Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1:A2
Extra
PDB:
ATOM 1 P A A 1 20.715 148.755 101.510 1.00 75.17 P
ATOM 2 OP1 A A 1 20.296 149.045 100.120 1.00 75.99 O
ATOM 3 OP2 A A 1 21.221 147.405 101.848 1.00 74.16 O
ATOM 4 O5' A A 1 21.855 149.805 101.856 1.00 71.29 O
ATOM 5 C5' A A 1 23.187 149.628 101.375 1.00 65.24 C
ATOM 6 C4' A A 1 24.159 150.366 102.265 1.00 60.78 C
ATOM 7 O4' A A 1 23.937 149.996 103.648 1.00 59.72 O
ATOM 8 C3' A A 1 25.603 150.010 102.009 1.00 58.59 C
ATOM 9 O3' A A 1 26.077 150.755 100.913 1.00 56.36 O
ATOM 10 C2' A A 1 26.257 150.307 103.352 1.00 58.40 C
ATOM 11 O2' A A 1 26.431 151.689 103.584 1.00 59.53 O
ATOM 12 C1' A A 1 25.176 149.797 104.309 1.00 57.92 C
ATOM 13 N9 A A 1 25.272 148.367 104.617 1.00 57.21 N
ATOM 14 C8 A A 1 24.259 147.444 104.514 1.00 56.45 C
ATOM 15 N7 A A 1 24.616 146.222 104.828 1.00 55.94 N
ATOM 16 C5 A A 1 25.954 146.345 105.171 1.00 56.39 C
ATOM 17 C6 A A 1 26.903 145.405 105.596 1.00 56.10 C
ATOM 18 N6 A A 1 26.635 144.106 105.756 1.00 57.00 N
ATOM 19 N1 A A 1 28.150 145.847 105.853 1.00 56.18 N
ATOM 20 C2 A A 1 28.417 147.151 105.691 1.00 56.79 C
ATOM 21 N3 A A 1 27.608 148.139 105.299 1.00 57.00 N
ATOM 22 C4 A A 1 26.373 147.663 105.050 1.00 57.12 C
ATOM 23 P U A 2 26.236 150.040 99.486 1.00 58.59 P
ATOM 24 OP1 U A 2 26.591 151.117 98.527 1.00 59.61 O
ATOM 25 OP2 U A 2 25.047 149.168 99.213 1.00 58.54 O
ATOM 26 O5' U A 2 27.520 149.118 99.684 1.00 56.80 O
TER
ATOM 1 O3' A B 1 26.077 150.755 100.913 1.00 56.36 O
ATOM 2 P U B 2 26.236 150.040 99.486 1.00 58.59 P
ATOM 3 OP1 U B 2 26.591 151.117 98.527 1.00 59.61 O
ATOM 4 OP2 U B 2 25.047 149.168 99.213 1.00 58.54 O
ATOM 5 O5' U B 2 27.520 149.118 99.684 1.00 56.80 O
ATOM 6 C5' U B 2 28.783 149.711 100.018 1.00 54.34 C
ATOM 7 C4' U B 2 29.717 148.690 100.605 1.00 52.52 C
ATOM 8 O4' U B 2 29.226 148.241 101.892 1.00 52.85 O
ATOM 9 C3' U B 2 29.832 147.408 99.811 1.00 51.89 C
ATOM 10 O3' U B 2 30.672 147.498 98.689 1.00 50.54 O
ATOM 11 C2' U B 2 30.354 146.425 100.839 1.00 52.75 C
ATOM 12 O2' U B 2 31.757 146.470 101.042 1.00 52.62 O
ATOM 13 C1' U B 2 29.575 146.870 102.077 1.00 52.34 C
ATOM 14 N1 U B 2 28.350 146.064 102.198 1.00 52.33 N
ATOM 15 C2 U B 2 28.493 144.767 102.668 1.00 53.39 C
ATOM 16 O2 U B 2 29.577 144.283 102.989 1.00 55.72 O
ATOM 17 N3 U B 2 27.329 144.047 102.739 1.00 52.72 N
ATOM 18 C4 U B 2 26.068 144.470 102.386 1.00 52.44 C
ATOM 19 O4 U B 2 25.132 143.672 102.425 1.00 53.51 O
ATOM 20 C5 U B 2 26.002 145.821 101.918 1.00 51.89 C
ATOM 21 C6 U B 2 27.115 146.553 101.845 1.00 51.01 C
ATOM 22 P G B 3 30.143 146.960 97.282 1.00 50.16 P
