Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MSY:A8:A17
Extra
PDB:
ATOM 1 O3' A A 7 12.089 23.088 4.892 1.00 10.56 O
ATOM 2 P G A 8 11.778 24.322 3.910 1.00 11.36 P
ATOM 3 OP1 G A 8 12.086 23.961 2.521 1.00 12.05 O
ATOM 4 OP2 G A 8 12.342 25.559 4.488 1.00 12.96 O
ATOM 5 O5' G A 8 10.200 24.439 4.183 1.00 11.60 O
ATOM 6 C5' G A 8 9.209 23.843 3.356 1.00 11.29 C
ATOM 7 C4' G A 8 8.904 22.461 3.919 1.00 10.95 C
ATOM 8 O4' G A 8 8.323 22.592 5.249 1.00 11.09 O
ATOM 9 C3' G A 8 7.823 21.778 3.069 1.00 10.77 C
ATOM 10 O3' G A 8 8.096 20.385 3.146 1.00 10.36 O
ATOM 11 C2' G A 8 6.557 22.132 3.861 1.00 10.93 C
ATOM 12 O2' G A 8 5.495 21.256 3.523 1.00 11.39 O
ATOM 13 C1' G A 8 7.088 21.850 5.267 1.00 10.88 C
ATOM 14 N9 G A 8 6.289 22.329 6.396 1.00 11.02 N
ATOM 15 C8 G A 8 5.401 23.368 6.467 1.00 11.43 C
ATOM 16 N7 G A 8 4.848 23.497 7.662 1.00 11.53 N
ATOM 17 C5 G A 8 5.417 22.484 8.420 1.00 11.14 C
ATOM 18 C6 G A 8 5.241 22.102 9.774 1.00 11.17 C
ATOM 19 O6 G A 8 4.474 22.643 10.648 1.00 12.50 O
ATOM 20 N1 G A 8 6.010 20.989 10.147 1.00 10.75 N
ATOM 21 C2 G A 8 6.851 20.355 9.270 1.00 10.51 C
ATOM 22 N2 G A 8 7.552 19.290 9.719 1.00 10.24 N
ATOM 23 N3 G A 8 7.021 20.704 8.001 1.00 10.52 N
ATOM 24 C4 G A 8 6.291 21.763 7.646 1.00 10.82 C
ATOM 25 P U A 9 7.400 19.329 2.173 1.00 10.55 P
ATOM 26 OP1 U A 9 6.999 20.027 0.926 1.00 11.06 O
ATOM 27 OP2 U A 9 6.422 18.542 2.959 1.00 11.09 O
ATOM 28 O5' U A 9 8.603 18.332 1.895 1.00 10.41 O
TER
ATOM 1 O3' G B 16 -0.356 18.050 13.106 1.00 8.81 O
ATOM 2 P G B 17 0.865 19.081 13.318 1.00 8.92 P
ATOM 3 OP1 G B 17 0.992 19.231 14.788 1.00 9.42 O
ATOM 4 OP2 G B 17 0.675 20.262 12.452 1.00 9.66 O
ATOM 5 O5' G B 17 2.125 18.311 12.704 1.00 8.68 O
ATOM 6 C5' G B 17 2.570 17.050 13.254 1.00 8.66 C
ATOM 7 C4' G B 17 3.671 16.448 12.391 1.00 8.65 C
ATOM 8 O4' G B 17 3.150 16.175 11.066 1.00 8.76 O
ATOM 9 C3' G B 17 4.858 17.372 12.084 1.00 8.71 C
ATOM 10 O3' G B 17 5.714 17.445 13.215 1.00 9.07 O
ATOM 11 C2' G B 17 5.475 16.663 10.885 1.00 8.66 C
ATOM 12 O2' G B 17 5.998 15.391 11.215 1.00 8.82 O
ATOM 13 C1' G B 17 4.185 16.403 10.097 1.00 8.81 C
ATOM 14 N9 G B 17 3.817 17.505 9.235 1.00 9.08 N
ATOM 15 C8 G B 17 2.862 18.472 9.492 1.00 9.32 C
ATOM 16 N7 G B 17 2.781 19.330 8.502 1.00 9.64 N
ATOM 17 C5 G B 17 3.706 18.921 7.570 1.00 9.55 C
ATOM 18 C6 G B 17 4.067 19.462 6.310 1.00 10.00 C
ATOM 19 O6 G B 17 3.526 20.496 5.784 1.00 11.78 O
ATOM 20 N1 G B 17 5.062 18.735 5.675 1.00 9.78 N
ATOM 21 C2 G B 17 5.652 17.616 6.205 1.00 9.34 C
ATOM 22 N2 G B 17 6.611 17.026 5.476 1.00 9.41 N
ATOM 23 N3 G B 17 5.358 17.087 7.386 1.00 9.00 N
ATOM 24 C4 G B 17 4.380 17.804 7.999 1.00 9.17 C
