Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01310:01312
Extra
PDB:
ATOM 1 O3' U A1309 34.439 111.829 51.041 1.00 43.11 O
ATOM 2 P G A1310 35.518 111.165 52.047 1.00 48.39 P
ATOM 3 OP1 G A1310 36.703 110.841 51.214 1.00 47.44 O
ATOM 4 OP2 G A1310 34.903 110.099 52.888 1.00 46.41 O
ATOM 5 O5' G A1310 35.908 112.371 53.005 1.00 44.51 O
ATOM 6 C5' G A1310 36.201 113.648 52.441 1.00 41.90 C
ATOM 7 C4' G A1310 36.054 114.732 53.473 1.00 40.41 C
ATOM 8 O4' G A1310 34.686 114.760 53.967 1.00 39.87 O
ATOM 9 C3' G A1310 36.954 114.636 54.697 1.00 38.77 C
ATOM 10 O3' G A1310 37.337 115.950 55.068 1.00 38.94 O
ATOM 11 C2' G A1310 36.012 114.088 55.758 1.00 38.09 C
ATOM 12 O2' G A1310 36.397 114.455 57.068 1.00 40.85 O
ATOM 13 C1' G A1310 34.708 114.780 55.372 1.00 37.23 C
ATOM 14 N9 G A1310 33.508 114.125 55.880 1.00 34.30 N
ATOM 15 C8 G A1310 33.164 112.800 55.775 1.00 34.60 C
ATOM 16 N7 G A1310 32.084 112.501 56.441 1.00 32.98 N
ATOM 17 C5 G A1310 31.682 113.705 56.994 1.00 31.05 C
ATOM 18 C6 G A1310 30.610 113.996 57.855 1.00 30.83 C
ATOM 19 O6 G A1310 29.780 113.221 58.331 1.00 32.38 O
ATOM 20 N1 G A1310 30.567 115.345 58.181 1.00 32.06 N
ATOM 21 C2 G A1310 31.464 116.290 57.745 1.00 32.67 C
ATOM 22 N2 G A1310 31.279 117.545 58.185 1.00 31.34 N
ATOM 23 N3 G A1310 32.475 116.023 56.946 1.00 31.59 N
ATOM 24 C4 G A1310 32.528 114.721 56.621 1.00 31.44 C
ATOM 25 P A A1311 38.550 116.675 54.303 1.00 39.55 P
ATOM 26 OP1 A A1311 37.932 117.670 53.383 1.00 37.74 O
ATOM 27 OP2 A A1311 39.478 115.655 53.753 1.00 39.08 O
ATOM 28 O5' A A1311 39.308 117.463 55.463 1.00 38.31 O
TER
ATOM 1 O3' A B1311 37.603 118.606 58.868 1.00 48.09 O
ATOM 2 P C B1312 37.762 117.354 59.873 1.00 50.39 P
ATOM 3 OP1 C B1312 38.747 117.720 60.941 1.00 45.28 O
ATOM 4 OP2 C B1312 37.923 116.074 59.120 1.00 48.90 O
ATOM 5 O5' C B1312 36.322 117.320 60.548 1.00 46.10 O
ATOM 6 C5' C B1312 35.611 118.544 60.808 1.00 39.00 C
ATOM 7 C4' C B1312 34.379 118.260 61.617 1.00 35.64 C
ATOM 8 O4' C B1312 33.379 117.626 60.791 1.00 34.30 O
ATOM 9 C3' C B1312 34.593 117.307 62.781 1.00 33.68 C
ATOM 10 O3' C B1312 35.073 118.060 63.886 1.00 31.39 O
ATOM 11 C2' C B1312 33.194 116.753 62.999 1.00 33.46 C
ATOM 12 O2' C B1312 32.375 117.651 63.710 1.00 37.06 O
ATOM 13 C1' C B1312 32.677 116.668 61.559 1.00 33.40 C
ATOM 14 N1 C B1312 32.871 115.352 60.939 1.00 31.28 N
ATOM 15 C2 C B1312 32.079 114.292 61.362 1.00 29.51 C
ATOM 16 O2 C B1312 31.240 114.493 62.244 1.00 29.35 O
ATOM 17 N3 C B1312 32.247 113.076 60.802 1.00 30.89 N
ATOM 18 C4 C B1312 33.164 112.902 59.850 1.00 31.09 C
ATOM 19 N4 C B1312 33.292 111.688 59.316 1.00 29.28 N
ATOM 20 C5 C B1312 33.990 113.968 59.398 1.00 32.60 C
ATOM 21 C6 C B1312 33.811 115.165 59.963 1.00 31.79 C