ATOM 23 OP1 G B 3 31.328 146.681 96.455 1.00 50.16 O
ATOM 24 OP2 G B 3 29.125 147.944 96.820 1.00 52.58 O
ATOM 25 O5' G B 3 29.452 145.563 97.625 1.00 47.69 O
TER
ATOM 2 OP1 A A 1 20.296 149.045 100.120 1.00 75.99 O
ATOM 3 OP2 A A 1 21.221 147.405 101.848 1.00 74.16 O
ATOM 4 O5' A A 1 21.855 149.805 101.856 1.00 71.29 O
ATOM 5 C5' A A 1 23.187 149.628 101.375 1.00 65.24 C
ATOM 6 C4' A A 1 24.159 150.366 102.265 1.00 60.78 C
ATOM 7 O4' A A 1 23.937 149.996 103.648 1.00 59.72 O
ATOM 8 C3' A A 1 25.603 150.010 102.009 1.00 58.59 C
ATOM 9 O3' A A 1 26.077 150.755 100.913 1.00 56.36 O
ATOM 10 C2' A A 1 26.257 150.307 103.352 1.00 58.40 C
ATOM 11 O2' A A 1 26.431 151.689 103.584 1.00 59.53 O
ATOM 12 C1' A A 1 25.176 149.797 104.309 1.00 57.92 C
ATOM 13 N9 A A 1 25.272 148.367 104.617 1.00 57.21 N
ATOM 14 C8 A A 1 24.259 147.444 104.514 1.00 56.45 C
ATOM 15 N7 A A 1 24.616 146.222 104.828 1.00 55.94 N
ATOM 16 C5 A A 1 25.954 146.345 105.171 1.00 56.39 C
ATOM 17 C6 A A 1 26.903 145.405 105.596 1.00 56.10 C
ATOM 18 N6 A A 1 26.635 144.106 105.756 1.00 57.00 N
ATOM 19 N1 A A 1 28.150 145.847 105.853 1.00 56.18 N
ATOM 20 C2 A A 1 28.417 147.151 105.691 1.00 56.79 C
ATOM 21 N3 A A 1 27.608 148.139 105.299 1.00 57.00 N
ATOM 22 C4 A A 1 26.373 147.663 105.050 1.00 57.12 C
ATOM 23 P U A 2 26.236 150.040 99.486 1.00 58.59 P
ATOM 24 OP1 U A 2 26.591 151.117 98.527 1.00 59.61 O
ATOM 25 OP2 U A 2 25.047 149.168 99.213 1.00 58.54 O
ATOM 26 O5' U A 2 27.520 149.118 99.684 1.00 56.80 O
TER
ATOM 1 O3' A B 1 26.077 150.755 100.913 1.00 56.36 O
ATOM 2 P U B 2 26.236 150.040 99.486 1.00 58.59 P
ATOM 3 OP1 U B 2 26.591 151.117 98.527 1.00 59.61 O
ATOM 4 OP2 U B 2 25.047 149.168 99.213 1.00 58.54 O
ATOM 5 O5' U B 2 27.520 149.118 99.684 1.00 56.80 O
ATOM 6 C5' U B 2 28.783 149.711 100.018 1.00 54.34 C
ATOM 7 C4' U B 2 29.717 148.690 100.605 1.00 52.52 C
ATOM 8 O4' U B 2 29.226 148.241 101.892 1.00 52.85 O
ATOM 9 C3' U B 2 29.832 147.408 99.811 1.00 51.89 C
ATOM 10 O3' U B 2 30.672 147.498 98.689 1.00 50.54 O
ATOM 11 C2' U B 2 30.354 146.425 100.839 1.00 52.75 C
ATOM 12 O2' U B 2 31.757 146.470 101.042 1.00 52.62 O
ATOM 13 C1' U B 2 29.575 146.870 102.077 1.00 52.34 C
ATOM 14 N1 U B 2 28.350 146.064 102.198 1.00 52.33 N
ATOM 15 C2 U B 2 28.493 144.767 102.668 1.00 53.39 C
ATOM 16 O2 U B 2 29.577 144.283 102.989 1.00 55.72 O
ATOM 17 N3 U B 2 27.329 144.047 102.739 1.00 52.72 N
ATOM 18 C4 U B 2 26.068 144.470 102.386 1.00 52.44 C
ATOM 19 O4 U B 2 25.132 143.672 102.425 1.00 53.51 O
ATOM 20 C5 U B 2 26.002 145.821 101.918 1.00 51.89 C
ATOM 21 C6 U B 2 27.115 146.553 101.845 1.00 51.01 C
ATOM 22 P G B 3 30.143 146.960 97.282 1.00 50.16 P
