Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 54.405 127.865 -1.879 1.00 71.90 O
ATOM 2 P G A 280 53.883 128.747 -0.640 1.00 72.02 P
ATOM 3 OP1 G A 280 53.017 129.818 -1.205 1.00 71.67 O
ATOM 4 OP2 G A 280 55.061 129.114 0.194 1.00 70.85 O
ATOM 5 O5' G A 280 52.959 127.749 0.189 1.00 71.98 O
ATOM 6 C5' G A 280 51.833 127.084 -0.429 1.00 72.48 C
ATOM 7 C4' G A 280 51.509 125.808 0.316 1.00 73.07 C
ATOM 8 O4' G A 280 52.616 124.875 0.183 1.00 73.18 O
ATOM 9 C3' G A 280 51.341 125.962 1.820 1.00 73.76 C
ATOM 10 O3' G A 280 50.047 126.428 2.180 1.00 75.42 O
ATOM 11 C2' G A 280 51.648 124.560 2.326 1.00 72.48 C
ATOM 12 O2' G A 280 50.583 123.651 2.141 1.00 71.78 O
ATOM 13 C1' G A 280 52.803 124.171 1.403 1.00 71.89 C
ATOM 14 N9 G A 280 54.099 124.554 1.955 1.00 70.70 N
ATOM 15 C8 G A 280 54.780 125.735 1.753 1.00 70.52 C
ATOM 16 N7 G A 280 55.929 125.779 2.373 1.00 69.67 N
ATOM 17 C5 G A 280 56.011 124.555 3.027 1.00 70.43 C
ATOM 18 C6 G A 280 57.036 124.017 3.854 1.00 70.27 C
ATOM 19 O6 G A 280 58.117 124.529 4.173 1.00 70.85 O
ATOM 20 N1 G A 280 56.705 122.745 4.316 1.00 69.25 N
ATOM 21 C2 G A 280 55.545 122.072 4.015 1.00 68.36 C
ATOM 22 N2 G A 280 55.410 120.858 4.550 1.00 67.34 N
ATOM 23 N3 G A 280 54.588 122.556 3.243 1.00 69.08 N
ATOM 24 C4 G A 280 54.884 123.793 2.785 1.00 70.46 C
ATOM 25 P A A 281 49.858 127.275 3.535 1.00 77.33 P
ATOM 26 OP1 A A 281 48.533 127.959 3.428 1.00 75.87 O
ATOM 27 OP2 A A 281 51.092 128.086 3.769 1.00 75.63 O
ATOM 28 O5' A A 281 49.780 126.150 4.664 1.00 75.04 O
TER
ATOM 1 O3' A B 345 55.829 124.069 12.383 1.00 77.35 O
ATOM 2 P G B 346 57.289 124.355 13.003 1.00 78.73 P
ATOM 3 OP1 G B 346 57.678 123.203 13.858 1.00 78.43 O
ATOM 4 OP2 G B 346 57.286 125.730 13.575 1.00 77.93 O
ATOM 5 O5' G B 346 58.248 124.339 11.730 1.00 79.52 O
ATOM 6 C5' G B 346 57.914 125.106 10.560 1.00 79.34 C
ATOM 7 C4' G B 346 57.468 124.189 9.444 1.00 79.18 C
ATOM 8 O4' G B 346 56.663 124.941 8.498 1.00 78.61 O
ATOM 9 C3' G B 346 58.568 123.525 8.623 1.00 78.88 C
ATOM 10 O3' G B 346 58.043 122.279 8.146 1.00 79.57 O
ATOM 11 C2' G B 346 58.743 124.529 7.485 1.00 78.38 C
ATOM 12 O2' G B 346 59.347 123.989 6.326 1.00 78.23 O
ATOM 13 C1' G B 346 57.287 124.927 7.231 1.00 77.45 C
ATOM 14 N9 G B 346 57.049 126.225 6.609 1.00 75.89 N
ATOM 15 C8 G B 346 57.896 127.308 6.540 1.00 75.33 C
ATOM 16 N7 G B 346 57.367 128.333 5.928 1.00 74.74 N
ATOM 17 C5 G B 346 56.098 127.900 5.568 1.00 75.59 C
ATOM 18 C6 G B 346 55.056 128.574 4.882 1.00 76.69 C
ATOM 19 O6 G B 346 55.044 129.731 4.441 1.00 78.04 O
ATOM 20 N1 G B 346 53.934 127.761 4.729 1.00 77.11 N
ATOM 21 C2 G B 346 53.826 126.467 5.181 1.00 76.59 C
ATOM 22 N2 G B 346 52.660 125.847 4.935 1.00 77.31 N
ATOM 23 N3 G B 346 54.789 125.828 5.825 1.00 75.27 N
ATOM 24 C4 G B 346 55.889 126.600 5.981 1.00 75.73 C