ATOM 22 P G B1313 35.612 117.328 65.203 1.00 29.09 P
ATOM 23 OP1 G B1313 36.884 118.019 65.557 1.00 28.56 O
ATOM 24 OP2 G B1313 35.603 115.858 65.011 1.00 27.18 O
ATOM 25 O5' G B1313 34.528 117.744 66.290 1.00 27.19 O
TER
ATOM 2 P G A1310 35.518 111.165 52.047 1.00 48.39 P
ATOM 3 OP1 G A1310 36.703 110.841 51.214 1.00 47.44 O
ATOM 4 OP2 G A1310 34.903 110.099 52.888 1.00 46.41 O
ATOM 5 O5' G A1310 35.908 112.371 53.005 1.00 44.51 O
ATOM 6 C5' G A1310 36.201 113.648 52.441 1.00 41.90 C
ATOM 7 C4' G A1310 36.054 114.732 53.473 1.00 40.41 C
ATOM 8 O4' G A1310 34.686 114.760 53.967 1.00 39.87 O
ATOM 9 C3' G A1310 36.954 114.636 54.697 1.00 38.77 C
ATOM 10 O3' G A1310 37.337 115.950 55.068 1.00 38.94 O
ATOM 11 C2' G A1310 36.012 114.088 55.758 1.00 38.09 C
ATOM 12 O2' G A1310 36.397 114.455 57.068 1.00 40.85 O
ATOM 13 C1' G A1310 34.708 114.780 55.372 1.00 37.23 C
ATOM 14 N9 G A1310 33.508 114.125 55.880 1.00 34.30 N
ATOM 15 C8 G A1310 33.164 112.800 55.775 1.00 34.60 C
ATOM 16 N7 G A1310 32.084 112.501 56.441 1.00 32.98 N
ATOM 17 C5 G A1310 31.682 113.705 56.994 1.00 31.05 C
ATOM 18 C6 G A1310 30.610 113.996 57.855 1.00 30.83 C
ATOM 19 O6 G A1310 29.780 113.221 58.331 1.00 32.38 O
ATOM 20 N1 G A1310 30.567 115.345 58.181 1.00 32.06 N
ATOM 21 C2 G A1310 31.464 116.290 57.745 1.00 32.67 C
ATOM 22 N2 G A1310 31.279 117.545 58.185 1.00 31.34 N
ATOM 23 N3 G A1310 32.475 116.023 56.946 1.00 31.59 N
ATOM 24 C4 G A1310 32.528 114.721 56.621 1.00 31.44 C
ATOM 25 P A A1311 38.550 116.675 54.303 1.00 39.55 P
ATOM 26 OP1 A A1311 37.932 117.670 53.383 1.00 37.74 O
ATOM 27 OP2 A A1311 39.478 115.655 53.753 1.00 39.08 O
ATOM 28 O5' A A1311 39.308 117.463 55.463 1.00 38.31 O
TER
ATOM 1 O3' A B1311 37.603 118.606 58.868 1.00 48.09 O
ATOM 2 P C B1312 37.762 117.354 59.873 1.00 50.39 P
ATOM 3 OP1 C B1312 38.747 117.720 60.941 1.00 45.28 O
ATOM 4 OP2 C B1312 37.923 116.074 59.120 1.00 48.90 O
ATOM 5 O5' C B1312 36.322 117.320 60.548 1.00 46.10 O
ATOM 6 C5' C B1312 35.611 118.544 60.808 1.00 39.00 C
ATOM 7 C4' C B1312 34.379 118.260 61.617 1.00 35.64 C
ATOM 8 O4' C B1312 33.379 117.626 60.791 1.00 34.30 O
ATOM 9 C3' C B1312 34.593 117.307 62.781 1.00 33.68 C
ATOM 10 O3' C B1312 35.073 118.060 63.886 1.00 31.39 O
ATOM 11 C2' C B1312 33.194 116.753 62.999 1.00 33.46 C
ATOM 12 O2' C B1312 32.375 117.651 63.710 1.00 37.06 O
ATOM 13 C1' C B1312 32.677 116.668 61.559 1.00 33.40 C
ATOM 14 N1 C B1312 32.871 115.352 60.939 1.00 31.28 N
ATOM 15 C2 C B1312 32.079 114.292 61.362 1.00 29.51 C
ATOM 16 O2 C B1312 31.240 114.493 62.244 1.00 29.35 O
ATOM 17 N3 C B1312 32.247 113.076 60.802 1.00 30.89 N
ATOM 18 C4 C B1312 33.164 112.902 59.850 1.00 31.09 C
ATOM 19 N4 C B1312 33.292 111.688 59.316 1.00 29.28 N
