Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11903:11904
Extra
PDB:
ATOM 1 O3' G A1902 -16.288 76.331 128.025 1.00245.05 O
ATOM 2 P A A1903 -15.092 76.463 126.948 1.00201.23 P
ATOM 3 OP1 A A1903 -14.876 77.913 126.706 1.00201.93 O
ATOM 4 OP2 A A1903 -15.437 75.593 125.796 1.00200.39 O
ATOM 5 O5' A A1903 -13.846 75.857 127.727 1.00200.87 O
ATOM 6 C5' A A1903 -13.317 76.501 128.877 1.00201.56 C
ATOM 7 C4' A A1903 -12.220 75.679 129.502 1.00201.07 C
ATOM 8 O4' A A1903 -12.789 74.471 130.083 1.00200.75 O
ATOM 9 C3' A A1903 -11.159 75.153 128.543 1.00200.15 C
ATOM 10 O3' A A1903 -10.165 76.105 128.211 1.00200.34 O
ATOM 11 C2' A A1903 -10.632 73.935 129.280 1.00199.63 C
ATOM 12 O2' A A1903 -9.808 74.326 130.373 1.00200.10 O
ATOM 13 C1' A A1903 -11.935 73.369 129.837 1.00199.83 C
ATOM 14 N9 A A1903 -12.601 72.467 128.864 1.00199.11 N
ATOM 15 C8 A A1903 -13.433 72.816 127.819 1.00199.10 C
ATOM 16 N7 A A1903 -13.878 71.809 127.104 1.00198.38 N
ATOM 17 C5 A A1903 -13.300 70.705 127.712 1.00197.87 C
ATOM 18 C6 A A1903 -13.385 69.329 127.424 1.00197.05 C
ATOM 19 N6 A A1903 -14.105 68.822 126.422 1.00196.58 N
ATOM 20 N1 A A1903 -12.692 68.485 128.217 1.00196.74 N
ATOM 21 C2 A A1903 -11.968 69.003 129.222 1.00197.23 C
ATOM 22 N3 A A1903 -11.809 70.272 129.597 1.00198.02 N
ATOM 23 C4 A A1903 -12.509 71.090 128.790 1.00198.31 C
ATOM 24 P U A1904 -9.538 76.120 126.730 1.00224.40 P
ATOM 25 OP1 U A1904 -8.791 77.394 126.583 1.00224.92 O
ATOM 26 OP2 U A1904 -10.644 75.828 125.785 1.00224.13 O
ATOM 27 O5' U A1904 -8.517 74.899 126.766 1.00223.50 O
TER
ATOM 1 O3' A B1903 -10.165 76.105 128.211 1.00200.34 O
ATOM 2 P U B1904 -9.538 76.120 126.730 1.00224.40 P
ATOM 3 OP1 U B1904 -8.791 77.394 126.583 1.00224.92 O
ATOM 4 OP2 U B1904 -10.644 75.828 125.785 1.00224.13 O
ATOM 5 O5' U B1904 -8.517 74.899 126.766 1.00223.50 O
ATOM 6 C5' U B1904 -7.391 74.920 127.631 1.00223.60 C
ATOM 7 C4' U B1904 -6.848 73.534 127.875 1.00222.80 C
ATOM 8 O4' U B1904 -7.925 72.647 128.293 1.00222.70 O
ATOM 9 C3' U B1904 -6.264 72.823 126.669 1.00221.83 C
ATOM 10 O3' U B1904 -4.968 73.259 126.316 1.00221.67 O
ATOM 11 C2' U B1904 -6.337 71.370 127.101 1.00221.21 C
ATOM 12 O2' U B1904 -5.367 71.095 128.104 1.00221.25 O
ATOM 13 C1' U B1904 -7.714 71.355 127.752 1.00221.74 C
ATOM 14 N1 U B1904 -8.780 71.079 126.752 1.00221.44 N
ATOM 15 C2 U B1904 -9.138 69.759 126.552 1.00220.74 C
ATOM 16 O2 U B1904 -8.638 68.838 127.183 1.00220.38 O
ATOM 17 N3 U B1904 -10.115 69.571 125.596 1.00220.50 N
ATOM 18 C4 U B1904 -10.749 70.535 124.826 1.00220.88 C
ATOM 19 O4 U B1904 -11.608 70.212 124.006 1.00220.60 O
ATOM 20 C5 U B1904 -10.314 71.869 125.080 1.00221.59 C
ATOM 21 C6 U B1904 -9.373 72.079 126.003 1.00221.83 C
