Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X62:X63
Extra
PDB:
ATOM 1 O3' U A 61 5.779 -18.532 11.831 1.00 48.97 O
ATOM 2 P A A 62 5.986 -18.521 10.238 1.00 48.11 P
ATOM 3 OP1 A A 62 5.437 -19.788 9.710 1.00 48.94 O
ATOM 4 OP2 A A 62 7.383 -18.144 9.954 1.00 49.98 O
ATOM 5 O5' A A 62 5.059 -17.327 9.746 1.00 48.92 O
ATOM 6 C5' A A 62 3.648 -17.328 9.951 1.00 48.57 C
ATOM 7 C4' A A 62 3.113 -15.959 9.592 1.00 48.76 C
ATOM 8 O4' A A 62 3.727 -14.981 10.466 1.00 48.39 O
ATOM 9 C3' A A 62 3.500 -15.468 8.203 1.00 49.10 C
ATOM 10 O3' A A 62 2.633 -16.007 7.205 1.00 49.68 O
ATOM 11 C2' A A 62 3.347 -13.956 8.362 1.00 49.26 C
ATOM 12 O2' A A 62 1.999 -13.529 8.296 1.00 48.59 O
ATOM 13 C1' A A 62 3.895 -13.752 9.772 1.00 48.00 C
ATOM 14 N9 A A 62 5.306 -13.369 9.828 1.00 47.65 N
ATOM 15 C8 A A 62 6.362 -14.195 10.094 1.00 47.51 C
ATOM 16 N7 A A 62 7.527 -13.596 10.095 1.00 47.33 N
ATOM 17 C5 A A 62 7.217 -12.279 9.811 1.00 47.36 C
ATOM 18 C6 A A 62 8.014 -11.125 9.668 1.00 46.90 C
ATOM 19 N6 A A 62 9.334 -11.140 9.807 1.00 46.85 N
ATOM 20 N1 A A 62 7.399 -9.957 9.371 1.00 47.53 N
ATOM 21 C2 A A 62 6.067 -9.941 9.235 1.00 47.22 C
ATOM 22 N3 A A 62 5.219 -10.962 9.353 1.00 47.56 N
ATOM 23 C4 A A 62 5.853 -12.115 9.643 1.00 47.53 C
ATOM 24 P U A 63 3.134 -16.230 5.696 1.00 49.51 P
ATOM 25 OP1 U A 63 2.109 -17.053 5.017 1.00 50.11 O
ATOM 26 OP2 U A 63 4.542 -16.677 5.716 1.00 50.53 O
ATOM 27 O5' U A 63 3.110 -14.772 5.076 1.00 48.62 O
TER
ATOM 1 O3' A B 62 2.633 -16.007 7.205 1.00 49.68 O
ATOM 2 P U B 63 3.134 -16.230 5.696 1.00 49.51 P
ATOM 3 OP1 U B 63 2.109 -17.053 5.017 1.00 50.11 O
ATOM 4 OP2 U B 63 4.542 -16.677 5.716 1.00 50.53 O
ATOM 5 O5' U B 63 3.110 -14.772 5.076 1.00 48.62 O
ATOM 6 C5' U B 63 1.895 -14.131 4.782 1.00 48.12 C
ATOM 7 C4' U B 63 2.213 -12.719 4.352 1.00 48.22 C
ATOM 8 O4' U B 63 2.789 -11.988 5.469 1.00 48.34 O
ATOM 9 C3' U B 63 3.297 -12.607 3.293 1.00 48.35 C
ATOM 10 O3' U B 63 2.827 -12.985 2.011 1.00 47.61 O
ATOM 11 C2' U B 63 3.637 -11.129 3.450 1.00 48.87 C
ATOM 12 O2' U B 63 2.612 -10.270 3.002 1.00 49.35 O
ATOM 13 C1' U B 63 3.758 -11.079 4.972 1.00 49.04 C
ATOM 14 N1 U B 63 5.158 -11.414 5.474 1.00 49.60 N
ATOM 15 C2 U B 63 6.009 -10.358 5.728 1.00 49.07 C
ATOM 16 O2 U B 63 5.679 -9.198 5.569 1.00 49.08 O
ATOM 17 N3 U B 63 7.263 -10.708 6.174 1.00 49.02 N
ATOM 18 C4 U B 63 7.746 -11.995 6.378 1.00 49.54 C
ATOM 19 O4 U B 63 8.894 -12.150 6.783 1.00 49.61 O
ATOM 20 C5 U B 63 6.807 -13.056 6.096 1.00 48.83 C
ATOM 21 C6 U B 63 5.579 -12.730 5.660 1.00 48.67 C
