Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 54.509 127.923 -1.869 1.00 84.90 O
ATOM 2 P G A 280 53.985 128.782 -0.617 1.00 84.49 P
ATOM 3 OP1 G A 280 53.123 129.869 -1.148 1.00 84.19 O
ATOM 4 OP2 G A 280 55.155 129.121 0.233 1.00 84.41 O
ATOM 5 O5' G A 280 53.055 127.768 0.186 1.00 85.43 O
ATOM 6 C5' G A 280 51.891 127.172 -0.428 1.00 85.93 C
ATOM 7 C4' G A 280 51.501 125.911 0.311 1.00 86.25 C
ATOM 8 O4' G A 280 52.563 124.927 0.173 1.00 86.33 O
ATOM 9 C3' G A 280 51.339 126.070 1.815 1.00 86.55 C
ATOM 10 O3' G A 280 50.065 126.595 2.177 1.00 88.21 O
ATOM 11 C2' G A 280 51.598 124.657 2.318 1.00 85.28 C
ATOM 12 O2' G A 280 50.504 123.784 2.127 1.00 84.07 O
ATOM 13 C1' G A 280 52.742 124.233 1.398 1.00 85.06 C
ATOM 14 N9 G A 280 54.046 124.609 1.939 1.00 84.53 N
ATOM 15 C8 G A 280 54.719 125.793 1.739 1.00 84.35 C
ATOM 16 N7 G A 280 55.866 125.844 2.359 1.00 83.94 N
ATOM 17 C5 G A 280 55.958 124.620 3.009 1.00 84.79 C
ATOM 18 C6 G A 280 56.983 124.094 3.840 1.00 84.73 C
ATOM 19 O6 G A 280 58.052 124.621 4.172 1.00 84.83 O
ATOM 20 N1 G A 280 56.668 122.816 4.293 1.00 84.10 N
ATOM 21 C2 G A 280 55.518 122.130 3.985 1.00 83.38 C
ATOM 22 N2 G A 280 55.396 120.913 4.517 1.00 82.70 N
ATOM 23 N3 G A 280 54.559 122.605 3.209 1.00 83.67 N
ATOM 24 C4 G A 280 54.842 123.846 2.759 1.00 84.58 C
ATOM 25 P A A 281 49.904 127.418 3.553 1.00 88.92 P
ATOM 26 OP1 A A 281 48.599 128.138 3.482 1.00 88.16 O
ATOM 27 OP2 A A 281 51.155 128.190 3.797 1.00 87.17 O
ATOM 28 O5' A A 281 49.803 126.269 4.654 1.00 87.66 O
TER
ATOM 1 O3' A B 345 55.986 124.032 12.295 1.00 90.98 O
ATOM 2 P G B 346 57.401 124.362 12.987 1.00 92.27 P
ATOM 3 OP1 G B 346 57.803 123.199 13.820 1.00 92.78 O
ATOM 4 OP2 G B 346 57.313 125.714 13.601 1.00 91.74 O
ATOM 5 O5' G B 346 58.410 124.430 11.756 1.00 93.64 O
ATOM 6 C5' G B 346 58.074 125.188 10.585 1.00 93.86 C
ATOM 7 C4' G B 346 57.552 124.271 9.503 1.00 93.87 C
ATOM 8 O4' G B 346 56.721 125.040 8.595 1.00 94.03 O
ATOM 9 C3' G B 346 58.593 123.573 8.632 1.00 93.67 C
ATOM 10 O3' G B 346 58.026 122.328 8.196 1.00 92.88 O
ATOM 11 C2' G B 346 58.733 124.564 7.477 1.00 93.65 C
ATOM 12 O2' G B 346 59.253 124.000 6.292 1.00 94.20 O
ATOM 13 C1' G B 346 57.277 124.999 7.298 1.00 93.37 C
ATOM 14 N9 G B 346 57.042 126.299 6.679 1.00 92.36 N
ATOM 15 C8 G B 346 57.879 127.389 6.639 1.00 91.95 C
ATOM 16 N7 G B 346 57.355 128.414 6.022 1.00 91.70 N
ATOM 17 C5 G B 346 56.099 127.971 5.629 1.00 92.04 C
ATOM 18 C6 G B 346 55.066 128.640 4.924 1.00 92.79 C
ATOM 19 O6 G B 346 55.051 129.802 4.495 1.00 93.48 O
ATOM 20 N1 G B 346 53.959 127.816 4.737 1.00 93.02 N
ATOM 21 C2 G B 346 53.856 126.517 5.175 1.00 92.35 C
ATOM 22 N2 G B 346 52.707 125.885 4.896 1.00 92.71 N
ATOM 23 N3 G B 346 54.808 125.885 5.836 1.00 91.35 N
ATOM 24 C4 G B 346 55.894 126.667 6.025 1.00 92.03 C
