Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A280:A346
Extra
PDB:
ATOM 1 O3' C A 279 55.873 128.651 -1.436 1.00 79.45 O
ATOM 2 P G A 280 55.308 129.482 -0.186 1.00 78.78 P
ATOM 3 OP1 G A 280 54.327 130.462 -0.720 1.00 79.25 O
ATOM 4 OP2 G A 280 56.462 129.969 0.625 1.00 79.12 O
ATOM 5 O5' G A 280 54.504 128.383 0.645 1.00 78.02 O
ATOM 6 C5' G A 280 53.322 127.761 0.093 1.00 75.83 C
ATOM 7 C4' G A 280 52.918 126.561 0.919 1.00 75.04 C
ATOM 8 O4' G A 280 53.926 125.514 0.818 1.00 73.50 O
ATOM 9 C3' G A 280 52.797 126.825 2.408 1.00 74.90 C
ATOM 10 O3' G A 280 51.560 127.440 2.761 1.00 76.51 O
ATOM 11 C2' G A 280 53.005 125.437 3.002 1.00 73.49 C
ATOM 12 O2' G A 280 51.863 124.602 2.950 1.00 73.17 O
ATOM 13 C1' G A 280 54.097 124.889 2.080 1.00 72.01 C
ATOM 14 N9 G A 280 55.423 125.242 2.580 1.00 69.74 N
ATOM 15 C8 G A 280 56.123 126.401 2.333 1.00 68.83 C
ATOM 16 N7 G A 280 57.267 126.454 2.963 1.00 68.51 N
ATOM 17 C5 G A 280 57.335 125.252 3.657 1.00 68.40 C
ATOM 18 C6 G A 280 58.345 124.741 4.522 1.00 67.71 C
ATOM 19 O6 G A 280 59.413 125.265 4.853 1.00 67.44 O
ATOM 20 N1 G A 280 58.007 123.486 5.016 1.00 66.43 N
ATOM 21 C2 G A 280 56.851 122.808 4.721 1.00 65.86 C
ATOM 22 N2 G A 280 56.703 121.615 5.298 1.00 65.32 N
ATOM 23 N3 G A 280 55.904 123.269 3.919 1.00 66.12 N
ATOM 24 C4 G A 280 56.209 124.488 3.425 1.00 68.37 C
ATOM 25 P A A 281 51.432 128.202 4.170 1.00 77.36 P
ATOM 26 OP1 A A 281 50.190 129.025 4.164 1.00 77.90 O
ATOM 27 OP2 A A 281 52.745 128.860 4.418 1.00 76.37 O
ATOM 28 O5' A A 281 51.225 126.996 5.193 1.00 76.35 O
TER
ATOM 1 O3' A B 345 57.266 124.821 12.871 1.00 72.25 O
ATOM 2 P G B 346 58.622 125.185 13.644 1.00 73.08 P
ATOM 3 OP1 G B 346 58.979 124.115 14.608 1.00 73.07 O
ATOM 4 OP2 G B 346 58.409 126.571 14.122 1.00 75.05 O
ATOM 5 O5' G B 346 59.734 125.202 12.506 1.00 74.34 O
ATOM 6 C5' G B 346 59.559 126.024 11.341 1.00 75.25 C
ATOM 7 C4' G B 346 59.035 125.190 10.199 1.00 75.36 C
ATOM 8 O4' G B 346 58.291 126.032 9.271 1.00 74.97 O
ATOM 9 C3' G B 346 60.063 124.431 9.363 1.00 75.55 C
ATOM 10 O3' G B 346 59.436 123.195 8.973 1.00 78.64 O
ATOM 11 C2' G B 346 60.261 125.394 8.189 1.00 74.03 C
ATOM 12 O2' G B 346 60.798 124.793 7.031 1.00 73.93 O
ATOM 13 C1' G B 346 58.821 125.869 7.969 1.00 73.67 C
ATOM 14 N9 G B 346 58.567 127.098 7.214 1.00 72.54 N
ATOM 15 C8 G B 346 59.431 128.140 6.958 1.00 71.80 C
ATOM 16 N7 G B 346 58.873 129.117 6.293 1.00 71.89 N
ATOM 17 C5 G B 346 57.564 128.695 6.091 1.00 72.67 C
ATOM 18 C6 G B 346 56.475 129.348 5.440 1.00 73.36 C
ATOM 19 O6 G B 346 56.446 130.475 4.920 1.00 73.97 O
ATOM 20 N1 G B 346 55.333 128.555 5.441 1.00 72.82 N
ATOM 21 C2 G B 346 55.243 127.305 6.002 1.00 72.18 C
ATOM 22 N2 G B 346 54.057 126.692 5.875 1.00 71.64 N
ATOM 23 N3 G B 346 56.240 126.697 6.632 1.00 71.69 N
ATOM 24 C4 G B 346 57.364 127.445 6.637 1.00 72.12 C
