Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0533:0534
Extra
PDB:
ATOM 1 O3' G A 532 4.787 126.516 101.855 1.00 56.82 O
ATOM 2 P G A 533 4.104 127.548 100.833 1.00 57.79 P
ATOM 3 OP1 G A 533 2.646 127.449 101.085 1.00 59.91 O
ATOM 4 OP2 G A 533 4.631 127.314 99.464 1.00 53.68 O
ATOM 5 O5' G A 533 4.638 128.961 101.331 1.00 55.01 O
ATOM 6 C5' G A 533 6.018 129.108 101.648 1.00 53.88 C
ATOM 7 C4' G A 533 6.325 130.483 102.161 1.00 52.79 C
ATOM 8 O4' G A 533 7.759 130.504 102.372 1.00 52.97 O
ATOM 9 C3' G A 533 6.034 131.615 101.184 1.00 53.98 C
ATOM 10 O3' G A 533 4.796 132.249 101.488 1.00 56.30 O
ATOM 11 C2' G A 533 7.248 132.527 101.331 1.00 53.33 C
ATOM 12 O2' G A 533 7.195 133.402 102.446 1.00 51.33 O
ATOM 13 C1' G A 533 8.347 131.492 101.556 1.00 51.41 C
ATOM 14 N9 G A 533 8.823 130.852 100.328 1.00 48.08 N
ATOM 15 C8 G A 533 8.366 129.691 99.739 1.00 45.44 C
ATOM 16 N7 G A 533 8.999 129.392 98.636 1.00 43.78 N
ATOM 17 C5 G A 533 9.931 130.414 98.491 1.00 45.27 C
ATOM 18 C6 G A 533 10.905 130.644 97.481 1.00 43.94 C
ATOM 19 O6 G A 533 11.160 129.965 96.479 1.00 45.00 O
ATOM 20 N1 G A 533 11.624 131.803 97.725 1.00 42.73 N
ATOM 21 C2 G A 533 11.442 132.637 98.796 1.00 43.32 C
ATOM 22 N2 G A 533 12.236 133.712 98.855 1.00 45.42 N
ATOM 23 N3 G A 533 10.549 132.437 99.740 1.00 43.46 N
ATOM 24 C4 G A 533 9.833 131.318 99.528 1.00 45.62 C
ATOM 25 P C A 534 3.939 132.942 100.318 1.00 56.17 P
ATOM 26 OP1 C A 534 2.858 133.707 100.987 1.00 58.43 O
ATOM 27 OP2 C A 534 3.593 131.907 99.303 1.00 56.15 O
ATOM 28 O5' C A 534 4.937 133.997 99.667 1.00 56.61 O
TER
ATOM 1 O3' G B 533 4.796 132.249 101.488 1.00 56.30 O
ATOM 2 P C B 534 3.939 132.942 100.318 1.00 56.17 P
ATOM 3 OP1 C B 534 2.858 133.707 100.987 1.00 58.43 O
ATOM 4 OP2 C B 534 3.593 131.907 99.303 1.00 56.15 O
ATOM 5 O5' C B 534 4.937 133.997 99.667 1.00 56.61 O
ATOM 6 C5' C B 534 5.333 135.183 100.380 1.00 55.95 C
ATOM 7 C4' C B 534 6.427 135.901 99.623 1.00 58.57 C
ATOM 8 O4' C B 534 7.596 135.038 99.527 1.00 58.71 O
ATOM 9 C3' C B 534 6.118 136.253 98.174 1.00 59.15 C
ATOM 10 O3' C B 534 5.346 137.445 98.044 1.00 60.26 O
ATOM 11 C2' C B 534 7.514 136.402 97.584 1.00 59.00 C
ATOM 12 O2' C B 534 8.138 137.625 97.925 1.00 60.31 O
ATOM 13 C1' C B 534 8.252 135.260 98.285 1.00 57.29 C
ATOM 14 N1 C B 534 8.219 134.014 97.493 1.00 55.18 N
ATOM 15 C2 C B 534 9.176 133.833 96.475 1.00 54.22 C
ATOM 16 O2 C B 534 10.029 134.721 96.279 1.00 53.99 O
ATOM 17 N3 C B 534 9.145 132.701 95.733 1.00 51.95 N
ATOM 18 C4 C B 534 8.217 131.773 95.972 1.00 52.18 C
ATOM 19 N4 C B 534 8.224 130.674 95.214 1.00 52.15 N
ATOM 20 C5 C B 534 7.239 131.928 96.999 1.00 53.40 C
ATOM 21 C6 C B 534 7.277 133.050 97.728 1.00 53.43 C
