Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0280:0346
Extra
PDB:
ATOM 1 O3' C A 279 54.633 128.077 -1.849 1.00 89.83 O
ATOM 2 P G A 280 54.024 128.882 -0.598 1.00 89.61 P
ATOM 3 OP1 G A 280 53.101 129.917 -1.138 1.00 88.73 O
ATOM 4 OP2 G A 280 55.152 129.290 0.278 1.00 89.37 O
ATOM 5 O5' G A 280 53.153 127.796 0.180 1.00 90.43 O
ATOM 6 C5' G A 280 51.991 127.182 -0.429 1.00 90.67 C
ATOM 7 C4' G A 280 51.605 125.930 0.330 1.00 90.84 C
ATOM 8 O4' G A 280 52.667 124.944 0.204 1.00 90.89 O
ATOM 9 C3' G A 280 51.443 126.115 1.831 1.00 91.49 C
ATOM 10 O3' G A 280 50.163 126.629 2.186 1.00 93.23 O
ATOM 11 C2' G A 280 51.717 124.715 2.363 1.00 90.27 C
ATOM 12 O2' G A 280 50.623 123.835 2.206 1.00 89.81 O
ATOM 13 C1' G A 280 52.856 124.277 1.443 1.00 89.81 C
ATOM 14 N9 G A 280 54.164 124.663 1.967 1.00 89.17 N
ATOM 15 C8 G A 280 54.833 125.847 1.745 1.00 89.05 C
ATOM 16 N7 G A 280 55.986 125.909 2.354 1.00 88.79 N
ATOM 17 C5 G A 280 56.088 124.693 3.018 1.00 89.47 C
ATOM 18 C6 G A 280 57.124 124.179 3.847 1.00 89.39 C
ATOM 19 O6 G A 280 58.197 124.712 4.160 1.00 89.03 O
ATOM 20 N1 G A 280 56.815 122.907 4.321 1.00 89.04 N
ATOM 21 C2 G A 280 55.665 122.213 4.032 1.00 88.78 C
ATOM 22 N2 G A 280 55.552 121.001 4.583 1.00 88.56 N
ATOM 23 N3 G A 280 54.696 122.676 3.259 1.00 88.82 N
ATOM 24 C4 G A 280 54.971 123.913 2.790 1.00 89.40 C
ATOM 25 P A A 281 49.999 127.491 3.538 1.00 94.23 P
ATOM 26 OP1 A A 281 48.699 128.214 3.439 1.00 93.45 O
ATOM 27 OP2 A A 281 51.253 128.263 3.762 1.00 93.18 O
ATOM 28 O5' A A 281 49.894 126.380 4.677 1.00 93.00 O
TER
ATOM 1 O3' A B 345 56.014 124.081 12.370 1.00 93.05 O
ATOM 2 P G B 346 57.443 124.396 13.044 1.00 94.26 P
ATOM 3 OP1 G B 346 57.853 123.229 13.866 1.00 94.51 O
ATOM 4 OP2 G B 346 57.368 125.744 13.665 1.00 94.40 O
ATOM 5 O5' G B 346 58.438 124.466 11.802 1.00 95.55 O
ATOM 6 C5' G B 346 58.083 125.214 10.630 1.00 95.36 C
ATOM 7 C4' G B 346 57.597 124.281 9.543 1.00 95.26 C
ATOM 8 O4' G B 346 56.774 125.030 8.611 1.00 94.73 O
ATOM 9 C3' G B 346 58.665 123.592 8.701 1.00 94.87 C
ATOM 10 O3' G B 346 58.120 122.339 8.268 1.00 94.69 O
ATOM 11 C2' G B 346 58.818 124.578 7.543 1.00 94.69 C
ATOM 12 O2' G B 346 59.369 124.027 6.364 1.00 95.14 O
ATOM 13 C1' G B 346 57.364 124.999 7.329 1.00 93.87 C
ATOM 14 N9 G B 346 57.140 126.301 6.713 1.00 92.11 N
ATOM 15 C8 G B 346 58.002 127.371 6.644 1.00 91.56 C
ATOM 16 N7 G B 346 57.482 128.406 6.042 1.00 91.33 N
ATOM 17 C5 G B 346 56.206 127.992 5.689 1.00 91.37 C
ATOM 18 C6 G B 346 55.168 128.683 5.015 1.00 92.36 C
ATOM 19 O6 G B 346 55.169 129.842 4.578 1.00 92.73 O
ATOM 20 N1 G B 346 54.036 127.886 4.867 1.00 92.81 N
ATOM 21 C2 G B 346 53.916 126.590 5.312 1.00 91.67 C
ATOM 22 N2 G B 346 52.743 125.984 5.074 1.00 91.86 N
ATOM 23 N3 G B 346 54.875 125.938 5.942 1.00 90.55 N
ATOM 24 C4 G B 346 55.983 126.694 6.094 1.00 91.26 C