ATOM 25 P U B 347 58.951 121.208 7.494 1.00 92.08 P
ATOM 26 OP1 U B 347 60.273 121.144 8.178 1.00 91.54 O
ATOM 27 OP2 U B 347 58.892 121.433 6.025 1.00 91.74 O
ATOM 28 O5' U B 347 58.165 119.848 7.764 1.00 91.89 O
TER
ATOM 2 P G A 280 53.985 128.782 -0.617 1.00 84.49 P
ATOM 3 OP1 G A 280 53.123 129.869 -1.148 1.00 84.19 O
ATOM 4 OP2 G A 280 55.155 129.121 0.233 1.00 84.41 O
ATOM 5 O5' G A 280 53.055 127.768 0.186 1.00 85.43 O
ATOM 6 C5' G A 280 51.891 127.172 -0.428 1.00 85.93 C
ATOM 7 C4' G A 280 51.501 125.911 0.311 1.00 86.25 C
ATOM 8 O4' G A 280 52.563 124.927 0.173 1.00 86.33 O
ATOM 9 C3' G A 280 51.339 126.070 1.815 1.00 86.55 C
ATOM 10 O3' G A 280 50.065 126.595 2.177 1.00 88.21 O
ATOM 11 C2' G A 280 51.598 124.657 2.318 1.00 85.28 C
ATOM 12 O2' G A 280 50.504 123.784 2.127 1.00 84.07 O
ATOM 13 C1' G A 280 52.742 124.233 1.398 1.00 85.06 C
ATOM 14 N9 G A 280 54.046 124.609 1.939 1.00 84.53 N
ATOM 15 C8 G A 280 54.719 125.793 1.739 1.00 84.35 C
ATOM 16 N7 G A 280 55.866 125.844 2.359 1.00 83.94 N
ATOM 17 C5 G A 280 55.958 124.620 3.009 1.00 84.79 C
ATOM 18 C6 G A 280 56.983 124.094 3.840 1.00 84.73 C
ATOM 19 O6 G A 280 58.052 124.621 4.172 1.00 84.83 O
ATOM 20 N1 G A 280 56.668 122.816 4.293 1.00 84.10 N
ATOM 21 C2 G A 280 55.518 122.130 3.985 1.00 83.38 C
ATOM 22 N2 G A 280 55.396 120.913 4.517 1.00 82.70 N
ATOM 23 N3 G A 280 54.559 122.605 3.209 1.00 83.67 N
ATOM 24 C4 G A 280 54.842 123.846 2.759 1.00 84.58 C
ATOM 25 P A A 281 49.904 127.418 3.553 1.00 88.92 P
ATOM 26 OP1 A A 281 48.599 128.138 3.482 1.00 88.16 O
ATOM 27 OP2 A A 281 51.155 128.190 3.797 1.00 87.17 O
ATOM 28 O5' A A 281 49.803 126.269 4.654 1.00 87.66 O
TER
ATOM 1 O3' A B 345 55.986 124.032 12.295 1.00 90.98 O
ATOM 2 P G B 346 57.401 124.362 12.987 1.00 92.27 P
ATOM 3 OP1 G B 346 57.803 123.199 13.820 1.00 92.78 O
ATOM 4 OP2 G B 346 57.313 125.714 13.601 1.00 91.74 O
ATOM 5 O5' G B 346 58.410 124.430 11.756 1.00 93.64 O
ATOM 6 C5' G B 346 58.074 125.188 10.585 1.00 93.86 C
ATOM 7 C4' G B 346 57.552 124.271 9.503 1.00 93.87 C
ATOM 8 O4' G B 346 56.721 125.040 8.595 1.00 94.03 O
ATOM 9 C3' G B 346 58.593 123.573 8.632 1.00 93.67 C
ATOM 10 O3' G B 346 58.026 122.328 8.196 1.00 92.88 O
ATOM 11 C2' G B 346 58.733 124.564 7.477 1.00 93.65 C
ATOM 12 O2' G B 346 59.253 124.000 6.292 1.00 94.20 O
ATOM 13 C1' G B 346 57.277 124.999 7.298 1.00 93.37 C
ATOM 14 N9 G B 346 57.042 126.299 6.679 1.00 92.36 N
ATOM 15 C8 G B 346 57.879 127.389 6.639 1.00 91.95 C
ATOM 16 N7 G B 346 57.355 128.414 6.022 1.00 91.70 N
ATOM 17 C5 G B 346 56.099 127.971 5.629 1.00 92.04 C
ATOM 18 C6 G B 346 55.066 128.640 4.924 1.00 92.79 C
ATOM 19 O6 G B 346 55.051 129.802 4.495 1.00 93.48 O
ATOM 20 N1 G B 346 53.959 127.816 4.737 1.00 93.02 N
ATOM 21 C2 G B 346 53.856 126.517 5.175 1.00 92.35 C
ATOM 22 N2 G B 346 52.707 125.885 4.896 1.00 92.71 N