ATOM 22 P A B 535 4.421 137.662 96.740 1.00 61.85 P
ATOM 23 OP1 A B 535 3.857 139.034 96.850 1.00 60.43 O
ATOM 24 OP2 A B 535 3.505 136.494 96.596 1.00 58.68 O
ATOM 25 O5' A B 535 5.440 137.644 95.512 1.00 59.72 O
TER
ATOM 2 P G A 533 4.104 127.548 100.833 1.00 57.79 P
ATOM 3 OP1 G A 533 2.646 127.449 101.085 1.00 59.91 O
ATOM 4 OP2 G A 533 4.631 127.314 99.464 1.00 53.68 O
ATOM 5 O5' G A 533 4.638 128.961 101.331 1.00 55.01 O
ATOM 6 C5' G A 533 6.018 129.108 101.648 1.00 53.88 C
ATOM 7 C4' G A 533 6.325 130.483 102.161 1.00 52.79 C
ATOM 8 O4' G A 533 7.759 130.504 102.372 1.00 52.97 O
ATOM 9 C3' G A 533 6.034 131.615 101.184 1.00 53.98 C
ATOM 10 O3' G A 533 4.796 132.249 101.488 1.00 56.30 O
ATOM 11 C2' G A 533 7.248 132.527 101.331 1.00 53.33 C
ATOM 12 O2' G A 533 7.195 133.402 102.446 1.00 51.33 O
ATOM 13 C1' G A 533 8.347 131.492 101.556 1.00 51.41 C
ATOM 14 N9 G A 533 8.823 130.852 100.328 1.00 48.08 N
ATOM 15 C8 G A 533 8.366 129.691 99.739 1.00 45.44 C
ATOM 16 N7 G A 533 8.999 129.392 98.636 1.00 43.78 N
ATOM 17 C5 G A 533 9.931 130.414 98.491 1.00 45.27 C
ATOM 18 C6 G A 533 10.905 130.644 97.481 1.00 43.94 C
ATOM 19 O6 G A 533 11.160 129.965 96.479 1.00 45.00 O
ATOM 20 N1 G A 533 11.624 131.803 97.725 1.00 42.73 N
ATOM 21 C2 G A 533 11.442 132.637 98.796 1.00 43.32 C
ATOM 22 N2 G A 533 12.236 133.712 98.855 1.00 45.42 N
ATOM 23 N3 G A 533 10.549 132.437 99.740 1.00 43.46 N
ATOM 24 C4 G A 533 9.833 131.318 99.528 1.00 45.62 C
ATOM 25 P C A 534 3.939 132.942 100.318 1.00 56.17 P
ATOM 26 OP1 C A 534 2.858 133.707 100.987 1.00 58.43 O
ATOM 27 OP2 C A 534 3.593 131.907 99.303 1.00 56.15 O
ATOM 28 O5' C A 534 4.937 133.997 99.667 1.00 56.61 O
TER
ATOM 1 O3' G B 533 4.796 132.249 101.488 1.00 56.30 O
ATOM 2 P C B 534 3.939 132.942 100.318 1.00 56.17 P
ATOM 3 OP1 C B 534 2.858 133.707 100.987 1.00 58.43 O
ATOM 4 OP2 C B 534 3.593 131.907 99.303 1.00 56.15 O
ATOM 5 O5' C B 534 4.937 133.997 99.667 1.00 56.61 O
ATOM 6 C5' C B 534 5.333 135.183 100.380 1.00 55.95 C
ATOM 7 C4' C B 534 6.427 135.901 99.623 1.00 58.57 C
ATOM 8 O4' C B 534 7.596 135.038 99.527 1.00 58.71 O
ATOM 9 C3' C B 534 6.118 136.253 98.174 1.00 59.15 C
ATOM 10 O3' C B 534 5.346 137.445 98.044 1.00 60.26 O
ATOM 11 C2' C B 534 7.514 136.402 97.584 1.00 59.00 C
ATOM 12 O2' C B 534 8.138 137.625 97.925 1.00 60.31 O
ATOM 13 C1' C B 534 8.252 135.260 98.285 1.00 57.29 C
ATOM 14 N1 C B 534 8.219 134.014 97.493 1.00 55.18 N
ATOM 15 C2 C B 534 9.176 133.833 96.475 1.00 54.22 C
ATOM 16 O2 C B 534 10.029 134.721 96.279 1.00 53.99 O
ATOM 17 N3 C B 534 9.145 132.701 95.733 1.00 51.95 N
ATOM 18 C4 C B 534 8.217 131.773 95.972 1.00 52.18 C
ATOM 19 N4 C B 534 8.224 130.674 95.214 1.00 52.15 N