ATOM 25 P A B 18 6.710 18.689 13.349 1.00 9.23 P
ATOM 26 OP1 A B 18 7.117 18.707 14.773 1.00 10.16 O
ATOM 27 OP2 A B 18 6.140 19.885 12.682 1.00 9.51 O
ATOM 28 O5' A B 18 7.926 18.273 12.395 1.00 9.05 O
TER
ATOM 2 P G A 8 11.778 24.322 3.910 1.00 11.36 P
ATOM 3 OP1 G A 8 12.086 23.961 2.521 1.00 12.05 O
ATOM 4 OP2 G A 8 12.342 25.559 4.488 1.00 12.96 O
ATOM 5 O5' G A 8 10.200 24.439 4.183 1.00 11.60 O
ATOM 6 C5' G A 8 9.209 23.843 3.356 1.00 11.29 C
ATOM 7 C4' G A 8 8.904 22.461 3.919 1.00 10.95 C
ATOM 8 O4' G A 8 8.323 22.592 5.249 1.00 11.09 O
ATOM 9 C3' G A 8 7.823 21.778 3.069 1.00 10.77 C
ATOM 10 O3' G A 8 8.096 20.385 3.146 1.00 10.36 O
ATOM 11 C2' G A 8 6.557 22.132 3.861 1.00 10.93 C
ATOM 12 O2' G A 8 5.495 21.256 3.523 1.00 11.39 O
ATOM 13 C1' G A 8 7.088 21.850 5.267 1.00 10.88 C
ATOM 14 N9 G A 8 6.289 22.329 6.396 1.00 11.02 N
ATOM 15 C8 G A 8 5.401 23.368 6.467 1.00 11.43 C
ATOM 16 N7 G A 8 4.848 23.497 7.662 1.00 11.53 N
ATOM 17 C5 G A 8 5.417 22.484 8.420 1.00 11.14 C
ATOM 18 C6 G A 8 5.241 22.102 9.774 1.00 11.17 C
ATOM 19 O6 G A 8 4.474 22.643 10.648 1.00 12.50 O
ATOM 20 N1 G A 8 6.010 20.989 10.147 1.00 10.75 N
ATOM 21 C2 G A 8 6.851 20.355 9.270 1.00 10.51 C
ATOM 22 N2 G A 8 7.552 19.290 9.719 1.00 10.24 N
ATOM 23 N3 G A 8 7.021 20.704 8.001 1.00 10.52 N
ATOM 24 C4 G A 8 6.291 21.763 7.646 1.00 10.82 C
ATOM 25 P U A 9 7.400 19.329 2.173 1.00 10.55 P
ATOM 26 OP1 U A 9 6.999 20.027 0.926 1.00 11.06 O
ATOM 27 OP2 U A 9 6.422 18.542 2.959 1.00 11.09 O
ATOM 28 O5' U A 9 8.603 18.332 1.895 1.00 10.41 O
TER
ATOM 1 O3' G B 16 -0.356 18.050 13.106 1.00 8.81 O
ATOM 2 P G B 17 0.865 19.081 13.318 1.00 8.92 P
ATOM 3 OP1 G B 17 0.992 19.231 14.788 1.00 9.42 O
ATOM 4 OP2 G B 17 0.675 20.262 12.452 1.00 9.66 O
ATOM 5 O5' G B 17 2.125 18.311 12.704 1.00 8.68 O
ATOM 6 C5' G B 17 2.570 17.050 13.254 1.00 8.66 C
ATOM 7 C4' G B 17 3.671 16.448 12.391 1.00 8.65 C
ATOM 8 O4' G B 17 3.150 16.175 11.066 1.00 8.76 O
ATOM 9 C3' G B 17 4.858 17.372 12.084 1.00 8.71 C
ATOM 10 O3' G B 17 5.714 17.445 13.215 1.00 9.07 O
ATOM 11 C2' G B 17 5.475 16.663 10.885 1.00 8.66 C
ATOM 12 O2' G B 17 5.998 15.391 11.215 1.00 8.82 O
ATOM 13 C1' G B 17 4.185 16.403 10.097 1.00 8.81 C
ATOM 14 N9 G B 17 3.817 17.505 9.235 1.00 9.08 N
ATOM 15 C8 G B 17 2.862 18.472 9.492 1.00 9.32 C
ATOM 16 N7 G B 17 2.781 19.330 8.502 1.00 9.64 N
ATOM 17 C5 G B 17 3.706 18.921 7.570 1.00 9.55 C
ATOM 18 C6 G B 17 4.067 19.462 6.310 1.00 10.00 C
ATOM 19 O6 G B 17 3.526 20.496 5.784 1.00 11.78 O
ATOM 20 N1 G B 17 5.062 18.735 5.675 1.00 9.78 N
ATOM 21 C2 G B 17 5.652 17.616 6.205 1.00 9.34 C
ATOM 22 N2 G B 17 6.611 17.026 5.476 1.00 9.41 N