ATOM 22 P C B1905 -4.520 73.228 124.773 1.00168.05 P
ATOM 23 OP1 C B1905 -3.510 74.307 124.584 1.00168.38 O
ATOM 24 OP2 C B1905 -5.766 73.265 123.961 1.00168.03 O
ATOM 25 O5' C B1905 -3.825 71.794 124.637 1.00167.08 O
TER
ATOM 2 P A A1903 -15.092 76.463 126.948 1.00201.23 P
ATOM 3 OP1 A A1903 -14.876 77.913 126.706 1.00201.93 O
ATOM 4 OP2 A A1903 -15.437 75.593 125.796 1.00200.39 O
ATOM 5 O5' A A1903 -13.846 75.857 127.727 1.00200.87 O
ATOM 6 C5' A A1903 -13.317 76.501 128.877 1.00201.56 C
ATOM 7 C4' A A1903 -12.220 75.679 129.502 1.00201.07 C
ATOM 8 O4' A A1903 -12.789 74.471 130.083 1.00200.75 O
ATOM 9 C3' A A1903 -11.159 75.153 128.543 1.00200.15 C
ATOM 10 O3' A A1903 -10.165 76.105 128.211 1.00200.34 O
ATOM 11 C2' A A1903 -10.632 73.935 129.280 1.00199.63 C
ATOM 12 O2' A A1903 -9.808 74.326 130.373 1.00200.10 O
ATOM 13 C1' A A1903 -11.935 73.369 129.837 1.00199.83 C
ATOM 14 N9 A A1903 -12.601 72.467 128.864 1.00199.11 N
ATOM 15 C8 A A1903 -13.433 72.816 127.819 1.00199.10 C
ATOM 16 N7 A A1903 -13.878 71.809 127.104 1.00198.38 N
ATOM 17 C5 A A1903 -13.300 70.705 127.712 1.00197.87 C
ATOM 18 C6 A A1903 -13.385 69.329 127.424 1.00197.05 C
ATOM 19 N6 A A1903 -14.105 68.822 126.422 1.00196.58 N
ATOM 20 N1 A A1903 -12.692 68.485 128.217 1.00196.74 N
ATOM 21 C2 A A1903 -11.968 69.003 129.222 1.00197.23 C
ATOM 22 N3 A A1903 -11.809 70.272 129.597 1.00198.02 N
ATOM 23 C4 A A1903 -12.509 71.090 128.790 1.00198.31 C
ATOM 24 P U A1904 -9.538 76.120 126.730 1.00224.40 P
ATOM 25 OP1 U A1904 -8.791 77.394 126.583 1.00224.92 O
ATOM 26 OP2 U A1904 -10.644 75.828 125.785 1.00224.13 O
ATOM 27 O5' U A1904 -8.517 74.899 126.766 1.00223.50 O
TER
ATOM 1 O3' A B1903 -10.165 76.105 128.211 1.00200.34 O
ATOM 2 P U B1904 -9.538 76.120 126.730 1.00224.40 P
ATOM 3 OP1 U B1904 -8.791 77.394 126.583 1.00224.92 O
ATOM 4 OP2 U B1904 -10.644 75.828 125.785 1.00224.13 O
ATOM 5 O5' U B1904 -8.517 74.899 126.766 1.00223.50 O
ATOM 6 C5' U B1904 -7.391 74.920 127.631 1.00223.60 C
ATOM 7 C4' U B1904 -6.848 73.534 127.875 1.00222.80 C
ATOM 8 O4' U B1904 -7.925 72.647 128.293 1.00222.70 O
ATOM 9 C3' U B1904 -6.264 72.823 126.669 1.00221.83 C
ATOM 10 O3' U B1904 -4.968 73.259 126.316 1.00221.67 O
ATOM 11 C2' U B1904 -6.337 71.370 127.101 1.00221.21 C
ATOM 12 O2' U B1904 -5.367 71.095 128.104 1.00221.25 O
ATOM 13 C1' U B1904 -7.714 71.355 127.752 1.00221.74 C
ATOM 14 N1 U B1904 -8.780 71.079 126.752 1.00221.44 N
ATOM 15 C2 U B1904 -9.138 69.759 126.552 1.00220.74 C
ATOM 16 O2 U B1904 -8.638 68.838 127.183 1.00220.38 O
ATOM 17 N3 U B1904 -10.115 69.571 125.596 1.00220.50 N
ATOM 18 C4 U B1904 -10.749 70.535 124.826 1.00220.88 C
ATOM 19 O4 U B1904 -11.608 70.212 124.006 1.00220.60 O
ATOM 20 C5 U B1904 -10.314 71.869 125.080 1.00221.59 C