ATOM 25 P U B 347 60.257 122.059 8.167 1.00 79.94 P
ATOM 26 OP1 U B 347 61.613 121.862 8.765 1.00 78.90 O
ATOM 27 OP2 U B 347 60.126 122.385 6.722 1.00 80.86 O
ATOM 28 O5' U B 347 59.393 120.739 8.393 1.00 78.75 O
TER
ATOM 2 P G A 280 55.308 129.482 -0.186 1.00 78.78 P
ATOM 3 OP1 G A 280 54.327 130.462 -0.720 1.00 79.25 O
ATOM 4 OP2 G A 280 56.462 129.969 0.625 1.00 79.12 O
ATOM 5 O5' G A 280 54.504 128.383 0.645 1.00 78.02 O
ATOM 6 C5' G A 280 53.322 127.761 0.093 1.00 75.83 C
ATOM 7 C4' G A 280 52.918 126.561 0.919 1.00 75.04 C
ATOM 8 O4' G A 280 53.926 125.514 0.818 1.00 73.50 O
ATOM 9 C3' G A 280 52.797 126.825 2.408 1.00 74.90 C
ATOM 10 O3' G A 280 51.560 127.440 2.761 1.00 76.51 O
ATOM 11 C2' G A 280 53.005 125.437 3.002 1.00 73.49 C
ATOM 12 O2' G A 280 51.863 124.602 2.950 1.00 73.17 O
ATOM 13 C1' G A 280 54.097 124.889 2.080 1.00 72.01 C
ATOM 14 N9 G A 280 55.423 125.242 2.580 1.00 69.74 N
ATOM 15 C8 G A 280 56.123 126.401 2.333 1.00 68.83 C
ATOM 16 N7 G A 280 57.267 126.454 2.963 1.00 68.51 N
ATOM 17 C5 G A 280 57.335 125.252 3.657 1.00 68.40 C
ATOM 18 C6 G A 280 58.345 124.741 4.522 1.00 67.71 C
ATOM 19 O6 G A 280 59.413 125.265 4.853 1.00 67.44 O
ATOM 20 N1 G A 280 58.007 123.486 5.016 1.00 66.43 N
ATOM 21 C2 G A 280 56.851 122.808 4.721 1.00 65.86 C
ATOM 22 N2 G A 280 56.703 121.615 5.298 1.00 65.32 N
ATOM 23 N3 G A 280 55.904 123.269 3.919 1.00 66.12 N
ATOM 24 C4 G A 280 56.209 124.488 3.425 1.00 68.37 C
ATOM 25 P A A 281 51.432 128.202 4.170 1.00 77.36 P
ATOM 26 OP1 A A 281 50.190 129.025 4.164 1.00 77.90 O
ATOM 27 OP2 A A 281 52.745 128.860 4.418 1.00 76.37 O
ATOM 28 O5' A A 281 51.225 126.996 5.193 1.00 76.35 O
TER
ATOM 1 O3' A B 345 57.266 124.821 12.871 1.00 72.25 O
ATOM 2 P G B 346 58.622 125.185 13.644 1.00 73.08 P
ATOM 3 OP1 G B 346 58.979 124.115 14.608 1.00 73.07 O
ATOM 4 OP2 G B 346 58.409 126.571 14.122 1.00 75.05 O
ATOM 5 O5' G B 346 59.734 125.202 12.506 1.00 74.34 O
ATOM 6 C5' G B 346 59.559 126.024 11.341 1.00 75.25 C
ATOM 7 C4' G B 346 59.035 125.190 10.199 1.00 75.36 C
ATOM 8 O4' G B 346 58.291 126.032 9.271 1.00 74.97 O
ATOM 9 C3' G B 346 60.063 124.431 9.363 1.00 75.55 C
ATOM 10 O3' G B 346 59.436 123.195 8.973 1.00 78.64 O
ATOM 11 C2' G B 346 60.261 125.394 8.189 1.00 74.03 C
ATOM 12 O2' G B 346 60.798 124.793 7.031 1.00 73.93 O
ATOM 13 C1' G B 346 58.821 125.869 7.969 1.00 73.67 C
ATOM 14 N9 G B 346 58.567 127.098 7.214 1.00 72.54 N
ATOM 15 C8 G B 346 59.431 128.140 6.958 1.00 71.80 C
ATOM 16 N7 G B 346 58.873 129.117 6.293 1.00 71.89 N
ATOM 17 C5 G B 346 57.564 128.695 6.091 1.00 72.67 C
ATOM 18 C6 G B 346 56.475 129.348 5.440 1.00 73.36 C
ATOM 19 O6 G B 346 56.446 130.475 4.920 1.00 73.97 O
ATOM 20 N1 G B 346 55.333 128.555 5.441 1.00 72.82 N
ATOM 21 C2 G B 346 55.243 127.305 6.002 1.00 72.18 C
ATOM 22 N2 G B 346 54.057 126.692 5.875 1.00 71.64 N
