Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q9A:A8:A17
Extra
PDB:
ATOM 1 O3' A A 7 2.398 -38.527 -10.987 0.47 19.57 O
ATOM 2 N9 G A 8 3.729 -44.511 -10.932 1.00 19.87 N
ATOM 3 C8 G A 8 3.880 -45.192 -9.759 1.00 24.46 C
ATOM 4 N7 G A 8 5.042 -45.791 -9.643 1.00 25.43 N
ATOM 5 C5 G A 8 5.710 -45.487 -10.819 1.00 23.45 C
ATOM 6 C6 G A 8 6.995 -45.835 -11.294 1.00 22.95 C
ATOM 7 O6 G A 8 7.903 -46.540 -10.749 1.00 29.77 O
ATOM 8 N1 G A 8 7.258 -45.306 -12.544 1.00 23.04 N
ATOM 9 C2 G A 8 6.394 -44.531 -13.262 1.00 19.34 C
ATOM 10 N2 G A 8 6.822 -44.103 -14.463 1.00 20.31 N
ATOM 11 N3 G A 8 5.188 -44.195 -12.836 1.00 20.00 N
ATOM 12 C4 G A 8 4.914 -44.702 -11.621 1.00 19.59 C
ATOM 13 P G A 8 1.649 -38.684 -9.561 0.47 18.63 P
ATOM 14 OP1 G A 8 0.202 -38.476 -9.816 0.47 21.95 O
ATOM 15 OP2 G A 8 2.299 -37.937 -8.449 0.47 29.36 O
ATOM 16 O5' G A 8 1.865 -40.237 -9.261 0.47 19.08 O
ATOM 17 C5' G A 8 0.921 -41.247 -9.641 0.47 20.41 C
ATOM 18 C4' G A 8 1.339 -41.846 -10.954 0.47 18.68 C
ATOM 19 O4' G A 8 2.670 -42.424 -10.873 0.47 16.93 O
ATOM 20 C3' G A 8 0.423 -42.963 -11.450 0.47 18.66 C
ATOM 21 O3' G A 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 22 C2' G A 8 1.209 -44.216 -11.032 0.47 19.15 C
ATOM 23 O2' G A 8 0.832 -45.367 -11.753 0.47 19.56 O
ATOM 24 C1' G A 8 2.604 -43.737 -11.417 0.47 18.24 C
ATOM 25 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 26 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 27 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 28 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
TER
ATOM 1 O3' G B 16 9.472 -51.928 -14.314 1.00 16.51 O
ATOM 2 P G B 17 9.804 -50.511 -13.643 1.00 16.53 P
ATOM 3 OP1 G B 17 11.273 -50.407 -13.523 1.00 19.06 O
ATOM 4 OP2 G B 17 8.948 -50.333 -12.440 1.00 18.69 O
ATOM 5 O5' G B 17 9.263 -49.473 -14.723 1.00 15.41 O
ATOM 6 C5' G B 17 9.821 -49.351 -16.036 1.00 15.90 C
ATOM 7 C4' G B 17 8.975 -48.409 -16.871 1.00 14.86 C
ATOM 8 O4' G B 17 7.609 -48.881 -16.934 1.00 14.01 O
ATOM 9 C3' G B 17 8.808 -47.008 -16.266 1.00 14.19 C
ATOM 10 O3' G B 17 9.975 -46.231 -16.518 1.00 14.47 O
ATOM 11 C2' G B 17 7.572 -46.520 -17.022 1.00 13.26 C
ATOM 12 O2' G B 17 7.839 -46.312 -18.391 1.00 14.50 O
ATOM 13 C1' G B 17 6.706 -47.787 -16.931 1.00 13.51 C
ATOM 14 N9 G B 17 5.916 -47.814 -15.708 1.00 13.18 N
ATOM 15 C8 G B 17 6.185 -48.539 -14.572 1.00 14.49 C
ATOM 16 N7 G B 17 5.300 -48.363 -13.637 1.00 15.88 N
ATOM 17 C5 G B 17 4.389 -47.470 -14.178 1.00 15.36 C
ATOM 18 C6 G B 17 3.211 -46.902 -13.634 1.00 16.38 C
ATOM 19 O6 G B 17 2.724 -47.108 -12.487 1.00 19.24 O
ATOM 20 N1 G B 17 2.569 -46.037 -14.507 1.00 15.81 N
ATOM 21 C2 G B 17 3.021 -45.751 -15.776 1.00 13.86 C
ATOM 22 N2 G B 17 2.265 -44.890 -16.472 1.00 14.89 N
ATOM 23 N3 G B 17 4.130 -46.278 -16.305 1.00 13.54 N
ATOM 24 C4 G B 17 4.758 -47.120 -15.460 1.00 13.70 C
