Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A280:A346
Extra
PDB:
ATOM 1 O3' C A 279 55.711 128.767 -1.480 1.00 88.12 O
ATOM 2 P G A 280 55.141 129.609 -0.240 1.00 88.67 P
ATOM 3 OP1 G A 280 54.119 130.554 -0.760 1.00 89.55 O
ATOM 4 OP2 G A 280 56.310 130.141 0.519 1.00 89.63 O
ATOM 5 O5' G A 280 54.361 128.510 0.611 1.00 88.65 O
ATOM 6 C5' G A 280 53.182 127.873 0.058 1.00 87.36 C
ATOM 7 C4' G A 280 52.788 126.662 0.875 1.00 86.23 C
ATOM 8 O4' G A 280 53.825 125.641 0.793 1.00 84.79 O
ATOM 9 C3' G A 280 52.627 126.919 2.362 1.00 85.74 C
ATOM 10 O3' G A 280 51.369 127.493 2.697 1.00 86.49 O
ATOM 11 C2' G A 280 52.849 125.536 2.953 1.00 84.27 C
ATOM 12 O2' G A 280 51.711 124.706 2.868 1.00 83.05 O
ATOM 13 C1' G A 280 53.977 125.016 2.055 1.00 83.47 C
ATOM 14 N9 G A 280 55.285 125.394 2.584 1.00 82.01 N
ATOM 15 C8 G A 280 55.953 126.583 2.382 1.00 81.63 C
ATOM 16 N7 G A 280 57.077 126.657 3.042 1.00 81.45 N
ATOM 17 C5 G A 280 57.169 125.438 3.705 1.00 81.41 C
ATOM 18 C6 G A 280 58.169 124.943 4.589 1.00 81.11 C
ATOM 19 O6 G A 280 59.208 125.497 4.959 1.00 82.41 O
ATOM 20 N1 G A 280 57.860 123.667 5.050 1.00 79.52 N
ATOM 21 C2 G A 280 56.737 122.958 4.704 1.00 79.38 C
ATOM 22 N2 G A 280 56.608 121.750 5.251 1.00 79.55 N
ATOM 23 N3 G A 280 55.803 123.404 3.879 1.00 79.66 N
ATOM 24 C4 G A 280 56.079 124.643 3.422 1.00 81.13 C
ATOM 25 P A A 281 51.218 128.281 4.086 1.00 87.63 P
ATOM 26 OP1 A A 281 49.958 129.075 4.075 1.00 87.28 O
ATOM 27 OP2 A A 281 52.527 128.965 4.331 1.00 87.48 O
ATOM 28 O5' A A 281 51.038 127.114 5.156 1.00 86.79 O
TER
ATOM 1 O3' A B 345 57.061 125.025 12.869 1.00 82.09 O
ATOM 2 P G B 346 58.388 125.446 13.653 1.00 83.74 P
ATOM 3 OP1 G B 346 58.714 124.366 14.629 1.00 84.09 O
ATOM 4 OP2 G B 346 58.163 126.837 14.139 1.00 84.15 O
ATOM 5 O5' G B 346 59.502 125.454 12.513 1.00 85.18 O
ATOM 6 C5' G B 346 59.306 126.223 11.307 1.00 86.32 C
ATOM 7 C4' G B 346 58.819 125.332 10.186 1.00 86.88 C
ATOM 8 O4' G B 346 58.057 126.125 9.225 1.00 86.41 O
ATOM 9 C3' G B 346 59.872 124.573 9.373 1.00 87.19 C
ATOM 10 O3' G B 346 59.262 123.319 8.991 1.00 89.27 O
ATOM 11 C2' G B 346 60.071 125.522 8.188 1.00 85.91 C
ATOM 12 O2' G B 346 60.651 124.918 7.056 1.00 86.42 O
ATOM 13 C1' G B 346 58.623 125.964 7.934 1.00 85.38 C
ATOM 14 N9 G B 346 58.386 127.188 7.163 1.00 83.93 N
ATOM 15 C8 G B 346 59.277 128.202 6.889 1.00 83.91 C
ATOM 16 N7 G B 346 58.748 129.179 6.200 1.00 84.21 N
ATOM 17 C5 G B 346 57.430 128.786 6.000 1.00 84.22 C
ATOM 18 C6 G B 346 56.359 129.453 5.322 1.00 85.08 C
ATOM 19 O6 G B 346 56.364 130.570 4.765 1.00 85.42 O
ATOM 20 N1 G B 346 55.192 128.693 5.344 1.00 84.47 N
ATOM 21 C2 G B 346 55.064 127.463 5.947 1.00 83.52 C
ATOM 22 N2 G B 346 53.855 126.889 5.851 1.00 81.73 N
ATOM 23 N3 G B 346 56.046 126.842 6.594 1.00 83.24 N
ATOM 24 C4 G B 346 57.192 127.555 6.579 1.00 83.51 C