ATOM 25 P U B 347 59.060 121.236 7.567 1.00 94.11 P
ATOM 26 OP1 U B 347 60.381 121.181 8.252 1.00 92.98 O
ATOM 27 OP2 U B 347 59.001 121.475 6.102 1.00 94.19 O
ATOM 28 O5' U B 347 58.286 119.867 7.820 1.00 94.29 O
TER
ATOM 2 P G A 280 54.024 128.882 -0.598 1.00 89.61 P
ATOM 3 OP1 G A 280 53.101 129.917 -1.138 1.00 88.73 O
ATOM 4 OP2 G A 280 55.152 129.290 0.278 1.00 89.37 O
ATOM 5 O5' G A 280 53.153 127.796 0.180 1.00 90.43 O
ATOM 6 C5' G A 280 51.991 127.182 -0.429 1.00 90.67 C
ATOM 7 C4' G A 280 51.605 125.930 0.330 1.00 90.84 C
ATOM 8 O4' G A 280 52.667 124.944 0.204 1.00 90.89 O
ATOM 9 C3' G A 280 51.443 126.115 1.831 1.00 91.49 C
ATOM 10 O3' G A 280 50.163 126.629 2.186 1.00 93.23 O
ATOM 11 C2' G A 280 51.717 124.715 2.363 1.00 90.27 C
ATOM 12 O2' G A 280 50.623 123.835 2.206 1.00 89.81 O
ATOM 13 C1' G A 280 52.856 124.277 1.443 1.00 89.81 C
ATOM 14 N9 G A 280 54.164 124.663 1.967 1.00 89.17 N
ATOM 15 C8 G A 280 54.833 125.847 1.745 1.00 89.05 C
ATOM 16 N7 G A 280 55.986 125.909 2.354 1.00 88.79 N
ATOM 17 C5 G A 280 56.088 124.693 3.018 1.00 89.47 C
ATOM 18 C6 G A 280 57.124 124.179 3.847 1.00 89.39 C
ATOM 19 O6 G A 280 58.197 124.712 4.160 1.00 89.03 O
ATOM 20 N1 G A 280 56.815 122.907 4.321 1.00 89.04 N
ATOM 21 C2 G A 280 55.665 122.213 4.032 1.00 88.78 C
ATOM 22 N2 G A 280 55.552 121.001 4.583 1.00 88.56 N
ATOM 23 N3 G A 280 54.696 122.676 3.259 1.00 88.82 N
ATOM 24 C4 G A 280 54.971 123.913 2.790 1.00 89.40 C
ATOM 25 P A A 281 49.999 127.491 3.538 1.00 94.23 P
ATOM 26 OP1 A A 281 48.699 128.214 3.439 1.00 93.45 O
ATOM 27 OP2 A A 281 51.253 128.263 3.762 1.00 93.18 O
ATOM 28 O5' A A 281 49.894 126.380 4.677 1.00 93.00 O
TER
ATOM 1 O3' A B 345 56.014 124.081 12.370 1.00 93.05 O
ATOM 2 P G B 346 57.443 124.396 13.044 1.00 94.26 P
ATOM 3 OP1 G B 346 57.853 123.229 13.866 1.00 94.51 O
ATOM 4 OP2 G B 346 57.368 125.744 13.665 1.00 94.40 O
ATOM 5 O5' G B 346 58.438 124.466 11.802 1.00 95.55 O
ATOM 6 C5' G B 346 58.083 125.214 10.630 1.00 95.36 C
ATOM 7 C4' G B 346 57.597 124.281 9.543 1.00 95.26 C
ATOM 8 O4' G B 346 56.774 125.030 8.611 1.00 94.73 O
ATOM 9 C3' G B 346 58.665 123.592 8.701 1.00 94.87 C
ATOM 10 O3' G B 346 58.120 122.339 8.268 1.00 94.69 O
ATOM 11 C2' G B 346 58.818 124.578 7.543 1.00 94.69 C
ATOM 12 O2' G B 346 59.369 124.027 6.364 1.00 95.14 O
ATOM 13 C1' G B 346 57.364 124.999 7.329 1.00 93.87 C
ATOM 14 N9 G B 346 57.140 126.301 6.713 1.00 92.11 N
ATOM 15 C8 G B 346 58.002 127.371 6.644 1.00 91.56 C
ATOM 16 N7 G B 346 57.482 128.406 6.042 1.00 91.33 N
ATOM 17 C5 G B 346 56.206 127.992 5.689 1.00 91.37 C
ATOM 18 C6 G B 346 55.168 128.683 5.015 1.00 92.36 C
ATOM 19 O6 G B 346 55.169 129.842 4.578 1.00 92.73 O
ATOM 20 N1 G B 346 54.036 127.886 4.867 1.00 92.81 N
ATOM 21 C2 G B 346 53.916 126.590 5.312 1.00 91.67 C
ATOM 22 N2 G B 346 52.743 125.984 5.074 1.00 91.86 N