ATOM 25 P U B 347 59.022 121.165 7.515 1.00 80.35 P
ATOM 26 OP1 U B 347 60.317 121.155 8.256 1.00 79.87 O
ATOM 27 OP2 U B 347 59.022 121.352 6.039 1.00 79.70 O
ATOM 28 O5' U B 347 58.252 119.798 7.794 1.00 78.89 O
TER
ATOM 2 P G A 280 53.883 128.747 -0.640 1.00 72.02 P
ATOM 3 OP1 G A 280 53.017 129.818 -1.205 1.00 71.67 O
ATOM 4 OP2 G A 280 55.061 129.114 0.194 1.00 70.85 O
ATOM 5 O5' G A 280 52.959 127.749 0.189 1.00 71.98 O
ATOM 6 C5' G A 280 51.833 127.084 -0.429 1.00 72.48 C
ATOM 7 C4' G A 280 51.509 125.808 0.316 1.00 73.07 C
ATOM 8 O4' G A 280 52.616 124.875 0.183 1.00 73.18 O
ATOM 9 C3' G A 280 51.341 125.962 1.820 1.00 73.76 C
ATOM 10 O3' G A 280 50.047 126.428 2.180 1.00 75.42 O
ATOM 11 C2' G A 280 51.648 124.560 2.326 1.00 72.48 C
ATOM 12 O2' G A 280 50.583 123.651 2.141 1.00 71.78 O
ATOM 13 C1' G A 280 52.803 124.171 1.403 1.00 71.89 C
ATOM 14 N9 G A 280 54.099 124.554 1.955 1.00 70.70 N
ATOM 15 C8 G A 280 54.780 125.735 1.753 1.00 70.52 C
ATOM 16 N7 G A 280 55.929 125.779 2.373 1.00 69.67 N
ATOM 17 C5 G A 280 56.011 124.555 3.027 1.00 70.43 C
ATOM 18 C6 G A 280 57.036 124.017 3.854 1.00 70.27 C
ATOM 19 O6 G A 280 58.117 124.529 4.173 1.00 70.85 O
ATOM 20 N1 G A 280 56.705 122.745 4.316 1.00 69.25 N
ATOM 21 C2 G A 280 55.545 122.072 4.015 1.00 68.36 C
ATOM 22 N2 G A 280 55.410 120.858 4.550 1.00 67.34 N
ATOM 23 N3 G A 280 54.588 122.556 3.243 1.00 69.08 N
ATOM 24 C4 G A 280 54.884 123.793 2.785 1.00 70.46 C
ATOM 25 P A A 281 49.858 127.275 3.535 1.00 77.33 P
ATOM 26 OP1 A A 281 48.533 127.959 3.428 1.00 75.87 O
ATOM 27 OP2 A A 281 51.092 128.086 3.769 1.00 75.63 O
ATOM 28 O5' A A 281 49.780 126.150 4.664 1.00 75.04 O
TER
ATOM 1 O3' A B 345 55.829 124.069 12.383 1.00 77.35 O
ATOM 2 P G B 346 57.289 124.355 13.003 1.00 78.73 P
ATOM 3 OP1 G B 346 57.678 123.203 13.858 1.00 78.43 O
ATOM 4 OP2 G B 346 57.286 125.730 13.575 1.00 77.93 O
ATOM 5 O5' G B 346 58.248 124.339 11.730 1.00 79.52 O
ATOM 6 C5' G B 346 57.914 125.106 10.560 1.00 79.34 C
ATOM 7 C4' G B 346 57.468 124.189 9.444 1.00 79.18 C
ATOM 8 O4' G B 346 56.663 124.941 8.498 1.00 78.61 O
ATOM 9 C3' G B 346 58.568 123.525 8.623 1.00 78.88 C
ATOM 10 O3' G B 346 58.043 122.279 8.146 1.00 79.57 O
ATOM 11 C2' G B 346 58.743 124.529 7.485 1.00 78.38 C
ATOM 12 O2' G B 346 59.347 123.989 6.326 1.00 78.23 O
ATOM 13 C1' G B 346 57.287 124.927 7.231 1.00 77.45 C
ATOM 14 N9 G B 346 57.049 126.225 6.609 1.00 75.89 N
ATOM 15 C8 G B 346 57.896 127.308 6.540 1.00 75.33 C
ATOM 16 N7 G B 346 57.367 128.333 5.928 1.00 74.74 N
ATOM 17 C5 G B 346 56.098 127.900 5.568 1.00 75.59 C
ATOM 18 C6 G B 346 55.056 128.574 4.882 1.00 76.69 C
ATOM 19 O6 G B 346 55.044 129.731 4.441 1.00 78.04 O
ATOM 20 N1 G B 346 53.934 127.761 4.729 1.00 77.11 N
ATOM 21 C2 G B 346 53.826 126.467 5.181 1.00 76.59 C
ATOM 22 N2 G B 346 52.660 125.847 4.935 1.00 77.31 N
