Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 54.416 127.754 -1.929 1.00 75.37 O
ATOM 2 P G A 280 53.883 128.646 -0.698 1.00 75.15 P
ATOM 3 OP1 G A 280 52.990 129.693 -1.266 1.00 74.68 O
ATOM 4 OP2 G A 280 55.063 129.047 0.119 1.00 74.70 O
ATOM 5 O5' G A 280 52.979 127.650 0.159 1.00 74.62 O
ATOM 6 C5' G A 280 51.783 127.054 -0.397 1.00 73.93 C
ATOM 7 C4' G A 280 51.452 125.768 0.332 1.00 73.69 C
ATOM 8 O4' G A 280 52.531 124.812 0.132 1.00 73.31 O
ATOM 9 C3' G A 280 51.339 125.881 1.847 1.00 73.58 C
ATOM 10 O3' G A 280 50.069 126.360 2.274 1.00 75.75 O
ATOM 11 C2' G A 280 51.641 124.459 2.297 1.00 71.81 C
ATOM 12 O2' G A 280 50.565 123.565 2.097 1.00 69.69 O
ATOM 13 C1' G A 280 52.772 124.097 1.336 1.00 71.41 C
ATOM 14 N9 G A 280 54.075 124.509 1.852 1.00 70.22 N
ATOM 15 C8 G A 280 54.742 125.688 1.595 1.00 70.02 C
ATOM 16 N7 G A 280 55.901 125.764 2.192 1.00 69.54 N
ATOM 17 C5 G A 280 56.008 124.565 2.888 1.00 70.13 C
ATOM 18 C6 G A 280 57.056 124.067 3.715 1.00 69.90 C
ATOM 19 O6 G A 280 58.138 124.600 3.995 1.00 70.35 O
ATOM 20 N1 G A 280 56.747 122.807 4.228 1.00 68.97 N
ATOM 21 C2 G A 280 55.588 122.111 3.971 1.00 68.36 C
ATOM 22 N2 G A 280 55.482 120.911 4.546 1.00 67.19 N
ATOM 23 N3 G A 280 54.609 122.559 3.201 1.00 68.41 N
ATOM 24 C4 G A 280 54.884 123.783 2.694 1.00 70.02 C
ATOM 25 P A A 281 49.961 127.233 3.625 1.00 77.71 P
ATOM 26 OP1 A A 281 48.635 127.920 3.587 1.00 76.68 O
ATOM 27 OP2 A A 281 51.207 128.046 3.778 1.00 76.40 O
ATOM 28 O5' A A 281 49.936 126.130 4.777 1.00 74.99 O
TER
ATOM 1 O3' A B 345 55.930 124.079 12.319 1.00 80.16 O
ATOM 2 P G B 346 57.402 124.294 12.943 1.00 81.61 P
ATOM 3 OP1 G B 346 57.751 123.103 13.761 1.00 81.29 O
ATOM 4 OP2 G B 346 57.454 125.647 13.557 1.00 81.59 O
ATOM 5 O5' G B 346 58.356 124.290 11.667 1.00 82.69 O
ATOM 6 C5' G B 346 58.015 125.065 10.505 1.00 83.45 C
ATOM 7 C4' G B 346 57.544 124.156 9.395 1.00 83.96 C
ATOM 8 O4' G B 346 56.737 124.920 8.457 1.00 83.52 O
ATOM 9 C3' G B 346 58.633 123.482 8.567 1.00 83.89 C
ATOM 10 O3' G B 346 58.123 122.221 8.115 1.00 83.83 O
ATOM 11 C2' G B 346 58.789 124.468 7.411 1.00 83.87 C
ATOM 12 O2' G B 346 59.366 123.913 6.246 1.00 85.04 O
ATOM 13 C1' G B 346 57.331 124.871 7.179 1.00 82.83 C
ATOM 14 N9 G B 346 57.102 126.159 6.533 1.00 81.70 N
ATOM 15 C8 G B 346 57.962 127.230 6.437 1.00 80.95 C
ATOM 16 N7 G B 346 57.450 128.240 5.788 1.00 80.18 N
ATOM 17 C5 G B 346 56.177 127.811 5.437 1.00 81.10 C
ATOM 18 C6 G B 346 55.150 128.473 4.717 1.00 82.01 C
ATOM 19 O6 G B 346 55.162 129.608 4.223 1.00 82.70 O
ATOM 20 N1 G B 346 54.015 127.672 4.592 1.00 82.32 N
ATOM 21 C2 G B 346 53.885 126.399 5.095 1.00 81.41 C
ATOM 22 N2 G B 346 52.709 125.793 4.876 1.00 81.25 N
ATOM 23 N3 G B 346 54.837 125.770 5.764 1.00 80.90 N
ATOM 24 C4 G B 346 55.948 126.530 5.895 1.00 81.27 C
