ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1CSL:B6:B7

Extra

PDB:
ATOM 1 O3' C A 5 26.300 6.963 13.617 1.00 12.61 O
ATOM 2 P G A 6 27.499 5.897 13.577 1.00 12.70 P
ATOM 3 OP1 G A 6 28.713 6.602 14.073 1.00 12.73 O
ATOM 4 OP2 G A 6 27.538 5.217 12.259 1.00 12.73 O
ATOM 5 O5' G A 6 27.071 4.816 14.667 1.00 12.68 O
ATOM 6 C5' G A 6 26.962 5.185 16.050 1.00 12.66 C
ATOM 7 C4' G A 6 26.431 4.034 16.862 1.00 12.67 C
ATOM 8 O4' G A 6 25.102 3.685 16.398 1.00 12.60 O
ATOM 9 C3' G A 6 27.212 2.730 16.805 1.00 12.70 C
ATOM 10 O3' G A 6 28.307 2.753 17.718 1.00 12.92 O
ATOM 11 C2' G A 6 26.155 1.706 17.209 1.00 12.60 C
ATOM 12 O2' G A 6 25.961 1.689 18.612 1.00 12.59 O
ATOM 13 C1' G A 6 24.892 2.297 16.579 1.00 12.51 C
ATOM 14 N9 G A 6 24.501 1.699 15.304 1.00 12.31 N
ATOM 15 C8 G A 6 24.688 2.201 14.035 1.00 12.23 C
ATOM 16 N7 G A 6 24.166 1.446 13.105 1.00 12.18 N
ATOM 17 C5 G A 6 23.610 0.379 13.800 1.00 12.10 C
ATOM 18 C6 G A 6 22.886 -0.760 13.335 1.00 12.09 C
ATOM 19 O6 G A 6 22.556 -1.050 12.174 1.00 12.01 O
ATOM 20 N1 G A 6 22.530 -1.603 14.387 1.00 12.00 N
ATOM 21 C2 G A 6 22.822 -1.378 15.711 1.00 12.05 C
ATOM 22 N2 G A 6 22.424 -2.318 16.580 1.00 12.00 N
ATOM 23 N3 G A 6 23.464 -0.315 16.152 1.00 12.05 N
ATOM 24 C4 G A 6 23.829 0.512 15.155 1.00 12.18 C
ATOM 25 P G A 7 29.615 1.870 17.417 1.00 13.06 P
ATOM 26 OP1 G A 7 30.692 2.366 18.325 1.00 13.09 O
ATOM 27 OP2 G A 7 29.867 1.808 15.955 1.00 13.08 O
ATOM 28 O5' G A 7 29.210 0.402 17.889 1.00 13.17 O
TER

ATOM 1 O3' G B 6 28.307 2.753 17.718 1.00 12.92 O
ATOM 2 P G B 7 29.615 1.870 17.417 1.00 13.06 P
ATOM 3 OP1 G B 7 30.692 2.366 18.325 1.00 13.09 O
ATOM 4 OP2 G B 7 29.867 1.808 15.955 1.00 13.08 O
ATOM 5 O5' G B 7 29.210 0.402 17.889 1.00 13.17 O
ATOM 6 C5' G B 7 28.735 0.156 19.224 1.00 13.39 C
ATOM 7 C4' G B 7 28.297 -1.285 19.370 1.00 13.56 C
ATOM 8 O4' G B 7 27.179 -1.546 18.466 1.00 13.50 O
ATOM 9 C3' G B 7 29.363 -2.345 19.053 1.00 13.72 C
ATOM 10 O3' G B 7 29.183 -3.455 19.934 1.00 14.12 O
ATOM 11 C2' G B 7 28.954 -2.815 17.658 1.00 13.60 C
ATOM 12 O2' G B 7 29.353 -4.131 17.313 1.00 13.61 O
ATOM 13 C1' G B 7 27.437 -2.747 17.781 1.00 13.47 C
ATOM 14 N9 G B 7 26.694 -2.804 16.527 1.00 13.28 N
ATOM 15 C8 G B 7 25.742 -3.739 16.210 1.00 13.22 C
ATOM 16 N7 G B 7 25.303 -3.631 14.987 1.00 13.09 N
ATOM 17 C5 G B 7 25.995 -2.547 14.467 1.00 13.08 C
ATOM 18 C6 G B 7 25.954 -1.975 13.174 1.00 13.05 C
ATOM 19 O6 G B 7 25.294 -2.344 12.192 1.00 12.97 O
ATOM 20 N1 G B 7 26.799 -0.873 13.075 1.00 13.02 N
ATOM 21 C2 G B 7 27.596 -0.395 14.089 1.00 13.08 C
ATOM 22 N2 G B 7 28.349 0.684 13.799 1.00 13.07 N
ATOM 23 N3 G B 7 27.654 -0.934 15.296 1.00 13.08 N
ATOM 24 C4 G B 7 26.835 -2.000 15.414 1.00 13.16 C
ATOM 25 P U B 8 30.250 -3.758 21.100 1.00 14.44 P
ATOM 26 OP1 U B 8 29.642 -4.850 21.913 1.00 14.49 O
ATOM 27 OP2 U B 8 30.629 -2.481 21.753 1.00 14.48 O
ATOM 28 O5' U B 8 31.522 -4.356 20.345 1.00 14.73 O
TER

Atoms:
OP1: (28.713,6.602,14.073)
OP2: (27.538,5.217,12.259)
C3': (27.212,2.730,16.805)
C1': (24.892,2.297,16.579)
C5': (26.962,5.185,16.050)
O6: (22.556,-1.050,12.174)
O4': (25.102,3.685,16.398)
C8: (24.688,2.201,14.035)
C2: (22.822,-1.378,15.711)
C6: (22.886,-0.760,13.335)
C5: (23.610,0.379,13.800)
C4: (23.829,0.512,15.155)
P: (27.499,5.897,13.577)
C4': (26.431,4.034,16.862)
C2': (26.155,1.706,17.209)
O2': (25.961,1.689,18.612)
N1: (22.530,-1.603,14.387)
N2: (22.424,-2.318,16.580)
N3: (23.464,-0.315,16.152)
N7: (24.166,1.446,13.105)
N9: (24.501,1.699,15.304)
O5': (27.071,4.816,14.667)
O3': (28.307,2.753,17.718)
OP1: (30.692,2.366,18.325)
OP2: (29.867,1.808,15.955)
C3': (29.363,-2.345,19.053)
C1': (27.437,-2.747,17.781)
C5': (28.735,0.156,19.224)
O6: (25.294,-2.344,12.192)
O4': (27.179,-1.546,18.466)
C8: (25.742,-3.739,16.210)
C2: (27.596,-0.395,14.089)
C6: (25.954,-1.975,13.174)
C5: (25.995,-2.547,14.467)
C4: (26.835,-2.000,15.414)
P: (29.615,1.870,17.417)
C4': (28.297,-1.285,19.370)
C2': (28.954,-2.815,17.658)
O2': (29.353,-4.131,17.313)
N1: (26.799,-0.873,13.075)
N2: (28.349,0.684,13.799)
N3: (27.654,-0.934,15.296)
N7: (25.303,-3.631,14.987)
N9: (26.694,-2.804,16.527)
O5': (29.210,0.402,17.889)
O3': (29.183,-3.455,19.934)
Image (generated by PyMOL):
PyMOL image
show in jmol