O
ATOM 13 C1' U B 7 -83.114 -59.797 -32.937 0.50 69.63 C
ATOM 14 N1 U B 7 -82.678 -59.872 -34.339 0.50 68.79 N
ATOM 15 C2 U B 7 -83.364 -59.121 -35.275 0.50 68.68 C
ATOM 16 O2 U B 7 -84.324 -58.423 -34.991 0.50 68.74 O
ATOM 17 N3 U B 7 -82.881 -59.216 -36.558 0.50 68.63 N
ATOM 18 C4 U B 7 -81.809 -59.973 -36.990 0.50 68.44 C
ATOM 19 O4 U B 7 -81.474 -59.931 -38.176 0.50 67.65 O
ATOM 20 C5 U B 7 -81.164 -60.732 -35.964 0.50 68.26 C
ATOM 21 C6 U B 7 -81.610 -60.658 -34.706 0.50 68.42 C
ATOM 22 P A B 8 -85.173 -60.127 -28.775 0.50 65.04 P
ATOM 23 OP1 A B 8 -84.093 -60.940 -28.161 0.50 64.66 O
ATOM 24 OP2 A B 8 -86.557 -60.659 -28.821 0.50 64.61 O
ATOM 25 O5' A B 8 -85.216 -58.717 -28.039 0.50 63.71 O
TER
ATOM 2 P A A 5 -77.095 -58.325 -41.318 0.50 60.14 P
ATOM 3 OP1 A A 5 -76.686 -59.431 -42.213 0.50 59.95 O
ATOM 4 OP2 A A 5 -78.386 -57.632 -41.554 0.50 59.61 O
ATOM 5 O5' A A 5 -77.086 -58.872 -39.821 0.50 61.90 O
ATOM 6 C5' A A 5 -75.881 -59.340 -39.221 0.50 64.71 C
ATOM 7 C4' A A 5 -76.035 -59.415 -37.718 0.50 67.59 C
ATOM 8 O4' A A 5 -76.426 -58.112 -37.214 0.50 67.95 O
ATOM 9 C3' A A 5 -77.116 -60.348 -37.198 0.50 69.12 C
ATOM 10 O3' A A 5 -76.615 -61.673 -37.091 0.50 72.10 O
ATOM 11 C2' A A 5 -77.406 -59.772 -35.818 0.50 68.55 C
ATOM 12 O2' A A 5 -76.473 -60.189 -34.843 0.50 68.21 O
ATOM 13 C1' A A 5 -77.251 -58.272 -36.073 0.50 68.37 C
ATOM 14 N9 A A 5 -78.521 -57.591 -36.317 0.50 68.56 N
ATOM 15 C8 A A 5 -78.967 -57.003 -37.476 0.50 68.39 C
ATOM 16 N7 A A 5 -80.154 -56.457 -37.368 0.50 68.30 N
ATOM 17 C5 A A 5 -80.515 -56.705 -36.050 0.50 68.91 C
ATOM 18 C6 A A 5 -81.662 -56.379 -35.305 0.50 69.38 C
ATOM 19 N6 A A 5 -82.700 -55.701 -35.802 0.50 70.05 N
ATOM 20 N1 A A 5 -81.708 -56.778 -34.013 0.50 69.38 N
ATOM 21 C2 A A 5 -80.665 -57.455 -33.515 0.50 68.44 C
ATOM 22 N3 A A 5 -79.532 -57.817 -34.113 0.50 68.23 N
ATOM 23 C4 A A 5 -79.520 -57.406 -35.394 0.50 68.63 C
ATOM 24 P U A 6 -77.637 -62.908 -37.027 0.50 74.30 P
ATOM 25 OP1 U A 6 -76.856 -64.147 -37.261 0.50 74.37 O
ATOM 26 OP2 U A 6 -78.782 -62.580 -37.916 0.50 73.74 O
ATOM 27 O5' U A 6 -78.150 -62.925 -35.517 0.50 74.97 O
TER
ATOM 1 O3' U B 6 -78.919 -63.936 -31.321 0.50 78.58 O
ATOM 2 P U B 7 -80.473 -64.152 -30.983 0.50 78.14 P
ATOM 3 OP1 U B 7 -80.575 -64.731 -29.619 0.50 77.53 O
ATOM 4 OP2 U B 7 -81.094 -64.860 -32.131 0.50 77.73 O
ATOM 5 O5' U B 7 -81.086 -62.687 -30.940 0.50 75.58 O
ATOM 6 C5' U B 7 -82.492 -62.510 -30.890 0.50 72.62 C
ATOM 7 C4' U B 7 -82.839 -61.051 -30.983 0.50 70.21 C
ATOM 8 O4' U B 7 -82.181 -60.512 -32.158 0.50 69.94 O
ATOM 9 C3' U B 7 -84.331 -60.793 -31.164 0.50 69.31 C
ATOM 10 O3' U B 7 -84.742 -59.760 -30.278 0.50 67.19 O
ATOM 11 C2' U B 7 -84.463 -60.453 -32.648 0.50 69.70 C
ATOM 12 O2' U B 7 -85.539 -59.577 -32.923 0.50 70.64 O
ATOM 13 C1' U B 7 -83.114 -59.797 -32.937 0.50 69.63 C
ATOM 14 N1 U B 7 -82.678 -59.872 -34.339 0.50 68.79 N
ATOM 15 C2 U B 7 -83.364 -59.121 -35.275 0.50 68.68 C
ATOM 16 O2 U B 7 -84.324 -58.423 -34.991 0.50 68.74 O