ATOM 23 N3 G B 346 54.808 125.885 5.836 1.00 91.35 N
ATOM 24 C4 G B 346 55.894 126.667 6.025 1.00 92.03 C
ATOM 25 P U B 347 58.951 121.208 7.494 1.00 92.08 P
ATOM 26 OP1 U B 347 60.273 121.144 8.178 1.00 91.54 O
ATOM 27 OP2 U B 347 58.892 121.433 6.025 1.00 91.74 O
ATOM 28 O5' U B 347 58.165 119.848 7.764 1.00 91.89 O
TER
Atoms:
OP1: (53.123,129.869,-1.148)
OP2: (55.155,129.121,0.233)
C3': (51.339,126.070,1.815)
C1': (52.742,124.233,1.398)
C5': (51.891,127.172,-0.428)
O6: (58.052,124.621,4.172)
O4': (52.563,124.927,0.173)
C8: (54.719,125.793,1.739)
C2: (55.518,122.130,3.985)
C6: (56.983,124.094,3.840)
C5: (55.958,124.620,3.009)
C4: (54.842,123.846,2.759)
P: (53.985,128.782,-0.617)
C4': (51.501,125.911,0.311)
C2': (51.598,124.657,2.318)
O2': (50.504,123.784,2.127)
N1: (56.668,122.816,4.293)
N2: (55.396,120.913,4.517)
N3: (54.559,122.605,3.209)
N7: (55.866,125.844,2.359)
N9: (54.046,124.609,1.939)
O5': (53.055,127.768,0.186)
O3': (50.065,126.595,2.177)
OP2: (55.155,129.121,0.233)
C3': (51.339,126.070,1.815)
C1': (52.742,124.233,1.398)
C5': (51.891,127.172,-0.428)
O6: (58.052,124.621,4.172)
O4': (52.563,124.927,0.173)
C8: (54.719,125.793,1.739)
C2: (55.518,122.130,3.985)
C6: (56.983,124.094,3.840)
C5: (55.958,124.620,3.009)
C4: (54.842,123.846,2.759)
P: (53.985,128.782,-0.617)
C4': (51.501,125.911,0.311)
C2': (51.598,124.657,2.318)
O2': (50.504,123.784,2.127)
N1: (56.668,122.816,4.293)
N2: (55.396,120.913,4.517)
N3: (54.559,122.605,3.209)
N7: (55.866,125.844,2.359)
N9: (54.046,124.609,1.939)
O5': (53.055,127.768,0.186)
O3': (50.065,126.595,2.177)
OP1: (57.803,123.199,13.820)
OP2: (57.313,125.714,13.601)
C3': (58.593,123.573,8.632)
C1': (57.277,124.999,7.298)
C5': (58.074,125.188,10.585)
O6: (55.051,129.802,4.495)
O4': (56.721,125.040,8.595)
C8: (57.879,127.389,6.639)
C2: (53.856,126.517,5.175)
C6: (55.066,128.640,4.924)
C5: (56.099,127.971,5.629)
C4: (55.894,126.667,6.025)
P: (57.401,124.362,12.987)
C4': (57.552,124.271,9.503)
C2': (58.733,124.564,7.477)
O2': (59.253,124.000,6.292)
N1: (53.959,127.816,4.737)
N2: (52.707,125.885,4.896)
N3: (54.808,125.885,5.836)
N7: (57.355,128.414,6.022)
N9: (57.042,126.299,6.679)
O5': (58.410,124.430,11.756)
O3': (58.026,122.328,8.196)
OP2: (57.313,125.714,13.601)
C3': (58.593,123.573,8.632)
C1': (57.277,124.999,7.298)
C5': (58.074,125.188,10.585)
O6: (55.051,129.802,4.495)
O4': (56.721,125.040,8.595)
C8: (57.879,127.389,6.639)
C2: (53.856,126.517,5.175)
C6: (55.066,128.640,4.924)
C5: (56.099,127.971,5.629)
C4: (55.894,126.667,6.025)
P: (57.401,124.362,12.987)
C4': (57.552,124.271,9.503)
C2': (58.733,124.564,7.477)
O2': (59.253,124.000,6.292)
N1: (53.959,127.816,4.737)
N2: (52.707,125.885,4.896)
N3: (54.808,125.885,5.836)
N7: (57.355,128.414,6.022)
N9: (57.042,126.299,6.679)
O5': (58.410,124.430,11.756)
O3': (58.026,122.328,8.196)
Image (generated by PyMOL):