ATOM 23 N3 G B 346 54.875 125.938 5.942 1.00 90.55 N
ATOM 24 C4 G B 346 55.983 126.694 6.094 1.00 91.26 C
ATOM 25 P U B 347 59.060 121.236 7.567 1.00 94.11 P
ATOM 26 OP1 U B 347 60.381 121.181 8.252 1.00 92.98 O
ATOM 27 OP2 U B 347 59.001 121.475 6.102 1.00 94.19 O
ATOM 28 O5' U B 347 58.286 119.867 7.820 1.00 94.29 O
TER
Atoms:
OP1: (53.101,129.917,-1.138)
OP2: (55.152,129.290,0.278)
C3': (51.443,126.115,1.831)
C1': (52.856,124.277,1.443)
C5': (51.991,127.182,-0.429)
O6: (58.197,124.712,4.160)
O4': (52.667,124.944,0.204)
C8: (54.833,125.847,1.745)
C2: (55.665,122.213,4.032)
C6: (57.124,124.179,3.847)
C5: (56.088,124.693,3.018)
C4: (54.971,123.913,2.790)
P: (54.024,128.882,-0.598)
C4': (51.605,125.930,0.330)
C2': (51.717,124.715,2.363)
O2': (50.623,123.835,2.206)
N1: (56.815,122.907,4.321)
N2: (55.552,121.001,4.583)
N3: (54.696,122.676,3.259)
N7: (55.986,125.909,2.354)
N9: (54.164,124.663,1.967)
O5': (53.153,127.796,0.180)
O3': (50.163,126.629,2.186)
OP2: (55.152,129.290,0.278)
C3': (51.443,126.115,1.831)
C1': (52.856,124.277,1.443)
C5': (51.991,127.182,-0.429)
O6: (58.197,124.712,4.160)
O4': (52.667,124.944,0.204)
C8: (54.833,125.847,1.745)
C2: (55.665,122.213,4.032)
C6: (57.124,124.179,3.847)
C5: (56.088,124.693,3.018)
C4: (54.971,123.913,2.790)
P: (54.024,128.882,-0.598)
C4': (51.605,125.930,0.330)
C2': (51.717,124.715,2.363)
O2': (50.623,123.835,2.206)
N1: (56.815,122.907,4.321)
N2: (55.552,121.001,4.583)
N3: (54.696,122.676,3.259)
N7: (55.986,125.909,2.354)
N9: (54.164,124.663,1.967)
O5': (53.153,127.796,0.180)
O3': (50.163,126.629,2.186)
OP1: (57.853,123.229,13.866)
OP2: (57.368,125.744,13.665)
C3': (58.665,123.592,8.701)
C1': (57.364,124.999,7.329)
C5': (58.083,125.214,10.630)
O6: (55.169,129.842,4.578)
O4': (56.774,125.030,8.611)
C8: (58.002,127.371,6.644)
C2: (53.916,126.590,5.312)
C6: (55.168,128.683,5.015)
C5: (56.206,127.992,5.689)
C4: (55.983,126.694,6.094)
P: (57.443,124.396,13.044)
C4': (57.597,124.281,9.543)
C2': (58.818,124.578,7.543)
O2': (59.369,124.027,6.364)
N1: (54.036,127.886,4.867)
N2: (52.743,125.984,5.074)
N3: (54.875,125.938,5.942)
N7: (57.482,128.406,6.042)
N9: (57.140,126.301,6.713)
O5': (58.438,124.466,11.802)
O3': (58.120,122.339,8.268)
OP2: (57.368,125.744,13.665)
C3': (58.665,123.592,8.701)
C1': (57.364,124.999,7.329)
C5': (58.083,125.214,10.630)
O6: (55.169,129.842,4.578)
O4': (56.774,125.030,8.611)
C8: (58.002,127.371,6.644)
C2: (53.916,126.590,5.312)
C6: (55.168,128.683,5.015)
C5: (56.206,127.992,5.689)
C4: (55.983,126.694,6.094)
P: (57.443,124.396,13.044)
C4': (57.597,124.281,9.543)
C2': (58.818,124.578,7.543)
O2': (59.369,124.027,6.364)
N1: (54.036,127.886,4.867)
N2: (52.743,125.984,5.074)
N3: (54.875,125.938,5.942)
N7: (57.482,128.406,6.042)
N9: (57.140,126.301,6.713)
O5': (58.438,124.466,11.802)
O3': (58.120,122.339,8.268)
Image (generated by PyMOL):