Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A280:A346
Extra
PDB:
ATOM 1 O3' C A 279 55.299 128.872 -1.943 1.00 65.57 O
ATOM 2 P G A 280 54.665 129.683 -0.710 1.00 66.20 P
ATOM 3 OP1 G A 280 53.642 130.631 -1.228 1.00 66.30 O
ATOM 4 OP2 G A 280 55.797 130.203 0.095 1.00 67.89 O
ATOM 5 O5' G A 280 53.911 128.559 0.127 1.00 65.97 O
ATOM 6 C5' G A 280 52.745 127.898 -0.411 1.00 65.49 C
ATOM 7 C4' G A 280 52.379 126.708 0.444 1.00 65.04 C
ATOM 8 O4' G A 280 53.445 125.717 0.383 1.00 64.38 O
ATOM 9 C3' G A 280 52.250 126.998 1.931 1.00 65.43 C
ATOM 10 O3' G A 280 51.011 127.597 2.283 1.00 68.34 O
ATOM 11 C2' G A 280 52.468 125.622 2.538 1.00 63.54 C
ATOM 12 O2' G A 280 51.346 124.775 2.408 1.00 61.91 O
ATOM 13 C1' G A 280 53.602 125.107 1.655 1.00 62.46 C
ATOM 14 N9 G A 280 54.902 125.503 2.190 1.00 61.66 N
ATOM 15 C8 G A 280 55.562 126.698 1.995 1.00 61.04 C
ATOM 16 N7 G A 280 56.708 126.758 2.617 1.00 60.65 N
ATOM 17 C5 G A 280 56.815 125.530 3.256 1.00 60.80 C
ATOM 18 C6 G A 280 57.845 125.007 4.080 1.00 60.65 C
ATOM 19 O6 G A 280 58.914 125.537 4.407 1.00 61.12 O
ATOM 20 N1 G A 280 57.536 123.726 4.532 1.00 60.73 N
ATOM 21 C2 G A 280 56.388 123.035 4.226 1.00 60.55 C
ATOM 22 N2 G A 280 56.263 121.814 4.764 1.00 60.76 N
ATOM 23 N3 G A 280 55.430 123.505 3.450 1.00 60.19 N
ATOM 24 C4 G A 280 55.705 124.747 3.005 1.00 60.87 C
ATOM 25 P A A 281 50.882 128.375 3.684 1.00 70.84 P
ATOM 26 OP1 A A 281 49.624 129.171 3.643 1.00 70.99 O
ATOM 27 OP2 A A 281 52.178 129.058 3.950 1.00 70.91 O
ATOM 28 O5' A A 281 50.713 127.192 4.743 1.00 69.91 O
TER
ATOM 1 O3' A B 345 56.756 125.068 12.480 1.00 62.60 O
ATOM 2 P G B 346 58.126 125.444 13.243 1.00 63.79 P
ATOM 3 OP1 G B 346 58.521 124.342 14.160 1.00 63.81 O
ATOM 4 OP2 G B 346 57.942 126.816 13.781 1.00 63.95 O
ATOM 5 O5' G B 346 59.204 125.482 12.070 1.00 64.79 O
ATOM 6 C5' G B 346 58.966 126.263 10.879 1.00 65.72 C
ATOM 7 C4' G B 346 58.462 125.373 9.760 1.00 66.01 C
ATOM 8 O4' G B 346 57.714 126.177 8.809 1.00 65.58 O
ATOM 9 C3' G B 346 59.497 124.607 8.933 1.00 66.77 C
ATOM 10 O3' G B 346 58.854 123.397 8.489 1.00 68.49 O
ATOM 11 C2' G B 346 59.719 125.571 7.768 1.00 66.35 C
ATOM 12 O2' G B 346 60.289 124.988 6.615 1.00 67.25 O
ATOM 13 C1' G B 346 58.279 126.026 7.522 1.00 65.52 C
ATOM 14 N9 G B 346 58.053 127.263 6.785 1.00 64.96 N
ATOM 15 C8 G B 346 58.926 128.305 6.576 1.00 65.52 C
ATOM 16 N7 G B 346 58.393 129.291 5.907 1.00 65.75 N
ATOM 17 C5 G B 346 57.095 128.869 5.650 1.00 65.41 C
ATOM 18 C6 G B 346 56.035 129.519 4.962 1.00 65.57 C
ATOM 19 O6 G B 346 56.033 130.637 4.422 1.00 66.93 O
ATOM 20 N1 G B 346 54.886 128.733 4.937 1.00 65.24 N
ATOM 21 C2 G B 346 54.771 127.481 5.501 1.00 64.97 C
ATOM 22 N2 G B 346 53.573 126.880 5.383 1.00 64.42 N
ATOM 23 N3 G B 346 55.754 126.867 6.138 1.00 64.38 N
ATOM 24 C4 G B 346 56.876 127.615 6.177 1.00 64.72 C