ATOM 25 P A B 18 10.283 -44.959 -15.597 1.00 14.83 P
ATOM 26 OP1 A B 18 11.688 -44.578 -15.831 1.00 16.52 O
ATOM 27 OP2 A B 18 9.798 -45.227 -14.226 1.00 16.29 O
ATOM 28 O5' A B 18 9.307 -43.844 -16.193 1.00 14.09 O
TER
ATOM 2 N9 G A 8 3.729 -44.511 -10.932 1.00 19.87 N
ATOM 3 C8 G A 8 3.880 -45.192 -9.759 1.00 24.46 C
ATOM 4 N7 G A 8 5.042 -45.791 -9.643 1.00 25.43 N
ATOM 5 C5 G A 8 5.710 -45.487 -10.819 1.00 23.45 C
ATOM 6 C6 G A 8 6.995 -45.835 -11.294 1.00 22.95 C
ATOM 7 O6 G A 8 7.903 -46.540 -10.749 1.00 29.77 O
ATOM 8 N1 G A 8 7.258 -45.306 -12.544 1.00 23.04 N
ATOM 9 C2 G A 8 6.394 -44.531 -13.262 1.00 19.34 C
ATOM 10 N2 G A 8 6.822 -44.103 -14.463 1.00 20.31 N
ATOM 11 N3 G A 8 5.188 -44.195 -12.836 1.00 20.00 N
ATOM 12 C4 G A 8 4.914 -44.702 -11.621 1.00 19.59 C
ATOM 13 P G A 8 1.649 -38.684 -9.561 0.47 18.63 P
ATOM 14 OP1 G A 8 0.202 -38.476 -9.816 0.47 21.95 O
ATOM 15 OP2 G A 8 2.299 -37.937 -8.449 0.47 29.36 O
ATOM 16 O5' G A 8 1.865 -40.237 -9.261 0.47 19.08 O
ATOM 17 C5' G A 8 0.921 -41.247 -9.641 0.47 20.41 C
ATOM 18 C4' G A 8 1.339 -41.846 -10.954 0.47 18.68 C
ATOM 19 O4' G A 8 2.670 -42.424 -10.873 0.47 16.93 O
ATOM 20 C3' G A 8 0.423 -42.963 -11.450 0.47 18.66 C
ATOM 21 O3' G A 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 22 C2' G A 8 1.209 -44.216 -11.032 0.47 19.15 C
ATOM 23 O2' G A 8 0.832 -45.367 -11.753 0.47 19.56 O
ATOM 24 C1' G A 8 2.604 -43.737 -11.417 0.47 18.24 C
ATOM 25 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 26 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 27 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 28 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
TER
ATOM 1 O3' G B 16 9.472 -51.928 -14.314 1.00 16.51 O
ATOM 2 P G B 17 9.804 -50.511 -13.643 1.00 16.53 P
ATOM 3 OP1 G B 17 11.273 -50.407 -13.523 1.00 19.06 O
ATOM 4 OP2 G B 17 8.948 -50.333 -12.440 1.00 18.69 O
ATOM 5 O5' G B 17 9.263 -49.473 -14.723 1.00 15.41 O
ATOM 6 C5' G B 17 9.821 -49.351 -16.036 1.00 15.90 C
ATOM 7 C4' G B 17 8.975 -48.409 -16.871 1.00 14.86 C
ATOM 8 O4' G B 17 7.609 -48.881 -16.934 1.00 14.01 O
ATOM 9 C3' G B 17 8.808 -47.008 -16.266 1.00 14.19 C
ATOM 10 O3' G B 17 9.975 -46.231 -16.518 1.00 14.47 O
ATOM 11 C2' G B 17 7.572 -46.520 -17.022 1.00 13.26 C
ATOM 12 O2' G B 17 7.839 -46.312 -18.391 1.00 14.50 O
ATOM 13 C1' G B 17 6.706 -47.787 -16.931 1.00 13.51 C
ATOM 14 N9 G B 17 5.916 -47.814 -15.708 1.00 13.18 N
ATOM 15 C8 G B 17 6.185 -48.539 -14.572 1.00 14.49 C
ATOM 16 N7 G B 17 5.300 -48.363 -13.637 1.00 15.88 N
ATOM 17 C5 G B 17 4.389 -47.470 -14.178 1.00 15.36 C
ATOM 18 C6 G B 17 3.211 -46.902 -13.634 1.00 16.38 C
ATOM 19 O6 G B 17 2.724 -47.108 -12.487 1.00 19.24 O
ATOM 20 N1 G B 17 2.569 -46.037 -14.507 1.00 15.81 N
ATOM 21 C2 G B 17 3.021 -45.751 -15.776 1.00 13.86 C
ATOM 22 N2 G B 17 2.265 -44.890 -16.472 1.00 14.89 N
ATOM 23 N3 G B 17 4.130 -46.278 -16.305 1.00 13.54 N
