Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 54.454 127.885 -1.888 1.00 89.59 O
ATOM 2 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 3 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 4 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 5 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
ATOM 6 C5' G A 280 51.806 127.082 -0.435 1.00 90.13 C
ATOM 7 C4' G A 280 51.418 125.822 0.308 1.00 90.20 C
ATOM 8 O4' G A 280 52.479 124.837 0.163 1.00 90.13 O
ATOM 9 C3' G A 280 51.257 125.979 1.812 1.00 90.55 C
ATOM 10 O3' G A 280 49.975 126.491 2.172 1.00 91.67 O
ATOM 11 C2' G A 280 51.529 124.567 2.315 1.00 89.43 C
ATOM 12 O2' G A 280 50.441 123.684 2.128 1.00 88.86 O
ATOM 13 C1' G A 280 52.672 124.150 1.390 1.00 89.23 C
ATOM 14 N9 G A 280 53.980 124.534 1.918 1.00 88.98 N
ATOM 15 C8 G A 280 54.647 125.720 1.705 1.00 88.99 C
ATOM 16 N7 G A 280 55.796 125.782 2.320 1.00 88.68 N
ATOM 17 C5 G A 280 55.897 124.564 2.979 1.00 89.49 C
ATOM 18 C6 G A 280 56.928 124.053 3.812 1.00 89.44 C
ATOM 19 O6 G A 280 57.992 124.592 4.139 1.00 89.64 O
ATOM 20 N1 G A 280 56.623 122.775 4.275 1.00 88.99 N
ATOM 21 C2 G A 280 55.478 122.077 3.972 1.00 88.54 C
ATOM 22 N2 G A 280 55.368 120.860 4.511 1.00 88.22 N
ATOM 23 N3 G A 280 54.512 122.540 3.197 1.00 88.45 N
ATOM 24 C4 G A 280 54.784 123.780 2.738 1.00 89.15 C
ATOM 25 P A A 281 49.812 127.356 3.522 1.00 92.24 P
ATOM 26 OP1 A A 281 48.489 128.037 3.444 1.00 91.31 O
ATOM 27 OP2 A A 281 51.046 128.169 3.724 1.00 90.89 O
ATOM 28 O5' A A 281 49.755 126.244 4.663 1.00 91.25 O
TER
ATOM 1 O3' A B 345 56.055 123.851 12.262 1.00 96.88 O
ATOM 2 P G B 346 57.454 124.242 12.955 1.00 98.21 P
ATOM 3 OP1 G B 346 57.903 123.105 13.800 1.00 98.31 O
ATOM 4 OP2 G B 346 57.306 125.593 13.556 1.00 97.78 O
ATOM 5 O5' G B 346 58.460 124.344 11.723 1.00 99.80 O
ATOM 6 C5' G B 346 58.110 125.112 10.561 1.00100.19 C
ATOM 7 C4' G B 346 57.592 124.202 9.471 1.00100.52 C
ATOM 8 O4' G B 346 56.749 124.973 8.577 1.00100.44 O
ATOM 9 C3' G B 346 58.634 123.523 8.588 1.00100.38 C
ATOM 10 O3' G B 346 58.080 122.278 8.137 1.00100.13 O
ATOM 11 C2' G B 346 58.757 124.524 7.440 1.00100.33 C
ATOM 12 O2' G B 346 59.271 123.972 6.245 1.00100.76 O
ATOM 13 C1' G B 346 57.298 124.953 7.277 1.00 99.70 C
ATOM 14 N9 G B 346 57.055 126.262 6.680 1.00 98.29 N
ATOM 15 C8 G B 346 57.886 127.358 6.660 1.00 97.73 C
ATOM 16 N7 G B 346 57.357 128.389 6.060 1.00 97.24 N
ATOM 17 C5 G B 346 56.105 127.946 5.658 1.00 97.48 C
ATOM 18 C6 G B 346 55.071 128.621 4.963 1.00 98.42 C
ATOM 19 O6 G B 346 55.052 129.790 4.553 1.00 99.55 O
ATOM 20 N1 G B 346 53.968 127.795 4.759 1.00 98.43 N
ATOM 21 C2 G B 346 53.871 126.488 5.175 1.00 97.62 C
ATOM 22 N2 G B 346 52.725 125.854 4.882 1.00 97.41 N
ATOM 23 N3 G B 346 54.826 125.850 5.827 1.00 96.78 N
ATOM 24 C4 G B 346 55.907 126.634 6.031 1.00 97.68 C
