Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 55.514 129.079 -2.002 1.00 91.66 O
ATOM 2 P G A 280 54.874 129.871 -0.765 1.00 90.36 P
ATOM 3 OP1 G A 280 53.833 130.784 -1.308 1.00 89.92 O
ATOM 4 OP2 G A 280 55.997 130.430 0.033 1.00 91.29 O
ATOM 5 O5' G A 280 54.152 128.730 0.082 1.00 90.38 O
ATOM 6 C5' G A 280 52.966 128.070 -0.418 1.00 89.67 C
ATOM 7 C4' G A 280 52.584 126.914 0.482 1.00 88.95 C
ATOM 8 O4' G A 280 53.630 125.903 0.447 1.00 88.48 O
ATOM 9 C3' G A 280 52.443 127.240 1.960 1.00 88.49 C
ATOM 10 O3' G A 280 51.189 127.831 2.278 1.00 89.14 O
ATOM 11 C2' G A 280 52.654 125.880 2.608 1.00 87.39 C
ATOM 12 O2' G A 280 51.526 125.033 2.525 1.00 87.03 O
ATOM 13 C1' G A 280 53.772 125.316 1.732 1.00 86.47 C
ATOM 14 N9 G A 280 55.088 125.677 2.249 1.00 84.93 N
ATOM 15 C8 G A 280 55.774 126.849 2.025 1.00 84.59 C
ATOM 16 N7 G A 280 56.926 126.891 2.635 1.00 84.47 N
ATOM 17 C5 G A 280 57.009 125.674 3.299 1.00 83.39 C
ATOM 18 C6 G A 280 58.030 125.150 4.126 1.00 82.54 C
ATOM 19 O6 G A 280 59.107 125.667 4.437 1.00 82.07 O
ATOM 20 N1 G A 280 57.701 123.885 4.603 1.00 81.68 N
ATOM 21 C2 G A 280 56.541 123.209 4.315 1.00 81.08 C
ATOM 22 N2 G A 280 56.402 122.005 4.875 1.00 80.76 N
ATOM 23 N3 G A 280 55.586 123.683 3.537 1.00 81.41 N
ATOM 24 C4 G A 280 55.882 124.913 3.069 1.00 83.43 C
ATOM 25 P A A 281 51.012 128.619 3.670 1.00 90.23 P
ATOM 26 OP1 A A 281 49.762 129.425 3.563 1.00 90.14 O
ATOM 27 OP2 A A 281 52.293 129.295 4.000 1.00 89.15 O
ATOM 28 O5' A A 281 50.800 127.447 4.733 1.00 90.35 O
TER
ATOM 1 O3' A B 345 56.741 125.260 12.505 1.00 83.39 O
ATOM 2 P G B 346 58.139 125.542 13.243 1.00 83.91 P
ATOM 3 OP1 G B 346 58.466 124.370 14.088 1.00 85.07 O
ATOM 4 OP2 G B 346 58.065 126.891 13.853 1.00 85.35 O
ATOM 5 O5' G B 346 59.200 125.580 12.055 1.00 86.63 O
ATOM 6 C5' G B 346 58.950 126.369 10.880 1.00 87.88 C
ATOM 7 C4' G B 346 58.504 125.482 9.741 1.00 88.18 C
ATOM 8 O4' G B 346 57.756 126.279 8.787 1.00 88.19 O
ATOM 9 C3' G B 346 59.591 124.768 8.935 1.00 88.08 C
ATOM 10 O3' G B 346 59.017 123.531 8.473 1.00 88.59 O
ATOM 11 C2' G B 346 59.806 125.752 7.786 1.00 87.77 C
ATOM 12 O2' G B 346 60.395 125.192 6.631 1.00 88.59 O
ATOM 13 C1' G B 346 58.364 126.180 7.518 1.00 87.71 C
ATOM 14 N9 G B 346 58.141 127.436 6.813 1.00 87.58 N
ATOM 15 C8 G B 346 59.015 128.481 6.626 1.00 87.79 C
ATOM 16 N7 G B 346 58.491 129.472 5.956 1.00 87.87 N
ATOM 17 C5 G B 346 57.194 129.053 5.685 1.00 88.23 C
ATOM 18 C6 G B 346 56.145 129.703 4.989 1.00 88.65 C
ATOM 19 O6 G B 346 56.150 130.822 4.459 1.00 90.11 O
ATOM 20 N1 G B 346 54.997 128.915 4.943 1.00 88.58 N
ATOM 21 C2 G B 346 54.872 127.665 5.498 1.00 87.28 C
ATOM 22 N2 G B 346 53.683 127.064 5.346 1.00 86.11 N
ATOM 23 N3 G B 346 55.839 127.051 6.152 1.00 86.80 N
ATOM 24 C4 G B 346 56.965 127.798 6.205 1.00 87.81 C