ATOM 24 C4 G B 17 4.758 -47.120 -15.460 1.00 13.70 C
ATOM 25 P A B 18 10.283 -44.959 -15.597 1.00 14.83 P
ATOM 26 OP1 A B 18 11.688 -44.578 -15.831 1.00 16.52 O
ATOM 27 OP2 A B 18 9.798 -45.227 -14.226 1.00 16.29 O
ATOM 28 O5' A B 18 9.307 -43.844 -16.193 1.00 14.09 O
TER
Atoms:
OP1: (0.202,-38.476,-9.816)
OP2: (2.299,-37.937,-8.449)
C3': (0.423,-42.963,-11.450)
C1': (2.604,-43.737,-11.417)
C5': (0.921,-41.247,-9.641)
O6: (7.903,-46.540,-10.749)
O4': (2.670,-42.424,-10.873)
C8: (3.880,-45.192,-9.759)
C2: (6.394,-44.531,-13.262)
C6: (6.995,-45.835,-11.294)
C5: (5.710,-45.487,-10.819)
C4: (4.914,-44.702,-11.621)
N9: (3.729,-44.511,-10.932)
C4': (1.339,-41.846,-10.954)
C2': (1.209,-44.216,-11.032)
O2': (0.832,-45.367,-11.753)
N1: (7.258,-45.306,-12.544)
N2: (6.822,-44.103,-14.463)
N3: (5.188,-44.195,-12.836)
N7: (5.042,-45.791,-9.643)
P: (1.649,-38.684,-9.561)
O5': (1.865,-40.237,-9.261)
O3': (0.428,-42.866,-12.877)
OP2: (2.299,-37.937,-8.449)
C3': (0.423,-42.963,-11.450)
C1': (2.604,-43.737,-11.417)
C5': (0.921,-41.247,-9.641)
O6: (7.903,-46.540,-10.749)
O4': (2.670,-42.424,-10.873)
C8: (3.880,-45.192,-9.759)
C2: (6.394,-44.531,-13.262)
C6: (6.995,-45.835,-11.294)
C5: (5.710,-45.487,-10.819)
C4: (4.914,-44.702,-11.621)
N9: (3.729,-44.511,-10.932)
C4': (1.339,-41.846,-10.954)
C2': (1.209,-44.216,-11.032)
O2': (0.832,-45.367,-11.753)
N1: (7.258,-45.306,-12.544)
N2: (6.822,-44.103,-14.463)
N3: (5.188,-44.195,-12.836)
N7: (5.042,-45.791,-9.643)
P: (1.649,-38.684,-9.561)
O5': (1.865,-40.237,-9.261)
O3': (0.428,-42.866,-12.877)
OP1: (11.273,-50.407,-13.523)
OP2: (8.948,-50.333,-12.440)
C3': (8.808,-47.008,-16.266)
C1': (6.706,-47.787,-16.931)
C5': (9.821,-49.351,-16.036)
O6: (2.724,-47.108,-12.487)
O4': (7.609,-48.881,-16.934)
C8: (6.185,-48.539,-14.572)
C2: (3.021,-45.751,-15.776)
C6: (3.211,-46.902,-13.634)
C5: (4.389,-47.470,-14.178)
C4: (4.758,-47.120,-15.460)
P: (9.804,-50.511,-13.643)
C4': (8.975,-48.409,-16.871)
C2': (7.572,-46.520,-17.022)
O2': (7.839,-46.312,-18.391)
N1: (2.569,-46.037,-14.507)
N2: (2.265,-44.890,-16.472)
N3: (4.130,-46.278,-16.305)
N7: (5.300,-48.363,-13.637)
N9: (5.916,-47.814,-15.708)
O5': (9.263,-49.473,-14.723)
O3': (9.975,-46.231,-16.518)
OP2: (8.948,-50.333,-12.440)
C3': (8.808,-47.008,-16.266)
C1': (6.706,-47.787,-16.931)
C5': (9.821,-49.351,-16.036)
O6: (2.724,-47.108,-12.487)
O4': (7.609,-48.881,-16.934)
C8: (6.185,-48.539,-14.572)
C2: (3.021,-45.751,-15.776)
C6: (3.211,-46.902,-13.634)
C5: (4.389,-47.470,-14.178)
C4: (4.758,-47.120,-15.460)
P: (9.804,-50.511,-13.643)
C4': (8.975,-48.409,-16.871)
C2': (7.572,-46.520,-17.022)
O2': (7.839,-46.312,-18.391)
N1: (2.569,-46.037,-14.507)
N2: (2.265,-44.890,-16.472)
N3: (4.130,-46.278,-16.305)
N7: (5.300,-48.363,-13.637)
N9: (5.916,-47.814,-15.708)
O5': (9.263,-49.473,-14.723)
O3': (9.975,-46.231,-16.518)
Image (generated by PyMOL):