Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 55.127 129.129 -1.941 1.00 82.27 O
ATOM 2 P G A 280 54.438 129.878 -0.703 1.00 81.28 P
ATOM 3 OP1 G A 280 53.385 130.770 -1.259 1.00 81.17 O
ATOM 4 OP2 G A 280 55.516 130.455 0.143 1.00 81.78 O
ATOM 5 O5' G A 280 53.721 128.704 0.103 1.00 81.83 O
ATOM 6 C5' G A 280 52.552 128.043 -0.427 1.00 80.64 C
ATOM 7 C4' G A 280 52.177 126.864 0.442 1.00 80.29 C
ATOM 8 O4' G A 280 53.236 125.868 0.397 1.00 79.83 O
ATOM 9 C3' G A 280 52.022 127.165 1.925 1.00 80.46 C
ATOM 10 O3' G A 280 50.756 127.739 2.237 1.00 81.22 O
ATOM 11 C2' G A 280 52.249 125.795 2.550 1.00 79.45 C
ATOM 12 O2' G A 280 51.139 124.932 2.424 1.00 79.77 O
ATOM 13 C1' G A 280 53.383 125.266 1.675 1.00 78.61 C
ATOM 14 N9 G A 280 54.690 125.643 2.201 1.00 77.98 N
ATOM 15 C8 G A 280 55.358 126.830 1.994 1.00 77.29 C
ATOM 16 N7 G A 280 56.514 126.880 2.593 1.00 76.82 N
ATOM 17 C5 G A 280 56.620 125.653 3.237 1.00 76.87 C
ATOM 18 C6 G A 280 57.658 125.130 4.045 1.00 76.59 C
ATOM 19 O6 G A 280 58.730 125.662 4.358 1.00 76.40 O
ATOM 20 N1 G A 280 57.353 123.850 4.503 1.00 76.25 N
ATOM 21 C2 G A 280 56.200 123.160 4.216 1.00 75.40 C
ATOM 22 N2 G A 280 56.093 121.938 4.752 1.00 74.34 N
ATOM 23 N3 G A 280 55.226 123.635 3.460 1.00 75.62 N
ATOM 24 C4 G A 280 55.501 124.879 3.007 1.00 77.08 C
ATOM 25 P A A 281 50.571 128.560 3.609 1.00 80.24 P
ATOM 26 OP1 A A 281 49.297 129.320 3.491 1.00 80.31 O
ATOM 27 OP2 A A 281 51.833 129.289 3.897 1.00 80.43 O
ATOM 28 O5' A A 281 50.416 127.408 4.703 1.00 80.48 O
TER
ATOM 1 O3' A B 345 56.525 125.128 12.340 1.00 75.55 O
ATOM 2 P G B 346 57.858 125.501 13.159 1.00 75.70 P
ATOM 3 OP1 G B 346 58.208 124.367 14.048 1.00 76.39 O
ATOM 4 OP2 G B 346 57.649 126.854 13.735 1.00 76.79 O
ATOM 5 O5' G B 346 58.987 125.587 12.039 1.00 77.84 O
ATOM 6 C5' G B 346 58.770 126.355 10.843 1.00 79.56 C
ATOM 7 C4' G B 346 58.251 125.464 9.737 1.00 80.04 C
ATOM 8 O4' G B 346 57.466 126.263 8.815 1.00 80.51 O
ATOM 9 C3' G B 346 59.281 124.724 8.884 1.00 80.29 C
ATOM 10 O3' G B 346 58.669 123.493 8.464 1.00 81.18 O
ATOM 11 C2' G B 346 59.453 125.695 7.717 1.00 80.13 C
ATOM 12 O2' G B 346 59.984 125.121 6.542 1.00 80.34 O
ATOM 13 C1' G B 346 58.006 126.143 7.517 1.00 80.58 C
ATOM 14 N9 G B 346 57.765 127.398 6.813 1.00 80.45 N
ATOM 15 C8 G B 346 58.623 128.460 6.640 1.00 80.83 C
ATOM 16 N7 G B 346 58.086 129.449 5.977 1.00 80.50 N
ATOM 17 C5 G B 346 56.800 129.010 5.690 1.00 80.50 C
ATOM 18 C6 G B 346 55.746 129.649 4.992 1.00 81.20 C
ATOM 19 O6 G B 346 55.737 130.771 4.469 1.00 82.25 O
ATOM 20 N1 G B 346 54.610 128.844 4.933 1.00 81.52 N
ATOM 21 C2 G B 346 54.501 127.586 5.477 1.00 80.34 C
ATOM 22 N2 G B 346 53.321 126.969 5.314 1.00 79.77 N
ATOM 23 N3 G B 346 55.476 126.980 6.130 1.00 79.28 N
ATOM 24 C4 G B 346 56.589 127.745 6.197 1.00 80.22 C