ATOM 23 OP1 G B 3 31.328 146.681 96.455 1.00 50.16 O
ATOM 24 OP2 G B 3 29.125 147.944 96.820 1.00 52.58 O
ATOM 25 O5' G B 3 29.452 145.563 97.625 1.00 47.69 O
TER
Atoms:
OP1: (20.296,149.045,100.120)
OP2: (21.221,147.405,101.848)
C3': (25.603,150.010,102.009)
C1': (25.176,149.797,104.309)
C5': (23.187,149.628,101.375)
O4': (23.937,149.996,103.648)
C8: (24.259,147.444,104.514)
O2': (26.431,151.689,103.584)
C6: (26.903,145.405,105.596)
C5: (25.954,146.345,105.171)
C4: (26.373,147.663,105.050)
P: (20.715,148.755,101.510)
C4': (24.159,150.366,102.265)
C2': (26.257,150.307,103.352)
C2: (28.417,147.151,105.691)
N1: (28.150,145.847,105.853)
N3: (27.608,148.139,105.299)
N6: (26.635,144.106,105.756)
N7: (24.616,146.222,104.828)
N9: (25.272,148.367,104.617)
O5': (21.855,149.805,101.856)
O3': (26.077,150.755,100.913)
OP2: (21.221,147.405,101.848)
C3': (25.603,150.010,102.009)
C1': (25.176,149.797,104.309)
C5': (23.187,149.628,101.375)
O4': (23.937,149.996,103.648)
C8: (24.259,147.444,104.514)
O2': (26.431,151.689,103.584)
C6: (26.903,145.405,105.596)
C5: (25.954,146.345,105.171)
C4: (26.373,147.663,105.050)
P: (20.715,148.755,101.510)
C4': (24.159,150.366,102.265)
C2': (26.257,150.307,103.352)
C2: (28.417,147.151,105.691)
N1: (28.150,145.847,105.853)
N3: (27.608,148.139,105.299)
N6: (26.635,144.106,105.756)
N7: (24.616,146.222,104.828)
N9: (25.272,148.367,104.617)
O5': (21.855,149.805,101.856)
O3': (26.077,150.755,100.913)
C4: (26.068,144.470,102.386)
N3: (27.329,144.047,102.739)
OP1: (26.591,151.117,98.527)
OP2: (25.047,149.168,99.213)
C2: (28.493,144.767,102.668)
C1': (29.575,146.870,102.077)
C3': (29.832,147.408,99.811)
O5': (27.520,149.118,99.684)
O4': (29.226,148.241,101.892)
C5': (28.783,149.711,100.018)
P: (26.236,150.040,99.486)
C4': (29.717,148.690,100.605)
C2': (30.354,146.425,100.839)
O2': (31.757,146.470,101.042)
N1: (28.350,146.064,102.198)
O4: (25.132,143.672,102.425)
O2: (29.577,144.283,102.989)
C6: (27.115,146.553,101.845)
C5: (26.002,145.821,101.918)
O3': (30.672,147.498,98.689)
N3: (27.329,144.047,102.739)
OP1: (26.591,151.117,98.527)
OP2: (25.047,149.168,99.213)
C2: (28.493,144.767,102.668)
C1': (29.575,146.870,102.077)
C3': (29.832,147.408,99.811)
O5': (27.520,149.118,99.684)
O4': (29.226,148.241,101.892)
C5': (28.783,149.711,100.018)
P: (26.236,150.040,99.486)
C4': (29.717,148.690,100.605)
C2': (30.354,146.425,100.839)
O2': (31.757,146.470,101.042)
N1: (28.350,146.064,102.198)
O4: (25.132,143.672,102.425)
O2: (29.577,144.283,102.989)
C6: (27.115,146.553,101.845)
C5: (26.002,145.821,101.918)
O3': (30.672,147.498,98.689)
Image (generated by PyMOL):