ATOM 25 P U B 347 59.675 122.282 7.659 1.00 69.84 P
ATOM 26 OP1 U B 347 61.031 122.127 8.265 1.00 69.88 O
ATOM 27 OP2 U B 347 59.547 122.602 6.213 1.00 70.00 O
ATOM 28 O5' U B 347 58.847 120.940 7.896 1.00 67.99 O
TER
ATOM 2 P G A 280 54.665 129.683 -0.710 1.00 66.20 P
ATOM 3 OP1 G A 280 53.642 130.631 -1.228 1.00 66.30 O
ATOM 4 OP2 G A 280 55.797 130.203 0.095 1.00 67.89 O
ATOM 5 O5' G A 280 53.911 128.559 0.127 1.00 65.97 O
ATOM 6 C5' G A 280 52.745 127.898 -0.411 1.00 65.49 C
ATOM 7 C4' G A 280 52.379 126.708 0.444 1.00 65.04 C
ATOM 8 O4' G A 280 53.445 125.717 0.383 1.00 64.38 O
ATOM 9 C3' G A 280 52.250 126.998 1.931 1.00 65.43 C
ATOM 10 O3' G A 280 51.011 127.597 2.283 1.00 68.34 O
ATOM 11 C2' G A 280 52.468 125.622 2.538 1.00 63.54 C
ATOM 12 O2' G A 280 51.346 124.775 2.408 1.00 61.91 O
ATOM 13 C1' G A 280 53.602 125.107 1.655 1.00 62.46 C
ATOM 14 N9 G A 280 54.902 125.503 2.190 1.00 61.66 N
ATOM 15 C8 G A 280 55.562 126.698 1.995 1.00 61.04 C
ATOM 16 N7 G A 280 56.708 126.758 2.617 1.00 60.65 N
ATOM 17 C5 G A 280 56.815 125.530 3.256 1.00 60.80 C
ATOM 18 C6 G A 280 57.845 125.007 4.080 1.00 60.65 C
ATOM 19 O6 G A 280 58.914 125.537 4.407 1.00 61.12 O
ATOM 20 N1 G A 280 57.536 123.726 4.532 1.00 60.73 N
ATOM 21 C2 G A 280 56.388 123.035 4.226 1.00 60.55 C
ATOM 22 N2 G A 280 56.263 121.814 4.764 1.00 60.76 N
ATOM 23 N3 G A 280 55.430 123.505 3.450 1.00 60.19 N
ATOM 24 C4 G A 280 55.705 124.747 3.005 1.00 60.87 C
ATOM 25 P A A 281 50.882 128.375 3.684 1.00 70.84 P
ATOM 26 OP1 A A 281 49.624 129.171 3.643 1.00 70.99 O
ATOM 27 OP2 A A 281 52.178 129.058 3.950 1.00 70.91 O
ATOM 28 O5' A A 281 50.713 127.192 4.743 1.00 69.91 O
TER
ATOM 1 O3' A B 345 56.756 125.068 12.480 1.00 62.60 O
ATOM 2 P G B 346 58.126 125.444 13.243 1.00 63.79 P
ATOM 3 OP1 G B 346 58.521 124.342 14.160 1.00 63.81 O
ATOM 4 OP2 G B 346 57.942 126.816 13.781 1.00 63.95 O
ATOM 5 O5' G B 346 59.204 125.482 12.070 1.00 64.79 O
ATOM 6 C5' G B 346 58.966 126.263 10.879 1.00 65.72 C
ATOM 7 C4' G B 346 58.462 125.373 9.760 1.00 66.01 C
ATOM 8 O4' G B 346 57.714 126.177 8.809 1.00 65.58 O
ATOM 9 C3' G B 346 59.497 124.607 8.933 1.00 66.77 C
ATOM 10 O3' G B 346 58.854 123.397 8.489 1.00 68.49 O
ATOM 11 C2' G B 346 59.719 125.571 7.768 1.00 66.35 C
ATOM 12 O2' G B 346 60.289 124.988 6.615 1.00 67.25 O
ATOM 13 C1' G B 346 58.279 126.026 7.522 1.00 65.52 C
ATOM 14 N9 G B 346 58.053 127.263 6.785 1.00 64.96 N
ATOM 15 C8 G B 346 58.926 128.305 6.576 1.00 65.52 C
ATOM 16 N7 G B 346 58.393 129.291 5.907 1.00 65.75 N
ATOM 17 C5 G B 346 57.095 128.869 5.650 1.00 65.41 C
ATOM 18 C6 G B 346 56.035 129.519 4.962 1.00 65.57 C
ATOM 19 O6 G B 346 56.033 130.637 4.422 1.00 66.93 O
ATOM 20 N1 G B 346 54.886 128.733 4.937 1.00 65.24 N
ATOM 21 C2 G B 346 54.771 127.481 5.501 1.00 64.97 C
ATOM 22 N2 G B 346 53.573 126.880 5.383 1.00 64.42 N