ATOM 23 N3 G B 346 54.789 125.828 5.825 1.00 75.27 N
ATOM 24 C4 G B 346 55.889 126.600 5.981 1.00 75.73 C
ATOM 25 P U B 347 59.022 121.165 7.515 1.00 80.35 P
ATOM 26 OP1 U B 347 60.317 121.155 8.256 1.00 79.87 O
ATOM 27 OP2 U B 347 59.022 121.352 6.039 1.00 79.70 O
ATOM 28 O5' U B 347 58.252 119.798 7.794 1.00 78.89 O
TER
Atoms:
OP1: (53.017,129.818,-1.205)
OP2: (55.061,129.114,0.194)
C3': (51.341,125.962,1.820)
C1': (52.803,124.171,1.403)
C5': (51.833,127.084,-0.429)
O6: (58.117,124.529,4.173)
O4': (52.616,124.875,0.183)
C8: (54.780,125.735,1.753)
C2: (55.545,122.072,4.015)
C6: (57.036,124.017,3.854)
C5: (56.011,124.555,3.027)
C4: (54.884,123.793,2.785)
P: (53.883,128.747,-0.640)
C4': (51.509,125.808,0.316)
C2': (51.648,124.560,2.326)
O2': (50.583,123.651,2.141)
N1: (56.705,122.745,4.316)
N2: (55.410,120.858,4.550)
N3: (54.588,122.556,3.243)
N7: (55.929,125.779,2.373)
N9: (54.099,124.554,1.955)
O5': (52.959,127.749,0.189)
O3': (50.047,126.428,2.180)
OP2: (55.061,129.114,0.194)
C3': (51.341,125.962,1.820)
C1': (52.803,124.171,1.403)
C5': (51.833,127.084,-0.429)
O6: (58.117,124.529,4.173)
O4': (52.616,124.875,0.183)
C8: (54.780,125.735,1.753)
C2: (55.545,122.072,4.015)
C6: (57.036,124.017,3.854)
C5: (56.011,124.555,3.027)
C4: (54.884,123.793,2.785)
P: (53.883,128.747,-0.640)
C4': (51.509,125.808,0.316)
C2': (51.648,124.560,2.326)
O2': (50.583,123.651,2.141)
N1: (56.705,122.745,4.316)
N2: (55.410,120.858,4.550)
N3: (54.588,122.556,3.243)
N7: (55.929,125.779,2.373)
N9: (54.099,124.554,1.955)
O5': (52.959,127.749,0.189)
O3': (50.047,126.428,2.180)
OP1: (57.678,123.203,13.858)
OP2: (57.286,125.730,13.575)
C3': (58.568,123.525,8.623)
C1': (57.287,124.927,7.231)
C5': (57.914,125.106,10.560)
O6: (55.044,129.731,4.441)
O4': (56.663,124.941,8.498)
C8: (57.896,127.308,6.540)
C2: (53.826,126.467,5.181)
C6: (55.056,128.574,4.882)
C5: (56.098,127.900,5.568)
C4: (55.889,126.600,5.981)
P: (57.289,124.355,13.003)
C4': (57.468,124.189,9.444)
C2': (58.743,124.529,7.485)
O2': (59.347,123.989,6.326)
N1: (53.934,127.761,4.729)
N2: (52.660,125.847,4.935)
N3: (54.789,125.828,5.825)
N7: (57.367,128.333,5.928)
N9: (57.049,126.225,6.609)
O5': (58.248,124.339,11.730)
O3': (58.043,122.279,8.146)
OP2: (57.286,125.730,13.575)
C3': (58.568,123.525,8.623)
C1': (57.287,124.927,7.231)
C5': (57.914,125.106,10.560)
O6: (55.044,129.731,4.441)
O4': (56.663,124.941,8.498)
C8: (57.896,127.308,6.540)
C2: (53.826,126.467,5.181)
C6: (55.056,128.574,4.882)
C5: (56.098,127.900,5.568)
C4: (55.889,126.600,5.981)
P: (57.289,124.355,13.003)
C4': (57.468,124.189,9.444)
C2': (58.743,124.529,7.485)
O2': (59.347,123.989,6.326)
N1: (53.934,127.761,4.729)
N2: (52.660,125.847,4.935)
N3: (54.789,125.828,5.825)
N7: (57.367,128.333,5.928)
N9: (57.049,126.225,6.609)
O5': (58.248,124.339,11.730)
O3': (58.043,122.279,8.146)
Image (generated by PyMOL):