ATOM 25 P U B 347 59.033 121.133 7.521 1.00 99.88 P
ATOM 26 OP1 U B 347 60.309 121.072 8.287 1.00 99.01 O
ATOM 27 OP2 U B 347 59.070 121.319 6.045 1.00 99.53 O
ATOM 28 O5' U B 347 58.212 119.791 7.777 1.00 99.69 O
TER
ATOM 2 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 3 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 4 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 5 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
ATOM 6 C5' G A 280 51.806 127.082 -0.435 1.00 90.13 C
ATOM 7 C4' G A 280 51.418 125.822 0.308 1.00 90.20 C
ATOM 8 O4' G A 280 52.479 124.837 0.163 1.00 90.13 O
ATOM 9 C3' G A 280 51.257 125.979 1.812 1.00 90.55 C
ATOM 10 O3' G A 280 49.975 126.491 2.172 1.00 91.67 O
ATOM 11 C2' G A 280 51.529 124.567 2.315 1.00 89.43 C
ATOM 12 O2' G A 280 50.441 123.684 2.128 1.00 88.86 O
ATOM 13 C1' G A 280 52.672 124.150 1.390 1.00 89.23 C
ATOM 14 N9 G A 280 53.980 124.534 1.918 1.00 88.98 N
ATOM 15 C8 G A 280 54.647 125.720 1.705 1.00 88.99 C
ATOM 16 N7 G A 280 55.796 125.782 2.320 1.00 88.68 N
ATOM 17 C5 G A 280 55.897 124.564 2.979 1.00 89.49 C
ATOM 18 C6 G A 280 56.928 124.053 3.812 1.00 89.44 C
ATOM 19 O6 G A 280 57.992 124.592 4.139 1.00 89.64 O
ATOM 20 N1 G A 280 56.623 122.775 4.275 1.00 88.99 N
ATOM 21 C2 G A 280 55.478 122.077 3.972 1.00 88.54 C
ATOM 22 N2 G A 280 55.368 120.860 4.511 1.00 88.22 N
ATOM 23 N3 G A 280 54.512 122.540 3.197 1.00 88.45 N
ATOM 24 C4 G A 280 54.784 123.780 2.738 1.00 89.15 C
ATOM 25 P A A 281 49.812 127.356 3.522 1.00 92.24 P
ATOM 26 OP1 A A 281 48.489 128.037 3.444 1.00 91.31 O
ATOM 27 OP2 A A 281 51.046 128.169 3.724 1.00 90.89 O
ATOM 28 O5' A A 281 49.755 126.244 4.663 1.00 91.25 O
TER
ATOM 1 O3' A B 345 56.055 123.851 12.262 1.00 96.88 O
ATOM 2 P G B 346 57.454 124.242 12.955 1.00 98.21 P
ATOM 3 OP1 G B 346 57.903 123.105 13.800 1.00 98.31 O
ATOM 4 OP2 G B 346 57.306 125.593 13.556 1.00 97.78 O
ATOM 5 O5' G B 346 58.460 124.344 11.723 1.00 99.80 O
ATOM 6 C5' G B 346 58.110 125.112 10.561 1.00100.19 C
ATOM 7 C4' G B 346 57.592 124.202 9.471 1.00100.52 C
ATOM 8 O4' G B 346 56.749 124.973 8.577 1.00100.44 O
ATOM 9 C3' G B 346 58.634 123.523 8.588 1.00100.38 C
ATOM 10 O3' G B 346 58.080 122.278 8.137 1.00100.13 O
ATOM 11 C2' G B 346 58.757 124.524 7.440 1.00100.33 C
ATOM 12 O2' G B 346 59.271 123.972 6.245 1.00100.76 O
ATOM 13 C1' G B 346 57.298 124.953 7.277 1.00 99.70 C
ATOM 14 N9 G B 346 57.055 126.262 6.680 1.00 98.29 N
ATOM 15 C8 G B 346 57.886 127.358 6.660 1.00 97.73 C
ATOM 16 N7 G B 346 57.357 128.389 6.060 1.00 97.24 N
ATOM 17 C5 G B 346 56.105 127.946 5.658 1.00 97.48 C
ATOM 18 C6 G B 346 55.071 128.621 4.963 1.00 98.42 C
ATOM 19 O6 G B 346 55.052 129.790 4.553 1.00 99.55 O
ATOM 20 N1 G B 346 53.968 127.795 4.759 1.00 98.43 N
ATOM 21 C2 G B 346 53.871 126.488 5.175 1.00 97.62 C
ATOM 22 N2 G B 346 52.725 125.854 4.882 1.00 97.41 N