ATOM 25 P U B 347 59.122 121.101 7.528 1.00 84.15 P
ATOM 26 OP1 U B 347 60.389 121.098 8.317 1.00 83.74 O
ATOM 27 OP2 U B 347 59.173 121.282 6.051 1.00 83.41 O
ATOM 28 O5' U B 347 58.349 119.732 7.788 1.00 82.73 O
TER
ATOM 2 P G A 280 53.883 128.646 -0.698 1.00 75.15 P
ATOM 3 OP1 G A 280 52.990 129.693 -1.266 1.00 74.68 O
ATOM 4 OP2 G A 280 55.063 129.047 0.119 1.00 74.70 O
ATOM 5 O5' G A 280 52.979 127.650 0.159 1.00 74.62 O
ATOM 6 C5' G A 280 51.783 127.054 -0.397 1.00 73.93 C
ATOM 7 C4' G A 280 51.452 125.768 0.332 1.00 73.69 C
ATOM 8 O4' G A 280 52.531 124.812 0.132 1.00 73.31 O
ATOM 9 C3' G A 280 51.339 125.881 1.847 1.00 73.58 C
ATOM 10 O3' G A 280 50.069 126.360 2.274 1.00 75.75 O
ATOM 11 C2' G A 280 51.641 124.459 2.297 1.00 71.81 C
ATOM 12 O2' G A 280 50.565 123.565 2.097 1.00 69.69 O
ATOM 13 C1' G A 280 52.772 124.097 1.336 1.00 71.41 C
ATOM 14 N9 G A 280 54.075 124.509 1.852 1.00 70.22 N
ATOM 15 C8 G A 280 54.742 125.688 1.595 1.00 70.02 C
ATOM 16 N7 G A 280 55.901 125.764 2.192 1.00 69.54 N
ATOM 17 C5 G A 280 56.008 124.565 2.888 1.00 70.13 C
ATOM 18 C6 G A 280 57.056 124.067 3.715 1.00 69.90 C
ATOM 19 O6 G A 280 58.138 124.600 3.995 1.00 70.35 O
ATOM 20 N1 G A 280 56.747 122.807 4.228 1.00 68.97 N
ATOM 21 C2 G A 280 55.588 122.111 3.971 1.00 68.36 C
ATOM 22 N2 G A 280 55.482 120.911 4.546 1.00 67.19 N
ATOM 23 N3 G A 280 54.609 122.559 3.201 1.00 68.41 N
ATOM 24 C4 G A 280 54.884 123.783 2.694 1.00 70.02 C
ATOM 25 P A A 281 49.961 127.233 3.625 1.00 77.71 P
ATOM 26 OP1 A A 281 48.635 127.920 3.587 1.00 76.68 O
ATOM 27 OP2 A A 281 51.207 128.046 3.778 1.00 76.40 O
ATOM 28 O5' A A 281 49.936 126.130 4.777 1.00 74.99 O
TER
ATOM 1 O3' A B 345 55.930 124.079 12.319 1.00 80.16 O
ATOM 2 P G B 346 57.402 124.294 12.943 1.00 81.61 P
ATOM 3 OP1 G B 346 57.751 123.103 13.761 1.00 81.29 O
ATOM 4 OP2 G B 346 57.454 125.647 13.557 1.00 81.59 O
ATOM 5 O5' G B 346 58.356 124.290 11.667 1.00 82.69 O
ATOM 6 C5' G B 346 58.015 125.065 10.505 1.00 83.45 C
ATOM 7 C4' G B 346 57.544 124.156 9.395 1.00 83.96 C
ATOM 8 O4' G B 346 56.737 124.920 8.457 1.00 83.52 O
ATOM 9 C3' G B 346 58.633 123.482 8.567 1.00 83.89 C
ATOM 10 O3' G B 346 58.123 122.221 8.115 1.00 83.83 O
ATOM 11 C2' G B 346 58.789 124.468 7.411 1.00 83.87 C
ATOM 12 O2' G B 346 59.366 123.913 6.246 1.00 85.04 O
ATOM 13 C1' G B 346 57.331 124.871 7.179 1.00 82.83 C
ATOM 14 N9 G B 346 57.102 126.159 6.533 1.00 81.70 N
ATOM 15 C8 G B 346 57.962 127.230 6.437 1.00 80.95 C
ATOM 16 N7 G B 346 57.450 128.240 5.788 1.00 80.18 N
ATOM 17 C5 G B 346 56.177 127.811 5.437 1.00 81.10 C
ATOM 18 C6 G B 346 55.150 128.473 4.717 1.00 82.01 C
ATOM 19 O6 G B 346 55.162 129.608 4.223 1.00 82.70 O
ATOM 20 N1 G B 346 54.015 127.672 4.592 1.00 82.32 N
ATOM 21 C2 G B 346 53.885 126.399 5.095 1.00 81.41 C
ATOM 22 N2 G B 346 52.709 125.793 4.876 1.00 81.25 N