ATOM 23 N3 G B 346 56.240 126.697 6.632 1.00 71.69 N
ATOM 24 C4 G B 346 57.364 127.445 6.637 1.00 72.12 C
ATOM 25 P U B 347 60.257 122.059 8.167 1.00 79.94 P
ATOM 26 OP1 U B 347 61.613 121.862 8.765 1.00 78.90 O
ATOM 27 OP2 U B 347 60.126 122.385 6.722 1.00 80.86 O
ATOM 28 O5' U B 347 59.393 120.739 8.393 1.00 78.75 O
TER
Atoms:
OP1: (54.327,130.462,-0.720)
OP2: (56.462,129.969,0.625)
C3': (52.797,126.825,2.408)
C1': (54.097,124.889,2.080)
C5': (53.322,127.761,0.093)
O6: (59.413,125.265,4.853)
O4': (53.926,125.514,0.818)
C8: (56.123,126.401,2.333)
C2: (56.851,122.808,4.721)
C6: (58.345,124.741,4.522)
C5: (57.335,125.252,3.657)
C4: (56.209,124.488,3.425)
P: (55.308,129.482,-0.186)
C4': (52.918,126.561,0.919)
C2': (53.005,125.437,3.002)
O2': (51.863,124.602,2.950)
N1: (58.007,123.486,5.016)
N2: (56.703,121.615,5.298)
N3: (55.904,123.269,3.919)
N7: (57.267,126.454,2.963)
N9: (55.423,125.242,2.580)
O5': (54.504,128.383,0.645)
O3': (51.560,127.440,2.761)
OP2: (56.462,129.969,0.625)
C3': (52.797,126.825,2.408)
C1': (54.097,124.889,2.080)
C5': (53.322,127.761,0.093)
O6: (59.413,125.265,4.853)
O4': (53.926,125.514,0.818)
C8: (56.123,126.401,2.333)
C2: (56.851,122.808,4.721)
C6: (58.345,124.741,4.522)
C5: (57.335,125.252,3.657)
C4: (56.209,124.488,3.425)
P: (55.308,129.482,-0.186)
C4': (52.918,126.561,0.919)
C2': (53.005,125.437,3.002)
O2': (51.863,124.602,2.950)
N1: (58.007,123.486,5.016)
N2: (56.703,121.615,5.298)
N3: (55.904,123.269,3.919)
N7: (57.267,126.454,2.963)
N9: (55.423,125.242,2.580)
O5': (54.504,128.383,0.645)
O3': (51.560,127.440,2.761)
OP1: (58.979,124.115,14.608)
OP2: (58.409,126.571,14.122)
C3': (60.063,124.431,9.363)
C1': (58.821,125.869,7.969)
C5': (59.559,126.024,11.341)
O6: (56.446,130.475,4.920)
O4': (58.291,126.032,9.271)
C8: (59.431,128.140,6.958)
C2: (55.243,127.305,6.002)
C6: (56.475,129.348,5.440)
C5: (57.564,128.695,6.091)
C4: (57.364,127.445,6.637)
P: (58.622,125.185,13.644)
C4': (59.035,125.190,10.199)
C2': (60.261,125.394,8.189)
O2': (60.798,124.793,7.031)
N1: (55.333,128.555,5.441)
N2: (54.057,126.692,5.875)
N3: (56.240,126.697,6.632)
N7: (58.873,129.117,6.293)
N9: (58.567,127.098,7.214)
O5': (59.734,125.202,12.506)
O3': (59.436,123.195,8.973)
OP2: (58.409,126.571,14.122)
C3': (60.063,124.431,9.363)
C1': (58.821,125.869,7.969)
C5': (59.559,126.024,11.341)
O6: (56.446,130.475,4.920)
O4': (58.291,126.032,9.271)
C8: (59.431,128.140,6.958)
C2: (55.243,127.305,6.002)
C6: (56.475,129.348,5.440)
C5: (57.564,128.695,6.091)
C4: (57.364,127.445,6.637)
P: (58.622,125.185,13.644)
C4': (59.035,125.190,10.199)
C2': (60.261,125.394,8.189)
O2': (60.798,124.793,7.031)
N1: (55.333,128.555,5.441)
N2: (54.057,126.692,5.875)
N3: (56.240,126.697,6.632)
N7: (58.873,129.117,6.293)
N9: (58.567,127.098,7.214)
O5': (59.734,125.202,12.506)
O3': (59.436,123.195,8.973)
Image (generated by PyMOL):