ATOM 23 N3 G B 346 54.826 125.850 5.827 1.00 96.78 N
ATOM 24 C4 G B 346 55.907 126.634 6.031 1.00 97.68 C
ATOM 25 P U B 347 59.033 121.133 7.521 1.00 99.88 P
ATOM 26 OP1 U B 347 60.309 121.072 8.287 1.00 99.01 O
ATOM 27 OP2 U B 347 59.070 121.319 6.045 1.00 99.53 O
ATOM 28 O5' U B 347 58.212 119.791 7.777 1.00 99.69 O
TER
Atoms:
OP1: (52.975,129.768,-1.176)
OP2: (55.032,129.112,0.218)
C3': (51.257,125.979,1.812)
C1': (52.672,124.150,1.390)
C5': (51.806,127.082,-0.435)
O6: (57.992,124.592,4.139)
O4': (52.479,124.837,0.163)
C8: (54.647,125.720,1.705)
C2: (55.478,122.077,3.972)
C6: (56.928,124.053,3.812)
C5: (55.897,124.564,2.979)
C4: (54.784,123.780,2.738)
P: (53.882,128.720,-0.638)
C4': (51.418,125.822,0.308)
C2': (51.529,124.567,2.315)
O2': (50.441,123.684,2.128)
N1: (56.623,122.775,4.275)
N2: (55.368,120.860,4.511)
N3: (54.512,122.540,3.197)
N7: (55.796,125.782,2.320)
N9: (53.980,124.534,1.918)
O5': (52.990,127.666,0.159)
O3': (49.975,126.491,2.172)
OP2: (55.032,129.112,0.218)
C3': (51.257,125.979,1.812)
C1': (52.672,124.150,1.390)
C5': (51.806,127.082,-0.435)
O6: (57.992,124.592,4.139)
O4': (52.479,124.837,0.163)
C8: (54.647,125.720,1.705)
C2: (55.478,122.077,3.972)
C6: (56.928,124.053,3.812)
C5: (55.897,124.564,2.979)
C4: (54.784,123.780,2.738)
P: (53.882,128.720,-0.638)
C4': (51.418,125.822,0.308)
C2': (51.529,124.567,2.315)
O2': (50.441,123.684,2.128)
N1: (56.623,122.775,4.275)
N2: (55.368,120.860,4.511)
N3: (54.512,122.540,3.197)
N7: (55.796,125.782,2.320)
N9: (53.980,124.534,1.918)
O5': (52.990,127.666,0.159)
O3': (49.975,126.491,2.172)
OP1: (57.903,123.105,13.800)
OP2: (57.306,125.593,13.556)
C3': (58.634,123.523,8.588)
C1': (57.298,124.953,7.277)
C5': (58.110,125.112,10.561)
O6: (55.052,129.790,4.553)
O4': (56.749,124.973,8.577)
C8: (57.886,127.358,6.660)
C2: (53.871,126.488,5.175)
C6: (55.071,128.621,4.963)
C5: (56.105,127.946,5.658)
C4: (55.907,126.634,6.031)
P: (57.454,124.242,12.955)
C4': (57.592,124.202,9.471)
C2': (58.757,124.524,7.440)
O2': (59.271,123.972,6.245)
N1: (53.968,127.795,4.759)
N2: (52.725,125.854,4.882)
N3: (54.826,125.850,5.827)
N7: (57.357,128.389,6.060)
N9: (57.055,126.262,6.680)
O5': (58.460,124.344,11.723)
O3': (58.080,122.278,8.137)
OP2: (57.306,125.593,13.556)
C3': (58.634,123.523,8.588)
C1': (57.298,124.953,7.277)
C5': (58.110,125.112,10.561)
O6: (55.052,129.790,4.553)
O4': (56.749,124.973,8.577)
C8: (57.886,127.358,6.660)
C2: (53.871,126.488,5.175)
C6: (55.071,128.621,4.963)
C5: (56.105,127.946,5.658)
C4: (55.907,126.634,6.031)
P: (57.454,124.242,12.955)
C4': (57.592,124.202,9.471)
C2': (58.757,124.524,7.440)
O2': (59.271,123.972,6.245)
N1: (53.968,127.795,4.759)
N2: (52.725,125.854,4.882)
N3: (54.826,125.850,5.827)
N7: (57.357,128.389,6.060)
N9: (57.055,126.262,6.680)
O5': (58.460,124.344,11.723)
O3': (58.080,122.278,8.137)
Image (generated by PyMOL):