ATOM 23 N3 G B 346 54.837 125.770 5.764 1.00 80.90 N
ATOM 24 C4 G B 346 55.948 126.530 5.895 1.00 81.27 C
ATOM 25 P U B 347 59.122 121.101 7.528 1.00 84.15 P
ATOM 26 OP1 U B 347 60.389 121.098 8.317 1.00 83.74 O
ATOM 27 OP2 U B 347 59.173 121.282 6.051 1.00 83.41 O
ATOM 28 O5' U B 347 58.349 119.732 7.788 1.00 82.73 O
TER
Atoms:
OP1: (52.990,129.693,-1.266)
OP2: (55.063,129.047,0.119)
C3': (51.339,125.881,1.847)
C1': (52.772,124.097,1.336)
C5': (51.783,127.054,-0.397)
O6: (58.138,124.600,3.995)
O4': (52.531,124.812,0.132)
C8: (54.742,125.688,1.595)
C2: (55.588,122.111,3.971)
C6: (57.056,124.067,3.715)
C5: (56.008,124.565,2.888)
C4: (54.884,123.783,2.694)
P: (53.883,128.646,-0.698)
C4': (51.452,125.768,0.332)
C2': (51.641,124.459,2.297)
O2': (50.565,123.565,2.097)
N1: (56.747,122.807,4.228)
N2: (55.482,120.911,4.546)
N3: (54.609,122.559,3.201)
N7: (55.901,125.764,2.192)
N9: (54.075,124.509,1.852)
O5': (52.979,127.650,0.159)
O3': (50.069,126.360,2.274)
OP2: (55.063,129.047,0.119)
C3': (51.339,125.881,1.847)
C1': (52.772,124.097,1.336)
C5': (51.783,127.054,-0.397)
O6: (58.138,124.600,3.995)
O4': (52.531,124.812,0.132)
C8: (54.742,125.688,1.595)
C2: (55.588,122.111,3.971)
C6: (57.056,124.067,3.715)
C5: (56.008,124.565,2.888)
C4: (54.884,123.783,2.694)
P: (53.883,128.646,-0.698)
C4': (51.452,125.768,0.332)
C2': (51.641,124.459,2.297)
O2': (50.565,123.565,2.097)
N1: (56.747,122.807,4.228)
N2: (55.482,120.911,4.546)
N3: (54.609,122.559,3.201)
N7: (55.901,125.764,2.192)
N9: (54.075,124.509,1.852)
O5': (52.979,127.650,0.159)
O3': (50.069,126.360,2.274)
OP1: (57.751,123.103,13.761)
OP2: (57.454,125.647,13.557)
C3': (58.633,123.482,8.567)
C1': (57.331,124.871,7.179)
C5': (58.015,125.065,10.505)
O6: (55.162,129.608,4.223)
O4': (56.737,124.920,8.457)
C8: (57.962,127.230,6.437)
C2: (53.885,126.399,5.095)
C6: (55.150,128.473,4.717)
C5: (56.177,127.811,5.437)
C4: (55.948,126.530,5.895)
P: (57.402,124.294,12.943)
C4': (57.544,124.156,9.395)
C2': (58.789,124.468,7.411)
O2': (59.366,123.913,6.246)
N1: (54.015,127.672,4.592)
N2: (52.709,125.793,4.876)
N3: (54.837,125.770,5.764)
N7: (57.450,128.240,5.788)
N9: (57.102,126.159,6.533)
O5': (58.356,124.290,11.667)
O3': (58.123,122.221,8.115)
OP2: (57.454,125.647,13.557)
C3': (58.633,123.482,8.567)
C1': (57.331,124.871,7.179)
C5': (58.015,125.065,10.505)
O6: (55.162,129.608,4.223)
O4': (56.737,124.920,8.457)
C8: (57.962,127.230,6.437)
C2: (53.885,126.399,5.095)
C6: (55.150,128.473,4.717)
C5: (56.177,127.811,5.437)
C4: (55.948,126.530,5.895)
P: (57.402,124.294,12.943)
C4': (57.544,124.156,9.395)
C2': (58.789,124.468,7.411)
O2': (59.366,123.913,6.246)
N1: (54.015,127.672,4.592)
N2: (52.709,125.793,4.876)
N3: (54.837,125.770,5.764)
N7: (57.450,128.240,5.788)
N9: (57.102,126.159,6.533)
O5': (58.356,124.290,11.667)
O3': (58.123,122.221,8.115)
Image (generated by PyMOL):