ATOM 25 P U B 347 60.059 122.228 8.095 1.00 90.47 P
ATOM 26 OP1 U B 347 61.449 122.021 8.620 1.00 89.46 O
ATOM 27 OP2 U B 347 59.857 122.579 6.656 1.00 90.68 O
ATOM 28 O5' U B 347 59.229 120.885 8.331 1.00 89.37 O
TER
ATOM 2 P G A 280 55.141 129.609 -0.240 1.00 88.67 P
ATOM 3 OP1 G A 280 54.119 130.554 -0.760 1.00 89.55 O
ATOM 4 OP2 G A 280 56.310 130.141 0.519 1.00 89.63 O
ATOM 5 O5' G A 280 54.361 128.510 0.611 1.00 88.65 O
ATOM 6 C5' G A 280 53.182 127.873 0.058 1.00 87.36 C
ATOM 7 C4' G A 280 52.788 126.662 0.875 1.00 86.23 C
ATOM 8 O4' G A 280 53.825 125.641 0.793 1.00 84.79 O
ATOM 9 C3' G A 280 52.627 126.919 2.362 1.00 85.74 C
ATOM 10 O3' G A 280 51.369 127.493 2.697 1.00 86.49 O
ATOM 11 C2' G A 280 52.849 125.536 2.953 1.00 84.27 C
ATOM 12 O2' G A 280 51.711 124.706 2.868 1.00 83.05 O
ATOM 13 C1' G A 280 53.977 125.016 2.055 1.00 83.47 C
ATOM 14 N9 G A 280 55.285 125.394 2.584 1.00 82.01 N
ATOM 15 C8 G A 280 55.953 126.583 2.382 1.00 81.63 C
ATOM 16 N7 G A 280 57.077 126.657 3.042 1.00 81.45 N
ATOM 17 C5 G A 280 57.169 125.438 3.705 1.00 81.41 C
ATOM 18 C6 G A 280 58.169 124.943 4.589 1.00 81.11 C
ATOM 19 O6 G A 280 59.208 125.497 4.959 1.00 82.41 O
ATOM 20 N1 G A 280 57.860 123.667 5.050 1.00 79.52 N
ATOM 21 C2 G A 280 56.737 122.958 4.704 1.00 79.38 C
ATOM 22 N2 G A 280 56.608 121.750 5.251 1.00 79.55 N
ATOM 23 N3 G A 280 55.803 123.404 3.879 1.00 79.66 N
ATOM 24 C4 G A 280 56.079 124.643 3.422 1.00 81.13 C
ATOM 25 P A A 281 51.218 128.281 4.086 1.00 87.63 P
ATOM 26 OP1 A A 281 49.958 129.075 4.075 1.00 87.28 O
ATOM 27 OP2 A A 281 52.527 128.965 4.331 1.00 87.48 O
ATOM 28 O5' A A 281 51.038 127.114 5.156 1.00 86.79 O
TER
ATOM 1 O3' A B 345 57.061 125.025 12.869 1.00 82.09 O
ATOM 2 P G B 346 58.388 125.446 13.653 1.00 83.74 P
ATOM 3 OP1 G B 346 58.714 124.366 14.629 1.00 84.09 O
ATOM 4 OP2 G B 346 58.163 126.837 14.139 1.00 84.15 O
ATOM 5 O5' G B 346 59.502 125.454 12.513 1.00 85.18 O
ATOM 6 C5' G B 346 59.306 126.223 11.307 1.00 86.32 C
ATOM 7 C4' G B 346 58.819 125.332 10.186 1.00 86.88 C
ATOM 8 O4' G B 346 58.057 126.125 9.225 1.00 86.41 O
ATOM 9 C3' G B 346 59.872 124.573 9.373 1.00 87.19 C
ATOM 10 O3' G B 346 59.262 123.319 8.991 1.00 89.27 O
ATOM 11 C2' G B 346 60.071 125.522 8.188 1.00 85.91 C
ATOM 12 O2' G B 346 60.651 124.918 7.056 1.00 86.42 O
ATOM 13 C1' G B 346 58.623 125.964 7.934 1.00 85.38 C
ATOM 14 N9 G B 346 58.386 127.188 7.163 1.00 83.93 N
ATOM 15 C8 G B 346 59.277 128.202 6.889 1.00 83.91 C
ATOM 16 N7 G B 346 58.748 129.179 6.200 1.00 84.21 N
ATOM 17 C5 G B 346 57.430 128.786 6.000 1.00 84.22 C
ATOM 18 C6 G B 346 56.359 129.453 5.322 1.00 85.08 C
ATOM 19 O6 G B 346 56.364 130.570 4.765 1.00 85.42 O
ATOM 20 N1 G B 346 55.192 128.693 5.344 1.00 84.47 N
ATOM 21 C2 G B 346 55.064 127.463 5.947 1.00 83.52 C
ATOM 22 N2 G B 346 53.855 126.889 5.851 1.00 81.73 N
