Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:D6:D7
Extra
PDB:
ATOM 1 O3' C A 5 -11.725 9.070 10.359 1.00 39.76 O
ATOM 2 P G A 6 -10.616 8.774 9.260 1.00 41.67 P
ATOM 3 OP1 G A 6 -11.301 8.790 7.953 1.00 49.12 O
ATOM 4 OP2 G A 6 -9.871 7.574 9.700 1.00 45.58 O
ATOM 5 O5' G A 6 -9.633 10.030 9.345 1.00 45.53 O
ATOM 6 C5' G A 6 -10.141 11.362 9.350 1.00 46.41 C
ATOM 7 C4' G A 6 -9.052 12.340 9.737 1.00 36.72 C
ATOM 8 O4' G A 6 -8.671 12.123 11.122 1.00 36.58 O
ATOM 9 C3' G A 6 -7.747 12.200 8.975 1.00 45.84 C
ATOM 10 O3' G A 6 -7.789 12.898 7.719 1.00 47.35 O
ATOM 11 C2' G A 6 -6.776 12.879 9.932 1.00 48.12 C
ATOM 12 O2' G A 6 -6.939 14.280 9.841 1.00 46.06 O
ATOM 13 C1' G A 6 -7.306 12.432 11.298 1.00 34.30 C
ATOM 14 N9 G A 6 -6.631 11.297 11.929 1.00 43.70 N
ATOM 15 C8 G A 6 -7.112 10.026 12.074 1.00 35.22 C
ATOM 16 N7 G A 6 -6.307 9.242 12.745 1.00 38.34 N
ATOM 17 C5 G A 6 -5.228 10.042 13.064 1.00 31.22 C
ATOM 18 C6 G A 6 -4.053 9.749 13.792 1.00 32.97 C
ATOM 19 O6 G A 6 -3.740 8.711 14.356 1.00 31.54 O
ATOM 20 N1 G A 6 -3.194 10.835 13.840 1.00 39.56 N
ATOM 21 C2 G A 6 -3.436 12.056 13.273 1.00 35.78 C
ATOM 22 N2 G A 6 -2.456 12.982 13.412 1.00 36.63 N
ATOM 23 N3 G A 6 -4.539 12.353 12.616 1.00 39.70 N
ATOM 24 C4 G A 6 -5.388 11.306 12.546 1.00 43.76 C
ATOM 25 P G A 7 -6.838 12.417 6.499 1.00 49.79 P
ATOM 26 OP1 G A 7 -7.358 12.910 5.198 1.00 51.99 O
ATOM 27 OP2 G A 7 -6.576 10.973 6.669 1.00 51.30 O
ATOM 28 O5' G A 7 -5.415 13.077 6.744 1.00 49.08 O
TER
ATOM 1 O3' G B 6 -7.789 12.898 7.719 1.00 47.35 O
ATOM 2 P G B 7 -6.838 12.417 6.499 1.00 49.79 P
ATOM 3 OP1 G B 7 -7.358 12.910 5.198 1.00 51.99 O
ATOM 4 OP2 G B 7 -6.576 10.973 6.669 1.00 51.30 O
ATOM 5 O5' G B 7 -5.415 13.077 6.744 1.00 49.08 O
ATOM 6 C5' G B 7 -5.230 14.381 7.282 1.00 40.45 C
ATOM 7 C4' G B 7 -3.771 14.525 7.600 1.00 48.78 C
ATOM 8 O4' G B 7 -3.461 13.771 8.800 1.00 42.48 O
ATOM 9 C3' G B 7 -2.927 13.853 6.514 1.00 57.23 C
ATOM 10 O3' G B 7 -2.705 14.674 5.345 1.00 64.63 O
ATOM 11 C2' G B 7 -1.714 13.232 7.223 1.00 52.76 C
ATOM 12 O2' G B 7 -0.469 13.869 7.023 1.00 67.40 O
ATOM 13 C1' G B 7 -2.135 13.282 8.695 1.00 50.41 C
ATOM 14 N9 G B 7 -1.974 12.078 9.500 1.00 38.61 N
ATOM 15 C8 G B 7 -0.944 11.838 10.361 1.00 28.58 C
ATOM 16 N7 G B 7 -1.054 10.712 10.994 1.00 35.48 N
ATOM 17 C5 G B 7 -2.225 10.156 10.499 1.00 38.10 C
ATOM 18 C6 G B 7 -2.859 8.936 10.820 1.00 29.01 C
ATOM 19 O6 G B 7 -2.503 8.079 11.617 1.00 48.17 O
ATOM 20 N1 G B 7 -4.029 8.766 10.113 1.00 38.29 N
ATOM 21 C2 G B 7 -4.522 9.645 9.206 1.00 43.34 C
ATOM 22 N2 G B 7 -5.665 9.289 8.648 1.00 47.15 N
ATOM 23 N3 G B 7 -3.936 10.790 8.878 1.00 46.71 N
ATOM 24 C4 G B 7 -2.801 10.981 9.571 1.00 40.01 C