ATOM 22 P G B 64 3.813 -13.618 0.916 1.00 46.96 P
ATOM 23 OP1 G B 64 2.983 -13.982 -0.256 1.00 46.01 O
ATOM 24 OP2 G B 64 4.688 -14.641 1.534 1.00 45.17 O
ATOM 25 O5' G B 64 4.701 -12.344 0.546 1.00 47.66 O
TER
ATOM 2 P A A 62 5.986 -18.521 10.238 1.00 48.11 P
ATOM 3 OP1 A A 62 5.437 -19.788 9.710 1.00 48.94 O
ATOM 4 OP2 A A 62 7.383 -18.144 9.954 1.00 49.98 O
ATOM 5 O5' A A 62 5.059 -17.327 9.746 1.00 48.92 O
ATOM 6 C5' A A 62 3.648 -17.328 9.951 1.00 48.57 C
ATOM 7 C4' A A 62 3.113 -15.959 9.592 1.00 48.76 C
ATOM 8 O4' A A 62 3.727 -14.981 10.466 1.00 48.39 O
ATOM 9 C3' A A 62 3.500 -15.468 8.203 1.00 49.10 C
ATOM 10 O3' A A 62 2.633 -16.007 7.205 1.00 49.68 O
ATOM 11 C2' A A 62 3.347 -13.956 8.362 1.00 49.26 C
ATOM 12 O2' A A 62 1.999 -13.529 8.296 1.00 48.59 O
ATOM 13 C1' A A 62 3.895 -13.752 9.772 1.00 48.00 C
ATOM 14 N9 A A 62 5.306 -13.369 9.828 1.00 47.65 N
ATOM 15 C8 A A 62 6.362 -14.195 10.094 1.00 47.51 C
ATOM 16 N7 A A 62 7.527 -13.596 10.095 1.00 47.33 N
ATOM 17 C5 A A 62 7.217 -12.279 9.811 1.00 47.36 C
ATOM 18 C6 A A 62 8.014 -11.125 9.668 1.00 46.90 C
ATOM 19 N6 A A 62 9.334 -11.140 9.807 1.00 46.85 N
ATOM 20 N1 A A 62 7.399 -9.957 9.371 1.00 47.53 N
ATOM 21 C2 A A 62 6.067 -9.941 9.235 1.00 47.22 C
ATOM 22 N3 A A 62 5.219 -10.962 9.353 1.00 47.56 N
ATOM 23 C4 A A 62 5.853 -12.115 9.643 1.00 47.53 C
ATOM 24 P U A 63 3.134 -16.230 5.696 1.00 49.51 P
ATOM 25 OP1 U A 63 2.109 -17.053 5.017 1.00 50.11 O
ATOM 26 OP2 U A 63 4.542 -16.677 5.716 1.00 50.53 O
ATOM 27 O5' U A 63 3.110 -14.772 5.076 1.00 48.62 O
TER
ATOM 1 O3' A B 62 2.633 -16.007 7.205 1.00 49.68 O
ATOM 2 P U B 63 3.134 -16.230 5.696 1.00 49.51 P
ATOM 3 OP1 U B 63 2.109 -17.053 5.017 1.00 50.11 O
ATOM 4 OP2 U B 63 4.542 -16.677 5.716 1.00 50.53 O
ATOM 5 O5' U B 63 3.110 -14.772 5.076 1.00 48.62 O
ATOM 6 C5' U B 63 1.895 -14.131 4.782 1.00 48.12 C
ATOM 7 C4' U B 63 2.213 -12.719 4.352 1.00 48.22 C
ATOM 8 O4' U B 63 2.789 -11.988 5.469 1.00 48.34 O
ATOM 9 C3' U B 63 3.297 -12.607 3.293 1.00 48.35 C
ATOM 10 O3' U B 63 2.827 -12.985 2.011 1.00 47.61 O
ATOM 11 C2' U B 63 3.637 -11.129 3.450 1.00 48.87 C
ATOM 12 O2' U B 63 2.612 -10.270 3.002 1.00 49.35 O
ATOM 13 C1' U B 63 3.758 -11.079 4.972 1.00 49.04 C
ATOM 14 N1 U B 63 5.158 -11.414 5.474 1.00 49.60 N
ATOM 15 C2 U B 63 6.009 -10.358 5.728 1.00 49.07 C
ATOM 16 O2 U B 63 5.679 -9.198 5.569 1.00 49.08 O
ATOM 17 N3 U B 63 7.263 -10.708 6.174 1.00 49.02 N
ATOM 18 C4 U B 63 7.746 -11.995 6.378 1.00 49.54 C
ATOM 19 O4 U B 63 8.894 -12.150 6.783 1.00 49.61 O
