Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBT:D9:D18
Extra
PDB:
ATOM 1 O3' A A 8 -6.924 33.122 -3.405 1.00 42.81 O
ATOM 2 P G A 9 -6.959 33.313 -4.985 1.00 40.12 P
ATOM 3 OP1 G A 9 -6.536 32.041 -5.613 1.00 43.99 O
ATOM 4 OP2 G A 9 -6.169 34.550 -5.234 1.00 43.20 O
ATOM 5 O5' G A 9 -8.461 33.726 -5.352 1.00 40.93 O
ATOM 6 C5' G A 9 -9.651 33.062 -4.909 1.00 38.54 C
ATOM 7 C4' G A 9 -9.698 32.868 -3.410 1.00 35.46 C
ATOM 8 O4' G A 9 -9.886 34.142 -2.713 1.00 33.81 O
ATOM 9 C3' G A 9 -10.934 32.044 -3.038 1.00 34.04 C
ATOM 10 O3' G A 9 -10.681 31.426 -1.779 1.00 36.55 O
ATOM 11 C2' G A 9 -11.996 33.123 -2.864 1.00 33.37 C
ATOM 12 O2' G A 9 -13.126 32.733 -2.118 1.00 33.43 O
ATOM 13 C1' G A 9 -11.175 34.180 -2.140 1.00 33.35 C
ATOM 14 N9 G A 9 -11.660 35.552 -2.104 1.00 35.64 N
ATOM 15 C8 G A 9 -12.158 36.300 -3.141 1.00 36.26 C
ATOM 16 N7 G A 9 -12.502 37.508 -2.780 1.00 38.51 N
ATOM 17 C5 G A 9 -12.213 37.557 -1.423 1.00 35.88 C
ATOM 18 C6 G A 9 -12.370 38.610 -0.484 1.00 36.98 C
ATOM 19 O6 G A 9 -12.817 39.754 -0.666 1.00 43.53 O
ATOM 20 N1 G A 9 -11.945 38.228 0.781 1.00 33.92 N
ATOM 21 C2 G A 9 -11.439 36.993 1.105 1.00 35.05 C
ATOM 22 N2 G A 9 -11.078 36.813 2.383 1.00 38.66 N
ATOM 23 N3 G A 9 -11.296 36.007 0.246 1.00 35.06 N
ATOM 24 C4 G A 9 -11.696 36.356 -0.991 1.00 35.80 C
ATOM 25 P U A 10 -11.685 30.310 -1.205 1.00 38.34 P
ATOM 26 OP1 U A 10 -12.338 29.642 -2.369 1.00 38.21 O
ATOM 27 OP2 U A 10 -12.518 30.914 -0.143 1.00 33.88 O
ATOM 28 O5' U A 10 -10.714 29.256 -0.505 1.00 41.13 O
TER
ATOM 1 O3' G B 17 -17.843 39.752 4.929 1.00 44.50 O
ATOM 2 P G B 18 -16.416 40.370 4.528 1.00 44.34 P
ATOM 3 OP1 G B 18 -16.193 41.544 5.394 1.00 45.10 O
ATOM 4 OP2 G B 18 -16.354 40.516 3.053 1.00 46.08 O
ATOM 5 O5' G B 18 -15.368 39.251 4.946 1.00 42.24 O
ATOM 6 C5' G B 18 -15.240 38.835 6.303 1.00 38.78 C
ATOM 7 C4' G B 18 -14.121 37.828 6.439 1.00 37.52 C
ATOM 8 O4' G B 18 -14.600 36.498 6.084 1.00 35.01 O
ATOM 9 C3' G B 18 -12.896 38.024 5.551 1.00 36.07 C
ATOM 10 O3' G B 18 -12.032 39.044 6.057 1.00 37.80 O
ATOM 11 C2' G B 18 -12.303 36.622 5.579 1.00 34.70 C
ATOM 12 O2' G B 18 -11.686 36.283 6.805 1.00 35.88 O
ATOM 13 C1' G B 18 -13.569 35.785 5.408 1.00 35.09 C
ATOM 14 N9 G B 18 -13.938 35.667 4.001 1.00 36.41 N
ATOM 15 C8 G B 18 -14.699 36.549 3.274 1.00 35.42 C
ATOM 16 N7 G B 18 -14.826 36.207 2.025 1.00 38.27 N
ATOM 17 C5 G B 18 -14.114 35.021 1.919 1.00 36.60 C
ATOM 18 C6 G B 18 -13.901 34.177 0.798 1.00 37.32 C
ATOM 19 O6 G B 18 -14.307 34.320 -0.358 1.00 41.43 O
ATOM 20 N1 G B 18 -13.132 33.071 1.129 1.00 31.97 N
ATOM 21 C2 G B 18 -12.633 32.807 2.375 1.00 32.77 C
ATOM 22 N2 G B 18 -11.925 31.683 2.490 1.00 33.90 N
ATOM 23 N3 G B 18 -12.819 33.585 3.430 1.00 34.45 N
ATOM 24 C4 G B 18 -13.566 34.668 3.130 1.00 36.10 C