ATOM 25 P U B 347 59.923 122.434 7.710 1.00 88.10 P
ATOM 26 OP1 U B 347 61.249 122.317 8.376 1.00 89.05 O
ATOM 27 OP2 U B 347 59.858 122.733 6.251 1.00 89.05 O
ATOM 28 O5' U B 347 59.117 121.074 7.919 1.00 87.38 O
TER
ATOM 2 P G A 280 54.874 129.871 -0.765 1.00 90.36 P
ATOM 3 OP1 G A 280 53.833 130.784 -1.308 1.00 89.92 O
ATOM 4 OP2 G A 280 55.997 130.430 0.033 1.00 91.29 O
ATOM 5 O5' G A 280 54.152 128.730 0.082 1.00 90.38 O
ATOM 6 C5' G A 280 52.966 128.070 -0.418 1.00 89.67 C
ATOM 7 C4' G A 280 52.584 126.914 0.482 1.00 88.95 C
ATOM 8 O4' G A 280 53.630 125.903 0.447 1.00 88.48 O
ATOM 9 C3' G A 280 52.443 127.240 1.960 1.00 88.49 C
ATOM 10 O3' G A 280 51.189 127.831 2.278 1.00 89.14 O
ATOM 11 C2' G A 280 52.654 125.880 2.608 1.00 87.39 C
ATOM 12 O2' G A 280 51.526 125.033 2.525 1.00 87.03 O
ATOM 13 C1' G A 280 53.772 125.316 1.732 1.00 86.47 C
ATOM 14 N9 G A 280 55.088 125.677 2.249 1.00 84.93 N
ATOM 15 C8 G A 280 55.774 126.849 2.025 1.00 84.59 C
ATOM 16 N7 G A 280 56.926 126.891 2.635 1.00 84.47 N
ATOM 17 C5 G A 280 57.009 125.674 3.299 1.00 83.39 C
ATOM 18 C6 G A 280 58.030 125.150 4.126 1.00 82.54 C
ATOM 19 O6 G A 280 59.107 125.667 4.437 1.00 82.07 O
ATOM 20 N1 G A 280 57.701 123.885 4.603 1.00 81.68 N
ATOM 21 C2 G A 280 56.541 123.209 4.315 1.00 81.08 C
ATOM 22 N2 G A 280 56.402 122.005 4.875 1.00 80.76 N
ATOM 23 N3 G A 280 55.586 123.683 3.537 1.00 81.41 N
ATOM 24 C4 G A 280 55.882 124.913 3.069 1.00 83.43 C
ATOM 25 P A A 281 51.012 128.619 3.670 1.00 90.23 P
ATOM 26 OP1 A A 281 49.762 129.425 3.563 1.00 90.14 O
ATOM 27 OP2 A A 281 52.293 129.295 4.000 1.00 89.15 O
ATOM 28 O5' A A 281 50.800 127.447 4.733 1.00 90.35 O
TER
ATOM 1 O3' A B 345 56.741 125.260 12.505 1.00 83.39 O
ATOM 2 P G B 346 58.139 125.542 13.243 1.00 83.91 P
ATOM 3 OP1 G B 346 58.466 124.370 14.088 1.00 85.07 O
ATOM 4 OP2 G B 346 58.065 126.891 13.853 1.00 85.35 O
ATOM 5 O5' G B 346 59.200 125.580 12.055 1.00 86.63 O
ATOM 6 C5' G B 346 58.950 126.369 10.880 1.00 87.88 C
ATOM 7 C4' G B 346 58.504 125.482 9.741 1.00 88.18 C
ATOM 8 O4' G B 346 57.756 126.279 8.787 1.00 88.19 O
ATOM 9 C3' G B 346 59.591 124.768 8.935 1.00 88.08 C
ATOM 10 O3' G B 346 59.017 123.531 8.473 1.00 88.59 O
ATOM 11 C2' G B 346 59.806 125.752 7.786 1.00 87.77 C
ATOM 12 O2' G B 346 60.395 125.192 6.631 1.00 88.59 O
ATOM 13 C1' G B 346 58.364 126.180 7.518 1.00 87.71 C
ATOM 14 N9 G B 346 58.141 127.436 6.813 1.00 87.58 N
ATOM 15 C8 G B 346 59.015 128.481 6.626 1.00 87.79 C
ATOM 16 N7 G B 346 58.491 129.472 5.956 1.00 87.87 N
ATOM 17 C5 G B 346 57.194 129.053 5.685 1.00 88.23 C
ATOM 18 C6 G B 346 56.145 129.703 4.989 1.00 88.65 C
ATOM 19 O6 G B 346 56.150 130.822 4.459 1.00 90.11 O
ATOM 20 N1 G B 346 54.997 128.915 4.943 1.00 88.58 N
ATOM 21 C2 G B 346 54.872 127.665 5.498 1.00 87.28 C
ATOM 22 N2 G B 346 53.683 127.064 5.346 1.00 86.11 N