ATOM 20 C5 U B 63 6.807 -13.056 6.096 1.00 48.83 C
ATOM 21 C6 U B 63 5.579 -12.730 5.660 1.00 48.67 C
ATOM 22 P G B 64 3.813 -13.618 0.916 1.00 46.96 P
ATOM 23 OP1 G B 64 2.983 -13.982 -0.256 1.00 46.01 O
ATOM 24 OP2 G B 64 4.688 -14.641 1.534 1.00 45.17 O
ATOM 25 O5' G B 64 4.701 -12.344 0.546 1.00 47.66 O
TER
Atoms:
OP1: (5.437,-19.788,9.710)
OP2: (7.383,-18.144,9.954)
C3': (3.500,-15.468,8.203)
C1': (3.895,-13.752,9.772)
C5': (3.648,-17.328,9.951)
O4': (3.727,-14.981,10.466)
C8: (6.362,-14.195,10.094)
O2': (1.999,-13.529,8.296)
C6: (8.014,-11.125,9.668)
C5: (7.217,-12.279,9.811)
C4: (5.853,-12.115,9.643)
P: (5.986,-18.521,10.238)
C4': (3.113,-15.959,9.592)
C2': (3.347,-13.956,8.362)
C2: (6.067,-9.941,9.235)
N1: (7.399,-9.957,9.371)
N3: (5.219,-10.962,9.353)
N6: (9.334,-11.140,9.807)
N7: (7.527,-13.596,10.095)
N9: (5.306,-13.369,9.828)
O5': (5.059,-17.327,9.746)
O3': (2.633,-16.007,7.205)
OP2: (7.383,-18.144,9.954)
C3': (3.500,-15.468,8.203)
C1': (3.895,-13.752,9.772)
C5': (3.648,-17.328,9.951)
O4': (3.727,-14.981,10.466)
C8: (6.362,-14.195,10.094)
O2': (1.999,-13.529,8.296)
C6: (8.014,-11.125,9.668)
C5: (7.217,-12.279,9.811)
C4: (5.853,-12.115,9.643)
P: (5.986,-18.521,10.238)
C4': (3.113,-15.959,9.592)
C2': (3.347,-13.956,8.362)
C2: (6.067,-9.941,9.235)
N1: (7.399,-9.957,9.371)
N3: (5.219,-10.962,9.353)
N6: (9.334,-11.140,9.807)
N7: (7.527,-13.596,10.095)
N9: (5.306,-13.369,9.828)
O5': (5.059,-17.327,9.746)
O3': (2.633,-16.007,7.205)
C4: (7.746,-11.995,6.378)
N3: (7.263,-10.708,6.174)
OP1: (2.109,-17.053,5.017)
OP2: (4.542,-16.677,5.716)
C2: (6.009,-10.358,5.728)
C1': (3.758,-11.079,4.972)
C3': (3.297,-12.607,3.293)
O5': (3.110,-14.772,5.076)
O4': (2.789,-11.988,5.469)
C5': (1.895,-14.131,4.782)
P: (3.134,-16.230,5.696)
C4': (2.213,-12.719,4.352)
C2': (3.637,-11.129,3.450)
O2': (2.612,-10.270,3.002)
N1: (5.158,-11.414,5.474)
O4: (8.894,-12.150,6.783)
O2: (5.679,-9.198,5.569)
C6: (5.579,-12.730,5.660)
C5: (6.807,-13.056,6.096)
O3': (2.827,-12.985,2.011)
N3: (7.263,-10.708,6.174)
OP1: (2.109,-17.053,5.017)
OP2: (4.542,-16.677,5.716)
C2: (6.009,-10.358,5.728)
C1': (3.758,-11.079,4.972)
C3': (3.297,-12.607,3.293)
O5': (3.110,-14.772,5.076)
O4': (2.789,-11.988,5.469)
C5': (1.895,-14.131,4.782)
P: (3.134,-16.230,5.696)
C4': (2.213,-12.719,4.352)
C2': (3.637,-11.129,3.450)
O2': (2.612,-10.270,3.002)
N1: (5.158,-11.414,5.474)
O4: (8.894,-12.150,6.783)
O2: (5.679,-9.198,5.569)
C6: (5.579,-12.730,5.660)
C5: (6.807,-13.056,6.096)
O3': (2.827,-12.985,2.011)
Image (generated by PyMOL):