ATOM 25 P A B 19 -10.711 39.476 5.234 1.00 42.85 P
ATOM 26 OP1 A B 19 -10.084 40.529 6.075 1.00 39.56 O
ATOM 27 OP2 A B 19 -11.043 39.772 3.821 1.00 37.24 O
ATOM 28 O5' A B 19 -9.815 38.153 5.235 1.00 40.31 O
TER
ATOM 2 P G A 9 -6.959 33.313 -4.985 1.00 40.12 P
ATOM 3 OP1 G A 9 -6.536 32.041 -5.613 1.00 43.99 O
ATOM 4 OP2 G A 9 -6.169 34.550 -5.234 1.00 43.20 O
ATOM 5 O5' G A 9 -8.461 33.726 -5.352 1.00 40.93 O
ATOM 6 C5' G A 9 -9.651 33.062 -4.909 1.00 38.54 C
ATOM 7 C4' G A 9 -9.698 32.868 -3.410 1.00 35.46 C
ATOM 8 O4' G A 9 -9.886 34.142 -2.713 1.00 33.81 O
ATOM 9 C3' G A 9 -10.934 32.044 -3.038 1.00 34.04 C
ATOM 10 O3' G A 9 -10.681 31.426 -1.779 1.00 36.55 O
ATOM 11 C2' G A 9 -11.996 33.123 -2.864 1.00 33.37 C
ATOM 12 O2' G A 9 -13.126 32.733 -2.118 1.00 33.43 O
ATOM 13 C1' G A 9 -11.175 34.180 -2.140 1.00 33.35 C
ATOM 14 N9 G A 9 -11.660 35.552 -2.104 1.00 35.64 N
ATOM 15 C8 G A 9 -12.158 36.300 -3.141 1.00 36.26 C
ATOM 16 N7 G A 9 -12.502 37.508 -2.780 1.00 38.51 N
ATOM 17 C5 G A 9 -12.213 37.557 -1.423 1.00 35.88 C
ATOM 18 C6 G A 9 -12.370 38.610 -0.484 1.00 36.98 C
ATOM 19 O6 G A 9 -12.817 39.754 -0.666 1.00 43.53 O
ATOM 20 N1 G A 9 -11.945 38.228 0.781 1.00 33.92 N
ATOM 21 C2 G A 9 -11.439 36.993 1.105 1.00 35.05 C
ATOM 22 N2 G A 9 -11.078 36.813 2.383 1.00 38.66 N
ATOM 23 N3 G A 9 -11.296 36.007 0.246 1.00 35.06 N
ATOM 24 C4 G A 9 -11.696 36.356 -0.991 1.00 35.80 C
ATOM 25 P U A 10 -11.685 30.310 -1.205 1.00 38.34 P
ATOM 26 OP1 U A 10 -12.338 29.642 -2.369 1.00 38.21 O
ATOM 27 OP2 U A 10 -12.518 30.914 -0.143 1.00 33.88 O
ATOM 28 O5' U A 10 -10.714 29.256 -0.505 1.00 41.13 O
TER
ATOM 1 O3' G B 17 -17.843 39.752 4.929 1.00 44.50 O
ATOM 2 P G B 18 -16.416 40.370 4.528 1.00 44.34 P
ATOM 3 OP1 G B 18 -16.193 41.544 5.394 1.00 45.10 O
ATOM 4 OP2 G B 18 -16.354 40.516 3.053 1.00 46.08 O
ATOM 5 O5' G B 18 -15.368 39.251 4.946 1.00 42.24 O
ATOM 6 C5' G B 18 -15.240 38.835 6.303 1.00 38.78 C
ATOM 7 C4' G B 18 -14.121 37.828 6.439 1.00 37.52 C
ATOM 8 O4' G B 18 -14.600 36.498 6.084 1.00 35.01 O
ATOM 9 C3' G B 18 -12.896 38.024 5.551 1.00 36.07 C
ATOM 10 O3' G B 18 -12.032 39.044 6.057 1.00 37.80 O
ATOM 11 C2' G B 18 -12.303 36.622 5.579 1.00 34.70 C
ATOM 12 O2' G B 18 -11.686 36.283 6.805 1.00 35.88 O
ATOM 13 C1' G B 18 -13.569 35.785 5.408 1.00 35.09 C
ATOM 14 N9 G B 18 -13.938 35.667 4.001 1.00 36.41 N
ATOM 15 C8 G B 18 -14.699 36.549 3.274 1.00 35.42 C
ATOM 16 N7 G B 18 -14.826 36.207 2.025 1.00 38.27 N
ATOM 17 C5 G B 18 -14.114 35.021 1.919 1.00 36.60 C
ATOM 18 C6 G B 18 -13.901 34.177 0.798 1.00 37.32 C
ATOM 19 O6 G B 18 -14.307 34.320 -0.358 1.00 41.43 O
ATOM 20 N1 G B 18 -13.132 33.071 1.129 1.00 31.97 N
ATOM 21 C2 G B 18 -12.633 32.807 2.375 1.00 32.77 C
ATOM 22 N2 G B 18 -11.925 31.683 2.490 1.00 33.90 N
ATOM 23 N3 G B 18 -12.819 33.585 3.430 1.00 34.45 N