ATOM 21 C6 U B1904 -9.373 72.079 126.003 1.00221.83 C
ATOM 22 P C B1905 -4.520 73.228 124.773 1.00168.05 P
ATOM 23 OP1 C B1905 -3.510 74.307 124.584 1.00168.38 O
ATOM 24 OP2 C B1905 -5.766 73.265 123.961 1.00168.03 O
ATOM 25 O5' C B1905 -3.825 71.794 124.637 1.00167.08 O
TER
Atoms:
OP1: (-14.876,77.913,126.706)
OP2: (-15.437,75.593,125.796)
C3': (-11.159,75.153,128.543)
C1': (-11.935,73.369,129.837)
C5': (-13.317,76.501,128.877)
O4': (-12.789,74.471,130.083)
C8: (-13.433,72.816,127.819)
O2': (-9.808,74.326,130.373)
C6: (-13.385,69.329,127.424)
C5: (-13.300,70.705,127.712)
C4: (-12.509,71.090,128.790)
P: (-15.092,76.463,126.948)
C4': (-12.220,75.679,129.502)
C2': (-10.632,73.935,129.280)
C2: (-11.968,69.003,129.222)
N1: (-12.692,68.485,128.217)
N3: (-11.809,70.272,129.597)
N6: (-14.105,68.822,126.422)
N7: (-13.878,71.809,127.104)
N9: (-12.601,72.467,128.864)
O5': (-13.846,75.857,127.727)
O3': (-10.165,76.105,128.211)
OP2: (-15.437,75.593,125.796)
C3': (-11.159,75.153,128.543)
C1': (-11.935,73.369,129.837)
C5': (-13.317,76.501,128.877)
O4': (-12.789,74.471,130.083)
C8: (-13.433,72.816,127.819)
O2': (-9.808,74.326,130.373)
C6: (-13.385,69.329,127.424)
C5: (-13.300,70.705,127.712)
C4: (-12.509,71.090,128.790)
P: (-15.092,76.463,126.948)
C4': (-12.220,75.679,129.502)
C2': (-10.632,73.935,129.280)
C2: (-11.968,69.003,129.222)
N1: (-12.692,68.485,128.217)
N3: (-11.809,70.272,129.597)
N6: (-14.105,68.822,126.422)
N7: (-13.878,71.809,127.104)
N9: (-12.601,72.467,128.864)
O5': (-13.846,75.857,127.727)
O3': (-10.165,76.105,128.211)
C4: (-10.749,70.535,124.826)
N3: (-10.115,69.571,125.596)
OP1: (-8.791,77.394,126.583)
OP2: (-10.644,75.828,125.785)
C2: (-9.138,69.759,126.552)
C1': (-7.714,71.355,127.752)
C3': (-6.264,72.823,126.669)
O5': (-8.517,74.899,126.766)
O4': (-7.925,72.647,128.293)
C5': (-7.391,74.920,127.631)
P: (-9.538,76.120,126.730)
C4': (-6.848,73.534,127.875)
C2': (-6.337,71.370,127.101)
O2': (-5.367,71.095,128.104)
N1: (-8.780,71.079,126.752)
O4: (-11.608,70.212,124.006)
O2: (-8.638,68.838,127.183)
C6: (-9.373,72.079,126.003)
C5: (-10.314,71.869,125.080)
O3': (-4.968,73.259,126.316)
N3: (-10.115,69.571,125.596)
OP1: (-8.791,77.394,126.583)
OP2: (-10.644,75.828,125.785)
C2: (-9.138,69.759,126.552)
C1': (-7.714,71.355,127.752)
C3': (-6.264,72.823,126.669)
O5': (-8.517,74.899,126.766)
O4': (-7.925,72.647,128.293)
C5': (-7.391,74.920,127.631)
P: (-9.538,76.120,126.730)
C4': (-6.848,73.534,127.875)
C2': (-6.337,71.370,127.101)
O2': (-5.367,71.095,128.104)
N1: (-8.780,71.079,126.752)
O4: (-11.608,70.212,124.006)
O2: (-8.638,68.838,127.183)
C6: (-9.373,72.079,126.003)
C5: (-10.314,71.869,125.080)
O3': (-4.968,73.259,126.316)
Image (generated by PyMOL):