ATOM 17 N3 U B 7 -82.881 -59.216 -36.558 0.50 68.63 N
ATOM 18 C4 U B 7 -81.809 -59.973 -36.990 0.50 68.44 C
ATOM 19 O4 U B 7 -81.474 -59.931 -38.176 0.50 67.65 O
ATOM 20 C5 U B 7 -81.164 -60.732 -35.964 0.50 68.26 C
ATOM 21 C6 U B 7 -81.610 -60.658 -34.706 0.50 68.42 C
ATOM 22 P A B 8 -85.173 -60.127 -28.775 0.50 65.04 P
ATOM 23 OP1 A B 8 -84.093 -60.940 -28.161 0.50 64.66 O
ATOM 24 OP2 A B 8 -86.557 -60.659 -28.821 0.50 64.61 O
ATOM 25 O5' A B 8 -85.216 -58.717 -28.039 0.50 63.71 O
TER
Atoms:
OP1: (-76.686,-59.431,-42.213)
OP2: (-78.386,-57.632,-41.554)
C3': (-77.116,-60.348,-37.198)
C1': (-77.251,-58.272,-36.073)
C5': (-75.881,-59.340,-39.221)
O4': (-76.426,-58.112,-37.214)
C8: (-78.967,-57.003,-37.476)
O2': (-76.473,-60.189,-34.843)
C6: (-81.662,-56.379,-35.305)
C5: (-80.515,-56.705,-36.050)
C4: (-79.520,-57.406,-35.394)
P: (-77.095,-58.325,-41.318)
C4': (-76.035,-59.415,-37.718)
C2': (-77.406,-59.772,-35.818)
C2: (-80.665,-57.455,-33.515)
N1: (-81.708,-56.778,-34.013)
N3: (-79.532,-57.817,-34.113)
N6: (-82.700,-55.701,-35.802)
N7: (-80.154,-56.457,-37.368)
N9: (-78.521,-57.591,-36.317)
O5': (-77.086,-58.872,-39.821)
O3': (-76.615,-61.673,-37.091)
OP2: (-78.386,-57.632,-41.554)
C3': (-77.116,-60.348,-37.198)
C1': (-77.251,-58.272,-36.073)
C5': (-75.881,-59.340,-39.221)
O4': (-76.426,-58.112,-37.214)
C8: (-78.967,-57.003,-37.476)
O2': (-76.473,-60.189,-34.843)
C6: (-81.662,-56.379,-35.305)
C5: (-80.515,-56.705,-36.050)
C4: (-79.520,-57.406,-35.394)
P: (-77.095,-58.325,-41.318)
C4': (-76.035,-59.415,-37.718)
C2': (-77.406,-59.772,-35.818)
C2: (-80.665,-57.455,-33.515)
N1: (-81.708,-56.778,-34.013)
N3: (-79.532,-57.817,-34.113)
N6: (-82.700,-55.701,-35.802)
N7: (-80.154,-56.457,-37.368)
N9: (-78.521,-57.591,-36.317)
O5': (-77.086,-58.872,-39.821)
O3': (-76.615,-61.673,-37.091)
C4: (-81.809,-59.973,-36.990)
N3: (-82.881,-59.216,-36.558)
OP1: (-80.575,-64.731,-29.619)
OP2: (-81.094,-64.860,-32.131)
C2: (-83.364,-59.121,-35.275)
C1': (-83.114,-59.797,-32.937)
C3': (-84.331,-60.793,-31.164)
O5': (-81.086,-62.687,-30.940)
O4': (-82.181,-60.512,-32.158)
C5': (-82.492,-62.510,-30.890)
P: (-80.473,-64.152,-30.983)
C4': (-82.839,-61.051,-30.983)
C2': (-84.463,-60.453,-32.648)
O2': (-85.539,-59.577,-32.923)
N1: (-82.678,-59.872,-34.339)
O4: (-81.474,-59.931,-38.176)
O2: (-84.324,-58.423,-34.991)
C6: (-81.610,-60.658,-34.706)
C5: (-81.164,-60.732,-35.964)
O3': (-84.742,-59.760,-30.278)
N3: (-82.881,-59.216,-36.558)
OP1: (-80.575,-64.731,-29.619)
OP2: (-81.094,-64.860,-32.131)
C2: (-83.364,-59.121,-35.275)
C1': (-83.114,-59.797,-32.937)
C3': (-84.331,-60.793,-31.164)
O5': (-81.086,-62.687,-30.940)
O4': (-82.181,-60.512,-32.158)
C5': (-82.492,-62.510,-30.890)
P: (-80.473,-64.152,-30.983)
C4': (-82.839,-61.051,-30.983)
C2': (-84.463,-60.453,-32.648)
O2': (-85.539,-59.577,-32.923)
N1: (-82.678,-59.872,-34.339)
O4: (-81.474,-59.931,-38.176)
O2: (-84.324,-58.423,-34.991)
C6: (-81.610,-60.658,-34.706)
C5: (-81.164,-60.732,-35.964)
O3': (-84.742,-59.760,-30.278)
Image (generated by PyMOL):