ATOM 20 C5 C B1312 33.990 113.968 59.398 1.00 32.60 C
ATOM 21 C6 C B1312 33.811 115.165 59.963 1.00 31.79 C
ATOM 22 P G B1313 35.612 117.328 65.203 1.00 29.09 P
ATOM 23 OP1 G B1313 36.884 118.019 65.557 1.00 28.56 O
ATOM 24 OP2 G B1313 35.603 115.858 65.011 1.00 27.18 O
ATOM 25 O5' G B1313 34.528 117.744 66.290 1.00 27.19 O
TER
Atoms:
OP1: (36.703,110.841,51.214)
OP2: (34.903,110.099,52.888)
C3': (36.954,114.636,54.697)
C1': (34.708,114.780,55.372)
C5': (36.201,113.648,52.441)
O6: (29.780,113.221,58.331)
O4': (34.686,114.760,53.967)
C8: (33.164,112.800,55.775)
C2: (31.464,116.290,57.745)
C6: (30.610,113.996,57.855)
C5: (31.682,113.705,56.994)
C4: (32.528,114.721,56.621)
P: (35.518,111.165,52.047)
C4': (36.054,114.732,53.473)
C2': (36.012,114.088,55.758)
O2': (36.397,114.455,57.068)
N1: (30.567,115.345,58.181)
N2: (31.279,117.545,58.185)
N3: (32.475,116.023,56.946)
N7: (32.084,112.501,56.441)
N9: (33.508,114.125,55.880)
O5': (35.908,112.371,53.005)
O3': (37.337,115.950,55.068)
OP2: (34.903,110.099,52.888)
C3': (36.954,114.636,54.697)
C1': (34.708,114.780,55.372)
C5': (36.201,113.648,52.441)
O6: (29.780,113.221,58.331)
O4': (34.686,114.760,53.967)
C8: (33.164,112.800,55.775)
C2: (31.464,116.290,57.745)
C6: (30.610,113.996,57.855)
C5: (31.682,113.705,56.994)
C4: (32.528,114.721,56.621)
P: (35.518,111.165,52.047)
C4': (36.054,114.732,53.473)
C2': (36.012,114.088,55.758)
O2': (36.397,114.455,57.068)
N1: (30.567,115.345,58.181)
N2: (31.279,117.545,58.185)
N3: (32.475,116.023,56.946)
N7: (32.084,112.501,56.441)
N9: (33.508,114.125,55.880)
O5': (35.908,112.371,53.005)
O3': (37.337,115.950,55.068)
C2: (32.079,114.292,61.362)
OP1: (38.747,117.720,60.941)
OP2: (37.923,116.074,59.120)
C4: (33.164,112.902,59.850)
O5': (36.322,117.320,60.548)
C3': (34.593,117.307,62.781)
C1': (32.677,116.668,61.559)
O4': (33.379,117.626,60.791)
C5': (35.611,118.544,60.808)
P: (37.762,117.354,59.873)
O2: (31.240,114.493,62.244)
C4': (34.379,118.260,61.617)
C2': (33.194,116.753,62.999)
O2': (32.375,117.651,63.710)
N1: (32.871,115.352,60.939)
N3: (32.247,113.076,60.802)
N4: (33.292,111.688,59.316)
C6: (33.811,115.165,59.963)
C5: (33.990,113.968,59.398)
O3': (35.073,118.060,63.886)
OP1: (38.747,117.720,60.941)
OP2: (37.923,116.074,59.120)
C4: (33.164,112.902,59.850)
O5': (36.322,117.320,60.548)
C3': (34.593,117.307,62.781)
C1': (32.677,116.668,61.559)
O4': (33.379,117.626,60.791)
C5': (35.611,118.544,60.808)
P: (37.762,117.354,59.873)
O2: (31.240,114.493,62.244)
C4': (34.379,118.260,61.617)
C2': (33.194,116.753,62.999)
O2': (32.375,117.651,63.710)
N1: (32.871,115.352,60.939)
N3: (32.247,113.076,60.802)
N4: (33.292,111.688,59.316)
C6: (33.811,115.165,59.963)
C5: (33.990,113.968,59.398)
O3': (35.073,118.060,63.886)
Image (generated by PyMOL):