ATOM 25 P U B 347 59.516 122.379 7.659 1.00 81.38 P
ATOM 26 OP1 U B 347 60.850 122.189 8.291 1.00 81.78 O
ATOM 27 OP2 U B 347 59.432 122.711 6.214 1.00 82.39 O
ATOM 28 O5' U B 347 58.663 121.047 7.859 1.00 80.60 O
TER
ATOM 2 P G A 280 54.438 129.878 -0.703 1.00 81.28 P
ATOM 3 OP1 G A 280 53.385 130.770 -1.259 1.00 81.17 O
ATOM 4 OP2 G A 280 55.516 130.455 0.143 1.00 81.78 O
ATOM 5 O5' G A 280 53.721 128.704 0.103 1.00 81.83 O
ATOM 6 C5' G A 280 52.552 128.043 -0.427 1.00 80.64 C
ATOM 7 C4' G A 280 52.177 126.864 0.442 1.00 80.29 C
ATOM 8 O4' G A 280 53.236 125.868 0.397 1.00 79.83 O
ATOM 9 C3' G A 280 52.022 127.165 1.925 1.00 80.46 C
ATOM 10 O3' G A 280 50.756 127.739 2.237 1.00 81.22 O
ATOM 11 C2' G A 280 52.249 125.795 2.550 1.00 79.45 C
ATOM 12 O2' G A 280 51.139 124.932 2.424 1.00 79.77 O
ATOM 13 C1' G A 280 53.383 125.266 1.675 1.00 78.61 C
ATOM 14 N9 G A 280 54.690 125.643 2.201 1.00 77.98 N
ATOM 15 C8 G A 280 55.358 126.830 1.994 1.00 77.29 C
ATOM 16 N7 G A 280 56.514 126.880 2.593 1.00 76.82 N
ATOM 17 C5 G A 280 56.620 125.653 3.237 1.00 76.87 C
ATOM 18 C6 G A 280 57.658 125.130 4.045 1.00 76.59 C
ATOM 19 O6 G A 280 58.730 125.662 4.358 1.00 76.40 O
ATOM 20 N1 G A 280 57.353 123.850 4.503 1.00 76.25 N
ATOM 21 C2 G A 280 56.200 123.160 4.216 1.00 75.40 C
ATOM 22 N2 G A 280 56.093 121.938 4.752 1.00 74.34 N
ATOM 23 N3 G A 280 55.226 123.635 3.460 1.00 75.62 N
ATOM 24 C4 G A 280 55.501 124.879 3.007 1.00 77.08 C
ATOM 25 P A A 281 50.571 128.560 3.609 1.00 80.24 P
ATOM 26 OP1 A A 281 49.297 129.320 3.491 1.00 80.31 O
ATOM 27 OP2 A A 281 51.833 129.289 3.897 1.00 80.43 O
ATOM 28 O5' A A 281 50.416 127.408 4.703 1.00 80.48 O
TER
ATOM 1 O3' A B 345 56.525 125.128 12.340 1.00 75.55 O
ATOM 2 P G B 346 57.858 125.501 13.159 1.00 75.70 P
ATOM 3 OP1 G B 346 58.208 124.367 14.048 1.00 76.39 O
ATOM 4 OP2 G B 346 57.649 126.854 13.735 1.00 76.79 O
ATOM 5 O5' G B 346 58.987 125.587 12.039 1.00 77.84 O
ATOM 6 C5' G B 346 58.770 126.355 10.843 1.00 79.56 C
ATOM 7 C4' G B 346 58.251 125.464 9.737 1.00 80.04 C
ATOM 8 O4' G B 346 57.466 126.263 8.815 1.00 80.51 O
ATOM 9 C3' G B 346 59.281 124.724 8.884 1.00 80.29 C
ATOM 10 O3' G B 346 58.669 123.493 8.464 1.00 81.18 O
ATOM 11 C2' G B 346 59.453 125.695 7.717 1.00 80.13 C
ATOM 12 O2' G B 346 59.984 125.121 6.542 1.00 80.34 O
ATOM 13 C1' G B 346 58.006 126.143 7.517 1.00 80.58 C
ATOM 14 N9 G B 346 57.765 127.398 6.813 1.00 80.45 N
ATOM 15 C8 G B 346 58.623 128.460 6.640 1.00 80.83 C
ATOM 16 N7 G B 346 58.086 129.449 5.977 1.00 80.50 N
ATOM 17 C5 G B 346 56.800 129.010 5.690 1.00 80.50 C
ATOM 18 C6 G B 346 55.746 129.649 4.992 1.00 81.20 C
ATOM 19 O6 G B 346 55.737 130.771 4.469 1.00 82.25 O
ATOM 20 N1 G B 346 54.610 128.844 4.933 1.00 81.52 N
ATOM 21 C2 G B 346 54.501 127.586 5.477 1.00 80.34 C
ATOM 22 N2 G B 346 53.321 126.969 5.314 1.00 79.77 N