ATOM 25 P U B 8 -2.078 16.172 5.462 1.00 63.62 P
ATOM 26 OP1 U B 8 -1.201 16.346 6.649 1.00 61.05 O
ATOM 27 OP2 U B 8 -3.224 17.088 5.265 1.00 50.18 O
ATOM 28 O5' U B 8 -1.130 16.289 4.188 1.00 47.62 O
TER
ATOM 2 P G A 6 -10.616 8.774 9.260 1.00 41.67 P
ATOM 3 OP1 G A 6 -11.301 8.790 7.953 1.00 49.12 O
ATOM 4 OP2 G A 6 -9.871 7.574 9.700 1.00 45.58 O
ATOM 5 O5' G A 6 -9.633 10.030 9.345 1.00 45.53 O
ATOM 6 C5' G A 6 -10.141 11.362 9.350 1.00 46.41 C
ATOM 7 C4' G A 6 -9.052 12.340 9.737 1.00 36.72 C
ATOM 8 O4' G A 6 -8.671 12.123 11.122 1.00 36.58 O
ATOM 9 C3' G A 6 -7.747 12.200 8.975 1.00 45.84 C
ATOM 10 O3' G A 6 -7.789 12.898 7.719 1.00 47.35 O
ATOM 11 C2' G A 6 -6.776 12.879 9.932 1.00 48.12 C
ATOM 12 O2' G A 6 -6.939 14.280 9.841 1.00 46.06 O
ATOM 13 C1' G A 6 -7.306 12.432 11.298 1.00 34.30 C
ATOM 14 N9 G A 6 -6.631 11.297 11.929 1.00 43.70 N
ATOM 15 C8 G A 6 -7.112 10.026 12.074 1.00 35.22 C
ATOM 16 N7 G A 6 -6.307 9.242 12.745 1.00 38.34 N
ATOM 17 C5 G A 6 -5.228 10.042 13.064 1.00 31.22 C
ATOM 18 C6 G A 6 -4.053 9.749 13.792 1.00 32.97 C
ATOM 19 O6 G A 6 -3.740 8.711 14.356 1.00 31.54 O
ATOM 20 N1 G A 6 -3.194 10.835 13.840 1.00 39.56 N
ATOM 21 C2 G A 6 -3.436 12.056 13.273 1.00 35.78 C
ATOM 22 N2 G A 6 -2.456 12.982 13.412 1.00 36.63 N
ATOM 23 N3 G A 6 -4.539 12.353 12.616 1.00 39.70 N
ATOM 24 C4 G A 6 -5.388 11.306 12.546 1.00 43.76 C
ATOM 25 P G A 7 -6.838 12.417 6.499 1.00 49.79 P
ATOM 26 OP1 G A 7 -7.358 12.910 5.198 1.00 51.99 O
ATOM 27 OP2 G A 7 -6.576 10.973 6.669 1.00 51.30 O
ATOM 28 O5' G A 7 -5.415 13.077 6.744 1.00 49.08 O
TER
ATOM 1 O3' G B 6 -7.789 12.898 7.719 1.00 47.35 O
ATOM 2 P G B 7 -6.838 12.417 6.499 1.00 49.79 P
ATOM 3 OP1 G B 7 -7.358 12.910 5.198 1.00 51.99 O
ATOM 4 OP2 G B 7 -6.576 10.973 6.669 1.00 51.30 O
ATOM 5 O5' G B 7 -5.415 13.077 6.744 1.00 49.08 O
ATOM 6 C5' G B 7 -5.230 14.381 7.282 1.00 40.45 C
ATOM 7 C4' G B 7 -3.771 14.525 7.600 1.00 48.78 C
ATOM 8 O4' G B 7 -3.461 13.771 8.800 1.00 42.48 O
ATOM 9 C3' G B 7 -2.927 13.853 6.514 1.00 57.23 C
ATOM 10 O3' G B 7 -2.705 14.674 5.345 1.00 64.63 O
ATOM 11 C2' G B 7 -1.714 13.232 7.223 1.00 52.76 C
ATOM 12 O2' G B 7 -0.469 13.869 7.023 1.00 67.40 O
ATOM 13 C1' G B 7 -2.135 13.282 8.695 1.00 50.41 C
ATOM 14 N9 G B 7 -1.974 12.078 9.500 1.00 38.61 N
ATOM 15 C8 G B 7 -0.944 11.838 10.361 1.00 28.58 C
ATOM 16 N7 G B 7 -1.054 10.712 10.994 1.00 35.48 N
ATOM 17 C5 G B 7 -2.225 10.156 10.499 1.00 38.10 C
ATOM 18 C6 G B 7 -2.859 8.936 10.820 1.00 29.01 C
ATOM 19 O6 G B 7 -2.503 8.079 11.617 1.00 48.17 O
ATOM 20 N1 G B 7 -4.029 8.766 10.113 1.00 38.29 N
ATOM 21 C2 G B 7 -4.522 9.645 9.206 1.00 43.34 C
ATOM 22 N2 G B 7 -5.665 9.289 8.648 1.00 47.15 N
ATOM 23 N3 G B 7 -3.936 10.790 8.878 1.00 46.71 N