ATOM 23 N3 G B 346 55.839 127.051 6.152 1.00 86.80 N
ATOM 24 C4 G B 346 56.965 127.798 6.205 1.00 87.81 C
ATOM 25 P U B 347 59.923 122.434 7.710 1.00 88.10 P
ATOM 26 OP1 U B 347 61.249 122.317 8.376 1.00 89.05 O
ATOM 27 OP2 U B 347 59.858 122.733 6.251 1.00 89.05 O
ATOM 28 O5' U B 347 59.117 121.074 7.919 1.00 87.38 O
TER
Atoms:
OP1: (53.833,130.784,-1.308)
OP2: (55.997,130.430,0.033)
C3': (52.443,127.240,1.960)
C1': (53.772,125.316,1.732)
C5': (52.966,128.070,-0.418)
O6: (59.107,125.667,4.437)
O4': (53.630,125.903,0.447)
C8: (55.774,126.849,2.025)
C2: (56.541,123.209,4.315)
C6: (58.030,125.150,4.126)
C5: (57.009,125.674,3.299)
C4: (55.882,124.913,3.069)
P: (54.874,129.871,-0.765)
C4': (52.584,126.914,0.482)
C2': (52.654,125.880,2.608)
O2': (51.526,125.033,2.525)
N1: (57.701,123.885,4.603)
N2: (56.402,122.005,4.875)
N3: (55.586,123.683,3.537)
N7: (56.926,126.891,2.635)
N9: (55.088,125.677,2.249)
O5': (54.152,128.730,0.082)
O3': (51.189,127.831,2.278)
OP2: (55.997,130.430,0.033)
C3': (52.443,127.240,1.960)
C1': (53.772,125.316,1.732)
C5': (52.966,128.070,-0.418)
O6: (59.107,125.667,4.437)
O4': (53.630,125.903,0.447)
C8: (55.774,126.849,2.025)
C2: (56.541,123.209,4.315)
C6: (58.030,125.150,4.126)
C5: (57.009,125.674,3.299)
C4: (55.882,124.913,3.069)
P: (54.874,129.871,-0.765)
C4': (52.584,126.914,0.482)
C2': (52.654,125.880,2.608)
O2': (51.526,125.033,2.525)
N1: (57.701,123.885,4.603)
N2: (56.402,122.005,4.875)
N3: (55.586,123.683,3.537)
N7: (56.926,126.891,2.635)
N9: (55.088,125.677,2.249)
O5': (54.152,128.730,0.082)
O3': (51.189,127.831,2.278)
OP1: (58.466,124.370,14.088)
OP2: (58.065,126.891,13.853)
C3': (59.591,124.768,8.935)
C1': (58.364,126.180,7.518)
C5': (58.950,126.369,10.880)
O6: (56.150,130.822,4.459)
O4': (57.756,126.279,8.787)
C8: (59.015,128.481,6.626)
C2: (54.872,127.665,5.498)
C6: (56.145,129.703,4.989)
C5: (57.194,129.053,5.685)
C4: (56.965,127.798,6.205)
P: (58.139,125.542,13.243)
C4': (58.504,125.482,9.741)
C2': (59.806,125.752,7.786)
O2': (60.395,125.192,6.631)
N1: (54.997,128.915,4.943)
N2: (53.683,127.064,5.346)
N3: (55.839,127.051,6.152)
N7: (58.491,129.472,5.956)
N9: (58.141,127.436,6.813)
O5': (59.200,125.580,12.055)
O3': (59.017,123.531,8.473)
OP2: (58.065,126.891,13.853)
C3': (59.591,124.768,8.935)
C1': (58.364,126.180,7.518)
C5': (58.950,126.369,10.880)
O6: (56.150,130.822,4.459)
O4': (57.756,126.279,8.787)
C8: (59.015,128.481,6.626)
C2: (54.872,127.665,5.498)
C6: (56.145,129.703,4.989)
C5: (57.194,129.053,5.685)
C4: (56.965,127.798,6.205)
P: (58.139,125.542,13.243)
C4': (58.504,125.482,9.741)
C2': (59.806,125.752,7.786)
O2': (60.395,125.192,6.631)
N1: (54.997,128.915,4.943)
N2: (53.683,127.064,5.346)
N3: (55.839,127.051,6.152)
N7: (58.491,129.472,5.956)
N9: (58.141,127.436,6.813)
O5': (59.200,125.580,12.055)
O3': (59.017,123.531,8.473)
Image (generated by PyMOL):