ATOM 23 N3 G B 346 55.476 126.980 6.130 1.00 79.28 N
ATOM 24 C4 G B 346 56.589 127.745 6.197 1.00 80.22 C
ATOM 25 P U B 347 59.516 122.379 7.659 1.00 81.38 P
ATOM 26 OP1 U B 347 60.850 122.189 8.291 1.00 81.78 O
ATOM 27 OP2 U B 347 59.432 122.711 6.214 1.00 82.39 O
ATOM 28 O5' U B 347 58.663 121.047 7.859 1.00 80.60 O
TER
Atoms:
OP1: (53.385,130.770,-1.259)
OP2: (55.516,130.455,0.143)
C3': (52.022,127.165,1.925)
C1': (53.383,125.266,1.675)
C5': (52.552,128.043,-0.427)
O6: (58.730,125.662,4.358)
O4': (53.236,125.868,0.397)
C8: (55.358,126.830,1.994)
C2: (56.200,123.160,4.216)
C6: (57.658,125.130,4.045)
C5: (56.620,125.653,3.237)
C4: (55.501,124.879,3.007)
P: (54.438,129.878,-0.703)
C4': (52.177,126.864,0.442)
C2': (52.249,125.795,2.550)
O2': (51.139,124.932,2.424)
N1: (57.353,123.850,4.503)
N2: (56.093,121.938,4.752)
N3: (55.226,123.635,3.460)
N7: (56.514,126.880,2.593)
N9: (54.690,125.643,2.201)
O5': (53.721,128.704,0.103)
O3': (50.756,127.739,2.237)
OP2: (55.516,130.455,0.143)
C3': (52.022,127.165,1.925)
C1': (53.383,125.266,1.675)
C5': (52.552,128.043,-0.427)
O6: (58.730,125.662,4.358)
O4': (53.236,125.868,0.397)
C8: (55.358,126.830,1.994)
C2: (56.200,123.160,4.216)
C6: (57.658,125.130,4.045)
C5: (56.620,125.653,3.237)
C4: (55.501,124.879,3.007)
P: (54.438,129.878,-0.703)
C4': (52.177,126.864,0.442)
C2': (52.249,125.795,2.550)
O2': (51.139,124.932,2.424)
N1: (57.353,123.850,4.503)
N2: (56.093,121.938,4.752)
N3: (55.226,123.635,3.460)
N7: (56.514,126.880,2.593)
N9: (54.690,125.643,2.201)
O5': (53.721,128.704,0.103)
O3': (50.756,127.739,2.237)
OP1: (58.208,124.367,14.048)
OP2: (57.649,126.854,13.735)
C3': (59.281,124.724,8.884)
C1': (58.006,126.143,7.517)
C5': (58.770,126.355,10.843)
O6: (55.737,130.771,4.469)
O4': (57.466,126.263,8.815)
C8: (58.623,128.460,6.640)
C2: (54.501,127.586,5.477)
C6: (55.746,129.649,4.992)
C5: (56.800,129.010,5.690)
C4: (56.589,127.745,6.197)
P: (57.858,125.501,13.159)
C4': (58.251,125.464,9.737)
C2': (59.453,125.695,7.717)
O2': (59.984,125.121,6.542)
N1: (54.610,128.844,4.933)
N2: (53.321,126.969,5.314)
N3: (55.476,126.980,6.130)
N7: (58.086,129.449,5.977)
N9: (57.765,127.398,6.813)
O5': (58.987,125.587,12.039)
O3': (58.669,123.493,8.464)
OP2: (57.649,126.854,13.735)
C3': (59.281,124.724,8.884)
C1': (58.006,126.143,7.517)
C5': (58.770,126.355,10.843)
O6: (55.737,130.771,4.469)
O4': (57.466,126.263,8.815)
C8: (58.623,128.460,6.640)
C2: (54.501,127.586,5.477)
C6: (55.746,129.649,4.992)
C5: (56.800,129.010,5.690)
C4: (56.589,127.745,6.197)
P: (57.858,125.501,13.159)
C4': (58.251,125.464,9.737)
C2': (59.453,125.695,7.717)
O2': (59.984,125.121,6.542)
N1: (54.610,128.844,4.933)
N2: (53.321,126.969,5.314)
N3: (55.476,126.980,6.130)
N7: (58.086,129.449,5.977)
N9: (57.765,127.398,6.813)
O5': (58.987,125.587,12.039)
O3': (58.669,123.493,8.464)
Image (generated by PyMOL):