ATOM 24 C4 G B 7 -2.801 10.981 9.571 1.00 40.01 C
ATOM 25 P U B 8 -2.078 16.172 5.462 1.00 63.62 P
ATOM 26 OP1 U B 8 -1.201 16.346 6.649 1.00 61.05 O
ATOM 27 OP2 U B 8 -3.224 17.088 5.265 1.00 50.18 O
ATOM 28 O5' U B 8 -1.130 16.289 4.188 1.00 47.62 O
TER
Atoms:
OP1: (-11.301,8.790,7.953)
OP2: (-9.871,7.574,9.700)
C3': (-7.747,12.200,8.975)
C1': (-7.306,12.432,11.298)
C5': (-10.141,11.362,9.350)
O6: (-3.740,8.711,14.356)
O4': (-8.671,12.123,11.122)
C8: (-7.112,10.026,12.074)
C2: (-3.436,12.056,13.273)
C6: (-4.053,9.749,13.792)
C5: (-5.228,10.042,13.064)
C4: (-5.388,11.306,12.546)
P: (-10.616,8.774,9.260)
C4': (-9.052,12.340,9.737)
C2': (-6.776,12.879,9.932)
O2': (-6.939,14.280,9.841)
N1: (-3.194,10.835,13.840)
N2: (-2.456,12.982,13.412)
N3: (-4.539,12.353,12.616)
N7: (-6.307,9.242,12.745)
N9: (-6.631,11.297,11.929)
O5': (-9.633,10.030,9.345)
O3': (-7.789,12.898,7.719)
OP2: (-9.871,7.574,9.700)
C3': (-7.747,12.200,8.975)
C1': (-7.306,12.432,11.298)
C5': (-10.141,11.362,9.350)
O6: (-3.740,8.711,14.356)
O4': (-8.671,12.123,11.122)
C8: (-7.112,10.026,12.074)
C2: (-3.436,12.056,13.273)
C6: (-4.053,9.749,13.792)
C5: (-5.228,10.042,13.064)
C4: (-5.388,11.306,12.546)
P: (-10.616,8.774,9.260)
C4': (-9.052,12.340,9.737)
C2': (-6.776,12.879,9.932)
O2': (-6.939,14.280,9.841)
N1: (-3.194,10.835,13.840)
N2: (-2.456,12.982,13.412)
N3: (-4.539,12.353,12.616)
N7: (-6.307,9.242,12.745)
N9: (-6.631,11.297,11.929)
O5': (-9.633,10.030,9.345)
O3': (-7.789,12.898,7.719)
OP1: (-7.358,12.910,5.198)
OP2: (-6.576,10.973,6.669)
C3': (-2.927,13.853,6.514)
C1': (-2.135,13.282,8.695)
C5': (-5.230,14.381,7.282)
O6: (-2.503,8.079,11.617)
O4': (-3.461,13.771,8.800)
C8: (-0.944,11.838,10.361)
C2: (-4.522,9.645,9.206)
C6: (-2.859,8.936,10.820)
C5: (-2.225,10.156,10.499)
C4: (-2.801,10.981,9.571)
P: (-6.838,12.417,6.499)
C4': (-3.771,14.525,7.600)
C2': (-1.714,13.232,7.223)
O2': (-0.469,13.869,7.023)
N1: (-4.029,8.766,10.113)
N2: (-5.665,9.289,8.648)
N3: (-3.936,10.790,8.878)
N7: (-1.054,10.712,10.994)
N9: (-1.974,12.078,9.500)
O5': (-5.415,13.077,6.744)
O3': (-2.705,14.674,5.345)
OP2: (-6.576,10.973,6.669)
C3': (-2.927,13.853,6.514)
C1': (-2.135,13.282,8.695)
C5': (-5.230,14.381,7.282)
O6: (-2.503,8.079,11.617)
O4': (-3.461,13.771,8.800)
C8: (-0.944,11.838,10.361)
C2: (-4.522,9.645,9.206)
C6: (-2.859,8.936,10.820)
C5: (-2.225,10.156,10.499)
C4: (-2.801,10.981,9.571)
P: (-6.838,12.417,6.499)
C4': (-3.771,14.525,7.600)
C2': (-1.714,13.232,7.223)
O2': (-0.469,13.869,7.023)
N1: (-4.029,8.766,10.113)
N2: (-5.665,9.289,8.648)
N3: (-3.936,10.790,8.878)
N7: (-1.054,10.712,10.994)
N9: (-1.974,12.078,9.500)
O5': (-5.415,13.077,6.744)
O3': (-2.705,14.674,5.345)
Image (generated by PyMOL):