ATOM 23 N3 G B 17 5.358 17.087 7.386 1.00 9.00 N
ATOM 24 C4 G B 17 4.380 17.804 7.999 1.00 9.17 C
ATOM 25 P A B 18 6.710 18.689 13.349 1.00 9.23 P
ATOM 26 OP1 A B 18 7.117 18.707 14.773 1.00 10.16 O
ATOM 27 OP2 A B 18 6.140 19.885 12.682 1.00 9.51 O
ATOM 28 O5' A B 18 7.926 18.273 12.395 1.00 9.05 O
TER
Atoms:
OP1: (12.086,23.961,2.521)
OP2: (12.342,25.559,4.488)
C3': (7.823,21.778,3.069)
C1': (7.088,21.850,5.267)
C5': (9.209,23.843,3.356)
O6: (4.474,22.643,10.648)
O4': (8.323,22.592,5.249)
C8: (5.401,23.368,6.467)
C2: (6.851,20.355,9.270)
C6: (5.241,22.102,9.774)
C5: (5.417,22.484,8.420)
C4: (6.291,21.763,7.646)
P: (11.778,24.322,3.910)
C4': (8.904,22.461,3.919)
C2': (6.557,22.132,3.861)
O2': (5.495,21.256,3.523)
N1: (6.010,20.989,10.147)
N2: (7.552,19.290,9.719)
N3: (7.021,20.704,8.001)
N7: (4.848,23.497,7.662)
N9: (6.289,22.329,6.396)
O5': (10.200,24.439,4.183)
O3': (8.096,20.385,3.146)
OP2: (12.342,25.559,4.488)
C3': (7.823,21.778,3.069)
C1': (7.088,21.850,5.267)
C5': (9.209,23.843,3.356)
O6: (4.474,22.643,10.648)
O4': (8.323,22.592,5.249)
C8: (5.401,23.368,6.467)
C2: (6.851,20.355,9.270)
C6: (5.241,22.102,9.774)
C5: (5.417,22.484,8.420)
C4: (6.291,21.763,7.646)
P: (11.778,24.322,3.910)
C4': (8.904,22.461,3.919)
C2': (6.557,22.132,3.861)
O2': (5.495,21.256,3.523)
N1: (6.010,20.989,10.147)
N2: (7.552,19.290,9.719)
N3: (7.021,20.704,8.001)
N7: (4.848,23.497,7.662)
N9: (6.289,22.329,6.396)
O5': (10.200,24.439,4.183)
O3': (8.096,20.385,3.146)
OP1: (0.992,19.231,14.788)
OP2: (0.675,20.262,12.452)
C3': (4.858,17.372,12.084)
C1': (4.185,16.403,10.097)
C5': (2.570,17.050,13.254)
O6: (3.526,20.496,5.784)
O4': (3.150,16.175,11.066)
C8: (2.862,18.472,9.492)
C2: (5.652,17.616,6.205)
C6: (4.067,19.462,6.310)
C5: (3.706,18.921,7.570)
C4: (4.380,17.804,7.999)
P: (0.865,19.081,13.318)
C4': (3.671,16.448,12.391)
C2': (5.475,16.663,10.885)
O2': (5.998,15.391,11.215)
N1: (5.062,18.735,5.675)
N2: (6.611,17.026,5.476)
N3: (5.358,17.087,7.386)
N7: (2.781,19.330,8.502)
N9: (3.817,17.505,9.235)
O5': (2.125,18.311,12.704)
O3': (5.714,17.445,13.215)
OP2: (0.675,20.262,12.452)
C3': (4.858,17.372,12.084)
C1': (4.185,16.403,10.097)
C5': (2.570,17.050,13.254)
O6: (3.526,20.496,5.784)
O4': (3.150,16.175,11.066)
C8: (2.862,18.472,9.492)
C2: (5.652,17.616,6.205)
C6: (4.067,19.462,6.310)
C5: (3.706,18.921,7.570)
C4: (4.380,17.804,7.999)
P: (0.865,19.081,13.318)
C4': (3.671,16.448,12.391)
C2': (5.475,16.663,10.885)
O2': (5.998,15.391,11.215)
N1: (5.062,18.735,5.675)
N2: (6.611,17.026,5.476)
N3: (5.358,17.087,7.386)
N7: (2.781,19.330,8.502)
N9: (3.817,17.505,9.235)
O5': (2.125,18.311,12.704)
O3': (5.714,17.445,13.215)
Image (generated by PyMOL):