ATOM 23 N3 G B 346 55.754 126.867 6.138 1.00 64.38 N
ATOM 24 C4 G B 346 56.876 127.615 6.177 1.00 64.72 C
ATOM 25 P U B 347 59.675 122.282 7.659 1.00 69.84 P
ATOM 26 OP1 U B 347 61.031 122.127 8.265 1.00 69.88 O
ATOM 27 OP2 U B 347 59.547 122.602 6.213 1.00 70.00 O
ATOM 28 O5' U B 347 58.847 120.940 7.896 1.00 67.99 O
TER
Atoms:
OP1: (53.642,130.631,-1.228)
OP2: (55.797,130.203,0.095)
C3': (52.250,126.998,1.931)
C1': (53.602,125.107,1.655)
C5': (52.745,127.898,-0.411)
O6: (58.914,125.537,4.407)
O4': (53.445,125.717,0.383)
C8: (55.562,126.698,1.995)
C2: (56.388,123.035,4.226)
C6: (57.845,125.007,4.080)
C5: (56.815,125.530,3.256)
C4: (55.705,124.747,3.005)
P: (54.665,129.683,-0.710)
C4': (52.379,126.708,0.444)
C2': (52.468,125.622,2.538)
O2': (51.346,124.775,2.408)
N1: (57.536,123.726,4.532)
N2: (56.263,121.814,4.764)
N3: (55.430,123.505,3.450)
N7: (56.708,126.758,2.617)
N9: (54.902,125.503,2.190)
O5': (53.911,128.559,0.127)
O3': (51.011,127.597,2.283)
OP2: (55.797,130.203,0.095)
C3': (52.250,126.998,1.931)
C1': (53.602,125.107,1.655)
C5': (52.745,127.898,-0.411)
O6: (58.914,125.537,4.407)
O4': (53.445,125.717,0.383)
C8: (55.562,126.698,1.995)
C2: (56.388,123.035,4.226)
C6: (57.845,125.007,4.080)
C5: (56.815,125.530,3.256)
C4: (55.705,124.747,3.005)
P: (54.665,129.683,-0.710)
C4': (52.379,126.708,0.444)
C2': (52.468,125.622,2.538)
O2': (51.346,124.775,2.408)
N1: (57.536,123.726,4.532)
N2: (56.263,121.814,4.764)
N3: (55.430,123.505,3.450)
N7: (56.708,126.758,2.617)
N9: (54.902,125.503,2.190)
O5': (53.911,128.559,0.127)
O3': (51.011,127.597,2.283)
OP1: (58.521,124.342,14.160)
OP2: (57.942,126.816,13.781)
C3': (59.497,124.607,8.933)
C1': (58.279,126.026,7.522)
C5': (58.966,126.263,10.879)
O6: (56.033,130.637,4.422)
O4': (57.714,126.177,8.809)
C8: (58.926,128.305,6.576)
C2: (54.771,127.481,5.501)
C6: (56.035,129.519,4.962)
C5: (57.095,128.869,5.650)
C4: (56.876,127.615,6.177)
P: (58.126,125.444,13.243)
C4': (58.462,125.373,9.760)
C2': (59.719,125.571,7.768)
O2': (60.289,124.988,6.615)
N1: (54.886,128.733,4.937)
N2: (53.573,126.880,5.383)
N3: (55.754,126.867,6.138)
N7: (58.393,129.291,5.907)
N9: (58.053,127.263,6.785)
O5': (59.204,125.482,12.070)
O3': (58.854,123.397,8.489)
OP2: (57.942,126.816,13.781)
C3': (59.497,124.607,8.933)
C1': (58.279,126.026,7.522)
C5': (58.966,126.263,10.879)
O6: (56.033,130.637,4.422)
O4': (57.714,126.177,8.809)
C8: (58.926,128.305,6.576)
C2: (54.771,127.481,5.501)
C6: (56.035,129.519,4.962)
C5: (57.095,128.869,5.650)
C4: (56.876,127.615,6.177)
P: (58.126,125.444,13.243)
C4': (58.462,125.373,9.760)
C2': (59.719,125.571,7.768)
O2': (60.289,124.988,6.615)
N1: (54.886,128.733,4.937)
N2: (53.573,126.880,5.383)
N3: (55.754,126.867,6.138)
N7: (58.393,129.291,5.907)
N9: (58.053,127.263,6.785)
O5': (59.204,125.482,12.070)
O3': (58.854,123.397,8.489)
Image (generated by PyMOL):