ATOM 20 C5 C B 534 7.239 131.928 96.999 1.00 53.40 C
ATOM 21 C6 C B 534 7.277 133.050 97.728 1.00 53.43 C
ATOM 22 P A B 535 4.421 137.662 96.740 1.00 61.85 P
ATOM 23 OP1 A B 535 3.857 139.034 96.850 1.00 60.43 O
ATOM 24 OP2 A B 535 3.505 136.494 96.596 1.00 58.68 O
ATOM 25 O5' A B 535 5.440 137.644 95.512 1.00 59.72 O
TER
Atoms:
OP1: (2.646,127.449,101.085)
OP2: (4.631,127.314,99.464)
C3': (6.034,131.615,101.184)
C1': (8.347,131.492,101.556)
C5': (6.018,129.108,101.648)
O6: (11.160,129.965,96.479)
O4': (7.759,130.504,102.372)
C8: (8.366,129.691,99.739)
C2: (11.442,132.637,98.796)
C6: (10.905,130.644,97.481)
C5: (9.931,130.414,98.491)
C4: (9.833,131.318,99.528)
P: (4.104,127.548,100.833)
C4': (6.325,130.483,102.161)
C2': (7.248,132.527,101.331)
O2': (7.195,133.402,102.446)
N1: (11.624,131.803,97.725)
N2: (12.236,133.712,98.855)
N3: (10.549,132.437,99.740)
N7: (8.999,129.392,98.636)
N9: (8.823,130.852,100.328)
O5': (4.638,128.961,101.331)
O3': (4.796,132.249,101.488)
OP2: (4.631,127.314,99.464)
C3': (6.034,131.615,101.184)
C1': (8.347,131.492,101.556)
C5': (6.018,129.108,101.648)
O6: (11.160,129.965,96.479)
O4': (7.759,130.504,102.372)
C8: (8.366,129.691,99.739)
C2: (11.442,132.637,98.796)
C6: (10.905,130.644,97.481)
C5: (9.931,130.414,98.491)
C4: (9.833,131.318,99.528)
P: (4.104,127.548,100.833)
C4': (6.325,130.483,102.161)
C2': (7.248,132.527,101.331)
O2': (7.195,133.402,102.446)
N1: (11.624,131.803,97.725)
N2: (12.236,133.712,98.855)
N3: (10.549,132.437,99.740)
N7: (8.999,129.392,98.636)
N9: (8.823,130.852,100.328)
O5': (4.638,128.961,101.331)
O3': (4.796,132.249,101.488)
C2: (9.176,133.833,96.475)
OP1: (2.858,133.707,100.987)
OP2: (3.593,131.907,99.303)
C4: (8.217,131.773,95.972)
O5': (4.937,133.997,99.667)
C3': (6.118,136.253,98.174)
C1': (8.252,135.260,98.285)
O4': (7.596,135.038,99.527)
C5': (5.333,135.183,100.380)
P: (3.939,132.942,100.318)
O2: (10.029,134.721,96.279)
C4': (6.427,135.901,99.623)
C2': (7.514,136.402,97.584)
O2': (8.138,137.625,97.925)
N1: (8.219,134.014,97.493)
N3: (9.145,132.701,95.733)
N4: (8.224,130.674,95.214)
C6: (7.277,133.050,97.728)
C5: (7.239,131.928,96.999)
O3': (5.346,137.445,98.044)
OP1: (2.858,133.707,100.987)
OP2: (3.593,131.907,99.303)
C4: (8.217,131.773,95.972)
O5': (4.937,133.997,99.667)
C3': (6.118,136.253,98.174)
C1': (8.252,135.260,98.285)
O4': (7.596,135.038,99.527)
C5': (5.333,135.183,100.380)
P: (3.939,132.942,100.318)
O2: (10.029,134.721,96.279)
C4': (6.427,135.901,99.623)
C2': (7.514,136.402,97.584)
O2': (8.138,137.625,97.925)
N1: (8.219,134.014,97.493)
N3: (9.145,132.701,95.733)
N4: (8.224,130.674,95.214)
C6: (7.277,133.050,97.728)
C5: (7.239,131.928,96.999)
O3': (5.346,137.445,98.044)
Image (generated by PyMOL):