ATOM 24 C4 G B 18 -13.566 34.668 3.130 1.00 36.10 C
ATOM 25 P A B 19 -10.711 39.476 5.234 1.00 42.85 P
ATOM 26 OP1 A B 19 -10.084 40.529 6.075 1.00 39.56 O
ATOM 27 OP2 A B 19 -11.043 39.772 3.821 1.00 37.24 O
ATOM 28 O5' A B 19 -9.815 38.153 5.235 1.00 40.31 O
TER
Atoms:
OP1: (-6.536,32.041,-5.613)
OP2: (-6.169,34.550,-5.234)
C3': (-10.934,32.044,-3.038)
C1': (-11.175,34.180,-2.140)
C5': (-9.651,33.062,-4.909)
O6: (-12.817,39.754,-0.666)
O4': (-9.886,34.142,-2.713)
C8: (-12.158,36.300,-3.141)
C2: (-11.439,36.993,1.105)
C6: (-12.370,38.610,-0.484)
C5: (-12.213,37.557,-1.423)
C4: (-11.696,36.356,-0.991)
P: (-6.959,33.313,-4.985)
C4': (-9.698,32.868,-3.410)
C2': (-11.996,33.123,-2.864)
O2': (-13.126,32.733,-2.118)
N1: (-11.945,38.228,0.781)
N2: (-11.078,36.813,2.383)
N3: (-11.296,36.007,0.246)
N7: (-12.502,37.508,-2.780)
N9: (-11.660,35.552,-2.104)
O5': (-8.461,33.726,-5.352)
O3': (-10.681,31.426,-1.779)
OP2: (-6.169,34.550,-5.234)
C3': (-10.934,32.044,-3.038)
C1': (-11.175,34.180,-2.140)
C5': (-9.651,33.062,-4.909)
O6: (-12.817,39.754,-0.666)
O4': (-9.886,34.142,-2.713)
C8: (-12.158,36.300,-3.141)
C2: (-11.439,36.993,1.105)
C6: (-12.370,38.610,-0.484)
C5: (-12.213,37.557,-1.423)
C4: (-11.696,36.356,-0.991)
P: (-6.959,33.313,-4.985)
C4': (-9.698,32.868,-3.410)
C2': (-11.996,33.123,-2.864)
O2': (-13.126,32.733,-2.118)
N1: (-11.945,38.228,0.781)
N2: (-11.078,36.813,2.383)
N3: (-11.296,36.007,0.246)
N7: (-12.502,37.508,-2.780)
N9: (-11.660,35.552,-2.104)
O5': (-8.461,33.726,-5.352)
O3': (-10.681,31.426,-1.779)
OP1: (-16.193,41.544,5.394)
OP2: (-16.354,40.516,3.053)
C3': (-12.896,38.024,5.551)
C1': (-13.569,35.785,5.408)
C5': (-15.240,38.835,6.303)
O6: (-14.307,34.320,-0.358)
O4': (-14.600,36.498,6.084)
C8: (-14.699,36.549,3.274)
C2: (-12.633,32.807,2.375)
C6: (-13.901,34.177,0.798)
C5: (-14.114,35.021,1.919)
C4: (-13.566,34.668,3.130)
P: (-16.416,40.370,4.528)
C4': (-14.121,37.828,6.439)
C2': (-12.303,36.622,5.579)
O2': (-11.686,36.283,6.805)
N1: (-13.132,33.071,1.129)
N2: (-11.925,31.683,2.490)
N3: (-12.819,33.585,3.430)
N7: (-14.826,36.207,2.025)
N9: (-13.938,35.667,4.001)
O5': (-15.368,39.251,4.946)
O3': (-12.032,39.044,6.057)
OP2: (-16.354,40.516,3.053)
C3': (-12.896,38.024,5.551)
C1': (-13.569,35.785,5.408)
C5': (-15.240,38.835,6.303)
O6: (-14.307,34.320,-0.358)
O4': (-14.600,36.498,6.084)
C8: (-14.699,36.549,3.274)
C2: (-12.633,32.807,2.375)
C6: (-13.901,34.177,0.798)
C5: (-14.114,35.021,1.919)
C4: (-13.566,34.668,3.130)
P: (-16.416,40.370,4.528)
C4': (-14.121,37.828,6.439)
C2': (-12.303,36.622,5.579)
O2': (-11.686,36.283,6.805)
N1: (-13.132,33.071,1.129)
N2: (-11.925,31.683,2.490)
N3: (-12.819,33.585,3.430)
N7: (-14.826,36.207,2.025)
N9: (-13.938,35.667,4.001)
O5': (-15.368,39.251,4.946)
O3': (-12.032,39.044,6.057)
Image (generated by PyMOL):