ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CUL:D29:D30

Extra

PDB:
ATOM 1 O3' C A 28 -6.580 -9.834 -12.366 1.00117.60 O
ATOM 2 P A A 29 -5.581 -8.649 -11.946 1.00118.75 P
ATOM 3 OP1 A A 29 -4.598 -9.201 -10.981 1.00116.59 O
ATOM 4 OP2 A A 29 -6.419 -7.482 -11.551 1.00113.62 O
ATOM 5 O5' A A 29 -4.812 -8.323 -13.308 1.00118.43 O
ATOM 6 C5' A A 29 -4.210 -9.370 -14.075 1.00117.27 C
ATOM 7 C4' A A 29 -3.997 -8.934 -15.511 1.00117.28 C
ATOM 8 O4' A A 29 -5.274 -8.720 -16.170 1.00117.67 O
ATOM 9 C3' A A 29 -3.263 -7.620 -15.704 1.00117.48 C
ATOM 10 O3' A A 29 -1.858 -7.796 -15.620 1.00117.09 O
ATOM 11 C2' A A 29 -3.695 -7.212 -17.106 1.00117.42 C
ATOM 12 O2' A A 29 -2.974 -7.875 -18.128 1.00115.55 O
ATOM 13 C1' A A 29 -5.158 -7.656 -17.108 1.00117.67 C
ATOM 14 N9 A A 29 -6.058 -6.576 -16.696 1.00119.79 N
ATOM 15 C8 A A 29 -6.548 -6.322 -15.435 1.00119.68 C
ATOM 16 N7 A A 29 -7.318 -5.260 -15.369 1.00119.76 N
ATOM 17 C5 A A 29 -7.341 -4.784 -16.675 1.00119.78 C
ATOM 18 C6 A A 29 -7.975 -3.675 -17.268 1.00117.83 C
ATOM 19 N6 A A 29 -8.735 -2.809 -16.599 1.00115.90 N
ATOM 20 N1 A A 29 -7.795 -3.483 -18.590 1.00118.06 N
ATOM 21 C2 A A 29 -7.025 -4.346 -19.262 1.00118.99 C
ATOM 22 N3 A A 29 -6.375 -5.421 -18.822 1.00119.61 N
ATOM 23 C4 A A 29 -6.575 -5.588 -17.504 1.00120.03 C
ATOM 24 P U A 30 -0.953 -6.623 -15.002 1.00117.77 P
ATOM 25 OP1 U A 30 0.460 -7.095 -14.987 1.00114.74 O
ATOM 26 OP2 U A 30 -1.605 -6.189 -13.732 1.00114.11 O
ATOM 27 O5' U A 30 -1.088 -5.431 -16.060 1.00117.95 O
TER

ATOM 1 O3' A B 29 -1.858 -7.796 -15.620 1.00117.09 O
ATOM 2 P U B 30 -0.953 -6.623 -15.002 1.00117.77 P
ATOM 3 OP1 U B 30 0.460 -7.095 -14.987 1.00114.74 O
ATOM 4 OP2 U B 30 -1.605 -6.189 -13.732 1.00114.11 O
ATOM 5 O5' U B 30 -1.088 -5.431 -16.060 1.00117.95 O
ATOM 6 C5' U B 30 -0.585 -5.573 -17.395 1.00114.92 C
ATOM 7 C4' U B 30 -0.963 -4.377 -18.256 1.00110.56 C
ATOM 8 O4' U B 30 -2.409 -4.282 -18.389 1.00110.85 O
ATOM 9 C3' U B 30 -0.575 -3.004 -17.747 1.00107.34 C
ATOM 10 O3' U B 30 0.792 -2.730 -18.008 1.00105.32 O
ATOM 11 C2' U B 30 -1.496 -2.098 -18.558 1.00106.42 C
ATOM 12 O2' U B 30 -1.035 -1.870 -19.873 1.00101.22 O
ATOM 13 C1' U B 30 -2.780 -2.929 -18.606 1.00107.00 C
ATOM 14 N1 U B 30 -3.751 -2.542 -17.573 1.00105.86 N
ATOM 15 C2 U B 30 -4.692 -1.586 -17.897 1.00104.25 C
ATOM 16 O2 U B 30 -4.750 -1.062 -18.996 1.00106.04 O
ATOM 17 N3 U B 30 -5.563 -1.265 -16.887 1.00101.36 N
ATOM 18 C4 U B 30 -5.583 -1.788 -15.614 1.00101.09 C
ATOM 19 O4 U B 30 -6.432 -1.402 -14.811 1.00 98.92 O
ATOM 20 C5 U B 30 -4.578 -2.768 -15.359 1.00102.93 C
ATOM 21 C6 U B 30 -3.720 -3.106 -16.325 1.00104.23 C
ATOM 22 P U B 31 1.630 -1.851 -16.956 1.00105.39 P
ATOM 23 OP1 U B 31 3.075 -1.943 -17.300 1.00101.72 O
ATOM 24 OP2 U B 31 1.165 -2.268 -15.608 1.00102.09 O
ATOM 25 O5' U B 31 1.115 -0.353 -17.177 1.00102.01 O
TER

Atoms:
OP1: (-4.598,-9.201,-10.981)
OP2: (-6.419,-7.482,-11.551)
C3': (-3.263,-7.620,-15.704)
C1': (-5.158,-7.656,-17.108)
C5': (-4.210,-9.370,-14.075)
O4': (-5.274,-8.720,-16.170)
C8: (-6.548,-6.322,-15.435)
O2': (-2.974,-7.875,-18.128)
C6: (-7.975,-3.675,-17.268)
C5: (-7.341,-4.784,-16.675)
C4: (-6.575,-5.588,-17.504)
P: (-5.581,-8.649,-11.946)
C4': (-3.997,-8.934,-15.511)
C2': (-3.695,-7.212,-17.106)
C2: (-7.025,-4.346,-19.262)
N1: (-7.795,-3.483,-18.590)
N3: (-6.375,-5.421,-18.822)
N6: (-8.735,-2.809,-16.599)
N7: (-7.318,-5.260,-15.369)
N9: (-6.058,-6.576,-16.696)
O5': (-4.812,-8.323,-13.308)
O3': (-1.858,-7.796,-15.620)
C4: (-5.583,-1.788,-15.614)
N3: (-5.563,-1.265,-16.887)
OP1: (0.460,-7.095,-14.987)
OP2: (-1.605,-6.189,-13.732)
C2: (-4.692,-1.586,-17.897)
C1': (-2.780,-2.929,-18.606)
C3': (-0.575,-3.004,-17.747)
O5': (-1.088,-5.431,-16.060)
O4': (-2.409,-4.282,-18.389)
C5': (-0.585,-5.573,-17.395)
P: (-0.953,-6.623,-15.002)
C4': (-0.963,-4.377,-18.256)
C2': (-1.496,-2.098,-18.558)
O2': (-1.035,-1.870,-19.873)
N1: (-3.751,-2.542,-17.573)
O4: (-6.432,-1.402,-14.811)
O2: (-4.750,-1.062,-18.996)
C6: (-3.720,-3.106,-16.325)
C5: (-4.578,-2.768,-15.359)
O3': (0.792,-2.730,-18.008)
Image (generated by PyMOL):
PyMOL image
show in jmol