ATOM 23 N3 G B 346 56.046 126.842 6.594 1.00 83.24 N
ATOM 24 C4 G B 346 57.192 127.555 6.579 1.00 83.51 C
ATOM 25 P U B 347 60.059 122.228 8.095 1.00 90.47 P
ATOM 26 OP1 U B 347 61.449 122.021 8.620 1.00 89.46 O
ATOM 27 OP2 U B 347 59.857 122.579 6.656 1.00 90.68 O
ATOM 28 O5' U B 347 59.229 120.885 8.331 1.00 89.37 O
TER
Atoms:
OP1: (54.119,130.554,-0.760)
OP2: (56.310,130.141,0.519)
C3': (52.627,126.919,2.362)
C1': (53.977,125.016,2.055)
C5': (53.182,127.873,0.058)
O6: (59.208,125.497,4.959)
O4': (53.825,125.641,0.793)
C8: (55.953,126.583,2.382)
C2: (56.737,122.958,4.704)
C6: (58.169,124.943,4.589)
C5: (57.169,125.438,3.705)
C4: (56.079,124.643,3.422)
P: (55.141,129.609,-0.240)
C4': (52.788,126.662,0.875)
C2': (52.849,125.536,2.953)
O2': (51.711,124.706,2.868)
N1: (57.860,123.667,5.050)
N2: (56.608,121.750,5.251)
N3: (55.803,123.404,3.879)
N7: (57.077,126.657,3.042)
N9: (55.285,125.394,2.584)
O5': (54.361,128.510,0.611)
O3': (51.369,127.493,2.697)
OP2: (56.310,130.141,0.519)
C3': (52.627,126.919,2.362)
C1': (53.977,125.016,2.055)
C5': (53.182,127.873,0.058)
O6: (59.208,125.497,4.959)
O4': (53.825,125.641,0.793)
C8: (55.953,126.583,2.382)
C2: (56.737,122.958,4.704)
C6: (58.169,124.943,4.589)
C5: (57.169,125.438,3.705)
C4: (56.079,124.643,3.422)
P: (55.141,129.609,-0.240)
C4': (52.788,126.662,0.875)
C2': (52.849,125.536,2.953)
O2': (51.711,124.706,2.868)
N1: (57.860,123.667,5.050)
N2: (56.608,121.750,5.251)
N3: (55.803,123.404,3.879)
N7: (57.077,126.657,3.042)
N9: (55.285,125.394,2.584)
O5': (54.361,128.510,0.611)
O3': (51.369,127.493,2.697)
OP1: (58.714,124.366,14.629)
OP2: (58.163,126.837,14.139)
C3': (59.872,124.573,9.373)
C1': (58.623,125.964,7.934)
C5': (59.306,126.223,11.307)
O6: (56.364,130.570,4.765)
O4': (58.057,126.125,9.225)
C8: (59.277,128.202,6.889)
C2: (55.064,127.463,5.947)
C6: (56.359,129.453,5.322)
C5: (57.430,128.786,6.000)
C4: (57.192,127.555,6.579)
P: (58.388,125.446,13.653)
C4': (58.819,125.332,10.186)
C2': (60.071,125.522,8.188)
O2': (60.651,124.918,7.056)
N1: (55.192,128.693,5.344)
N2: (53.855,126.889,5.851)
N3: (56.046,126.842,6.594)
N7: (58.748,129.179,6.200)
N9: (58.386,127.188,7.163)
O5': (59.502,125.454,12.513)
O3': (59.262,123.319,8.991)
OP2: (58.163,126.837,14.139)
C3': (59.872,124.573,9.373)
C1': (58.623,125.964,7.934)
C5': (59.306,126.223,11.307)
O6: (56.364,130.570,4.765)
O4': (58.057,126.125,9.225)
C8: (59.277,128.202,6.889)
C2: (55.064,127.463,5.947)
C6: (56.359,129.453,5.322)
C5: (57.430,128.786,6.000)
C4: (57.192,127.555,6.579)
P: (58.388,125.446,13.653)
C4': (58.819,125.332,10.186)
C2': (60.071,125.522,8.188)
O2': (60.651,124.918,7.056)
N1: (55.192,128.693,5.344)
N2: (53.855,126.889,5.851)
N3: (56.046,126.842,6.594)
N7: (58.748,129.179,6.200)
N9: (58.386,127.188,7.163)
O5': (59.502,125.454,12.513)
O3': (59.262,123.319,8.991)
Image (generated by PyMOL):